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Comment: C: RNA-SeQC error no output
updated 20 months ago by 34k • written 6.4 years ago by ▴ 330
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0
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6.4k
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Comment: C: featureCounts isoform vs gene summarization
updated 21 months ago by 34k • written 5.8 years ago by ▴ 330
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1
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6.4k
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Answer: A: featureCounts isoform vs gene summarization
updated 21 months ago by 34k • written 5.8 years ago by ▴ 330
4
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0
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9.6k
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Answer: A: featureCounts exon counting problem
updated 21 months ago by 34k • written 5.8 years ago by ▴ 330
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0
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4.7k
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Answer: A: questions about TruSeq Adapter
updated 22 months ago by 34k • written 5.9 years ago by ▴ 330
1
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1
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3.2k
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Answer: A: txt file to bigwig
updated 22 months ago by 34k • written 5.9 years ago by ▴ 330
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0
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2.8k
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Answer: A: Splicing programs to find alternative polyadenylation
updated 22 months ago by 34k • written 5.9 years ago by ▴ 330
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3.2k
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Comment: C: txt file to bigwig
updated 22 months ago by 34k • written 5.9 years ago by ▴ 330
0
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1
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3.8k
views
Comment: C: GFFutils very slow at creating database file. Any Idea why..?
updated 22 months ago by 34k • written 6.2 years ago by ▴ 330
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0
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3.8k
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Comment: C: GFFutils very slow at creating database file. Any Idea why..?
updated 22 months ago by 34k • written 6.2 years ago by ▴ 330
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0
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3.8k
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Comment: C: GFFutils very slow at creating database file. Any Idea why..?
updated 22 months ago by 34k • written 6.2 years ago by ▴ 330
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0
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3.2k
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Comment: C: Assembling a chromosome for an E. coli strain using contigs/scaffolds from two W
updated 22 months ago by 34k • written 6.2 years ago by ▴ 330
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1
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2.0k
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Answer: A: RNASeqQC - Low number of genes detected on run
updated 23 months ago by 34k • written 6.3 years ago by ▴ 330
0
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1
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1.7k
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Comment: C: mm9 RNA-seq reference genome
3.0 years ago by Kirill Tsyganov ▴ 330
1
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0
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2.4k
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Comment: C: How to create PCA plot and heatmaps using only significant genes in edgeR ?
3.0 years ago by Kirill Tsyganov ▴ 330
2
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0
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1.4k
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Comment: C: EdgeR analysis with different biological replicates numbers problem
3.0 years ago by Kirill Tsyganov ▴ 330
16
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11
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11k
views
SAMtools mpileup and bcftools doesn't call InDels...
SNP INDELs samtools mpileup variants calling
updated 10 weeks ago by 34k • written 6.3 years ago by ▴ 330
0
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0
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11k
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Comment: C: SAMtools mpileup and bcftools doesn't call InDels...
4.5 years ago by Kirill Tsyganov ▴ 330
0
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0
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1.3k
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Comment: C: Observed and expected fastq header count different when merging two fastq files
5.9 years ago by Kirill Tsyganov ▴ 330
0
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1
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3.8k
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Comment: C: GFFutils very slow at creating database file. Any Idea why..?
6.1 years ago by Kirill Tsyganov ▴ 330
2
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10
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3.8k
views
GFFutils very slow at creating database file. Any Idea why..?
gffutils gff
updated 6.2 years ago by 4.9k • written 6.2 years ago by ▴ 330
0
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1
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3.8k
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Comment: C: GFFutils very slow at creating database file. Any Idea why..?
6.2 years ago by Kirill Tsyganov ▴ 330
0
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1
reply
11k
views
Comment: C: SAMtools mpileup and bcftools doesn't call InDels...
6.3 years ago by Kirill Tsyganov ▴ 330
0
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1
reply
11k
views
Comment: C: SAMtools mpileup and bcftools doesn't call InDels...
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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5.3k
views
Comment: C: Error in SNP calling using samtools and bcftools
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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1.8k
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Comment: C: Where to get human 3'-UTR multiple sequence alignment ?
6.3 years ago by Kirill Tsyganov ▴ 330
0
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1
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1.6k
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Comment: C: Reporting alleles sequences for Amplicon sequencing after variant calling
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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2.0k
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Comment: C: RNASeqQC - Low number of genes detected on run
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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3.0k
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Comment: C: How do I load more than 200 nucleotide EST sequences into fasta files from NCBI
6.3 years ago by Kirill Tsyganov ▴ 330
0
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1
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3.0k
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Comment: C: How do I load more than 200 nucleotide EST sequences into fasta files from NCBI
6.3 years ago by Kirill Tsyganov ▴ 330
0
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1
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2.7k
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Comment: C: BWA-mem read mapping depends on chromosome order
6.3 years ago by Kirill Tsyganov ▴ 330
1
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1
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3.0k
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Comment: C: How do I load more than 200 nucleotide EST sequences into fasta files from NCBI
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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3.3k
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Comment: C: Obtaining sequence from Bioproject IDs using biopython gives unknown sequence
6.3 years ago by Kirill Tsyganov ▴ 330
0
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1
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3.3k
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Answer: A: Obtaining sequence from Bioproject IDs using biopython gives unknown sequence
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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5.8k
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Comment: C: Samtools mpileup quality scores all zero
6.3 years ago by Kirill Tsyganov ▴ 330
3
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2
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5.8k
views
Answer: A: Samtools mpileup quality scores all zero
6.3 years ago by Kirill Tsyganov ▴ 330
2
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1
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5.4k
views
Answer: A: Where to Download & File Format of Reference Gene Annotation for C. elegans WS22
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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3.4k
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Comment: C: How to annotate a VCF with Entrez Gene IDs
6.3 years ago by Kirill Tsyganov ▴ 330
0
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0
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2.2k
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Comment: C: Filter paired reads from samtools
6.4 years ago by Kirill Tsyganov ▴ 330
0
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1
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2.2k
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Comment: C: Filter paired reads from samtools
6.4 years ago by Kirill Tsyganov ▴ 330
0
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0
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3.6k
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Comment: C: Python: How to find coordinates of short sequences in a FASTA file?
6.4 years ago by Kirill Tsyganov ▴ 330
0
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0
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6.2k
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Comment: C: GTF format: isn't the tag "transcript_id" mandatory?
updated 6.4 years ago by 22k • written 6.4 years ago by ▴ 330
4
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1
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6.2k
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Answer: A: Ensemble GTF format: isn't the tag "transcript_id" mandatory?
6.4 years ago by Kirill Tsyganov ▴ 330
0
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0
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2.1k
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Comment: C: Pairwise Alignment, Biopython : Bio.pairwise2
6.4 years ago by Kirill Tsyganov ▴ 330
0
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0
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2.1k
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Comment: C: Pairwise Alignment, Biopython : Bio.pairwise2
6.4 years ago by Kirill Tsyganov ▴ 330
5
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0
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4.1k
views
Answer: A: Gff to fasta: Sort and extract sub-feature sequences from fasta in python
6.4 years ago by Kirill Tsyganov ▴ 330
1
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0
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6.2k
views
Comment: C: Ensemble GTF format: isn't the tag "transcript_id" mandatory?
6.4 years ago by Kirill Tsyganov ▴ 330
0
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1
reply
6.2k
views
Comment: C: GTF format: isn't the tag "transcript_id" mandatory?
6.4 years ago by Kirill Tsyganov ▴ 330
0
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1
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5.8k
views
Answer: A: RNA-SeQC error no output
6.4 years ago by Kirill Tsyganov ▴ 330
3
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2
replies
6.5k
views
What is the best practice for BAM sorting?
Forum STAR samtools RNA-Seq
updated 6 months ago by 34k • written 6.5 years ago by ▴ 330
51 results • Page 1 of 2
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