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1.7k
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Answer: Answer: Difference in .bed target region base count and mapped base count for different
4.0 years ago by Pablo Marin-Garcia ★ 2.0k
4
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4.4k
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Answer: A: How to edit fasta headers to keep only ID and organism?
5.0 years ago by Pablo Marin-Garcia ★ 2.0k
20
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2
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38k
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Answer: A: Samtools And Region List
updated 5.5 years ago by 45k • written 11.6 years ago by ★ 2.0k
1
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0
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5.6k
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Answer: A: Please Help Me Check My Workflow For Paired-End Sequencing
updated 5.8 years ago by 45k • written 12.4 years ago by ★ 2.0k
1
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Comment: C: Should General Programming Questions Actually Be Posted To Biostar?
updated 6.0 years ago by 45k • written 14.2 years ago by ★ 2.0k
1
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0
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5.3k
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Comment: C: Could You Trust The Bam Header So:Coordinate?
updated 6.0 years ago by 45k • written 14.3 years ago by ★ 2.0k
1
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Comment: C: Is The Bwa Reference Indexing The Same Thing That Fasta Indexing With Samtools?
updated 6.0 years ago by 45k • written 14.3 years ago by ★ 2.0k
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4.9k
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Comment: C: Given A Fastq File, Is It Possible To Know If It Comes From Paired Or Single End
updated 6.0 years ago by 45k • written 14.3 years ago by ★ 2.0k
0
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2
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Answer: A: Interpretation Of Consensus Sequence From Samtools Pileup
updated 6.0 years ago by 45k • written 13.8 years ago by ★ 2.0k
3
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2
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6.3k
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Answer: A: Running Casava Under Ubuntu 11.04
updated 6.0 years ago by 45k • written 13.9 years ago by ★ 2.0k
0
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0
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5.3k
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Answer: A: Could You Trust The Bam Header So:Coordinate?
updated 6.0 years ago by 45k • written 14.1 years ago by ★ 2.0k
0
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0
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7.5k
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Answer: A: Fisher Strand in GATK, a good measure to detect Strand Bias?
6.0 years ago by Pablo Marin-Garcia ★ 2.0k
2
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0
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17k
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Answer: A: Bwa Index On All Human Grch37 Sequences
updated 6.0 years ago by 45k • written 14.3 years ago by ★ 2.0k
2
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0
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17k
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Comment: C: Bwa Index On All Human Grch37 Sequences
updated 6.0 years ago by 45k • written 14.3 years ago by ★ 2.0k
12
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1
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26k
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Answer: A: Calculation of VAF (variant allele frequency)
6.2 years ago by Pablo Marin-Garcia ★ 2.0k
9
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5
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4.4k
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1000 Genomes Human Reference Assembly File With Non Actgn Chars In Chr 3, Why?
genome human
updated 6.9 years ago by 20 • written 14.2 years ago by ★ 2.0k
2
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0
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131k
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Comment: C: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
8.8 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
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5.9k
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Answer: A: Sequence Clustering Based On Similarity
8.9 years ago by Pablo Marin-Garcia ★ 2.0k
1
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0
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8.5k
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Answer: Answer: Add Dp Tag To Genotype Field Of Vcf File
updated 3.2 years ago by 45k • written 9.6 years ago by ★ 2.0k
0
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0
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8.2k
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Comment: Comment: get biotype for refseq NM transcripts
updated 2.9 years ago by 45k • written 10.2 years ago by ★ 2.0k
0
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1
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8.2k
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Comment: C: get biotype for refseq NM transcripts
10.2 years ago by Pablo Marin-Garcia ★ 2.0k
0
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1
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8.2k
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Comment: C: get biotype for refseq NM transcripts
10.2 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
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8.2k
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Comment: Comment: get biotype for refseq NM transcripts
updated 2.9 years ago by 45k • written 10.2 years ago by ★ 2.0k
1
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2
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8.2k
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Comment: C: get biotype for refseq NM transcripts
10.2 years ago by Pablo Marin-Garcia ★ 2.0k
1
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0
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8.2k
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Comment: C: get biotype for refseq NM transcripts
10.2 years ago by Pablo Marin-Garcia ★ 2.0k
21
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15
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8.2k
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get biotype for refseq NM transcripts
refseq
updated 2.9 years ago by 45k • written 10.2 years ago by ★ 2.0k
12
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3
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7.3k
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Why Import Command In Samtools Is Not Shown In The Short Help Of Samtools?
samtools
updated 10.4 years ago by 20 • written 14.2 years ago by ★ 2.0k
14
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8
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7.0k
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Is Zlib Library Failing To Process Properly Bgzip Files?
vcf
updated 4.5 years ago by 45k • written 11.6 years ago by ★ 2.0k
9
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1
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6.6k
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Answer: Answer: How to find all miRNA locations in on GRch37 ?
updated 3.6 years ago by 45k • written 11.0 years ago by ★ 2.0k
0
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0
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3.5k
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Comment: Comment: biomart xml queries: where do you specify the genome build (or ensembl version)
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 2.0k
3
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2
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3.5k
views
biomart xml queries: where do you specify the genome build (or ensembl version) you want to use?
biomart ensembl
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 2.0k
0
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0
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7.0k
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Comment: C: Is Zlib Library Failing To Process Properly Bgzip Files?
11.6 years ago by Pablo Marin-Garcia ★ 2.0k
0
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1
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7.0k
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Comment: C: Is Zlib Library Failing To Process Properly Bgzip Files?
updated 4.5 years ago by 45k • written 11.6 years ago by ★ 2.0k
0
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1
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7.0k
views
Comment: C: Is Zlib Library Failing To Process Properly Bgzip Files?
updated 4.5 years ago by 45k • written 11.6 years ago by ★ 2.0k
1
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0
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38k
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Comment: C: Samtools And Region List
11.6 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
replies
2.5k
views
How To Either Converting Fastq To Srf Or Subselecting Reads From A Srf File?
next-gen sequencing fastq
updated 11.6 years ago by 20 • written 13.7 years ago by ★ 2.0k
3
votes
0
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4.0k
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Comment: C: Why Chr17 Does Not Have Telomeres?
12.1 years ago by Pablo Marin-Garcia ★ 2.0k
4
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0
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5.8k
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Answer: A: I Work A Lot With Table-Like Structures, Should I Learn Sql?
12.1 years ago by Pablo Marin-Garcia ★ 2.0k
1
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0
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8.2k
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Answer: A: Short Read Aligners/ Snp Calling Comparison
12.1 years ago by Pablo Marin-Garcia ★ 2.0k
4
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1
reply
22k
views
Answer: A: Converting Bcl To Fastq
12.3 years ago by Pablo Marin-Garcia ★ 2.0k
0
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1
reply
13k
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Comment: C: Newbler Download
12.8 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
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4.5k
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Comment: C: Delet Some Raw In Map File And Corosponed Coloum In Ped File In Linux
12.8 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
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4.5k
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Comment: C: Delet Some Raw In Map File And Corosponed Coloum In Ped File In Linux
12.8 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
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16k
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Answer: A: How To Get A List Of All Correlated Snps (In Ld) With Another List Of Snps?
12.8 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
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4.5k
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Answer: A: Delet Some Raw In Map File And Corosponed Coloum In Ped File In Linux
12.8 years ago by Pablo Marin-Garcia ★ 2.0k
6
votes
0
replies
91k
views
Answer: A: Piping With Samtools, Bwa And Bedtools
13.0 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
replies
22k
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Comment: C: Converting Bcl To Fastq
13.2 years ago by Pablo Marin-Garcia ★ 2.0k
1
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0
replies
4.5k
views
Comment: C: Casava1.8.2: One Barcode Per Lane Does Not Work?
13.3 years ago by Pablo Marin-Garcia ★ 2.0k
8
votes
0
replies
14k
views
Answer: A: Discrepancy Between Ld And R-Sq
13.4 years ago by Pablo Marin-Garcia ★ 2.0k
0
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0
replies
2.8k
views
Comment: C: Could Flicker (Illumina Mirna-Seq Analyzer Tool) Report Counts As Raw Counts Ins
13.5 years ago by Pablo Marin-Garcia ★ 2.0k
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