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answers
2
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2
replies
442
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Answer:
Answer: Extracting single chromosome from WGS cram/bam files before downloading
7 weeks ago by
GenoMax
148k
0
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0
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238
views
Answer:
Answer: Merging BAM files after alignment or restarting the workflow?
7 weeks ago by
GenoMax
148k
2
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1
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408
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Answer:
Answer: Can anyone share with me the R code for GSEA analysis?
9 weeks ago by
GenoMax
148k
0
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0
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396
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Answer:
Answer: extracting reads from FASTA/FASTQ file
9 weeks ago by
GenoMax
148k
0
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0
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265
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Answer:
Answer: Getting data from Ensembl using Python
9 weeks ago by
GenoMax
148k
3
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1
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580
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Answer:
Answer: Genome Assembly Sorting
9 weeks ago by
GenoMax
148k
0
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1
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539
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Answer:
Answer: how to find the number of exome bases covered in bam file
9 weeks ago by
GenoMax
148k
2
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1
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1.1k
views
Answer:
Answer: SRAtoolkit --split-files output
9 weeks ago by
GenoMax
148k
4
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1
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555
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Answer:
Answer: Using BBtools to remove polyGs in Illumina data
10 weeks ago by
GenoMax
148k
4
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2
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926
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Answer:
Answer: The Evolution of NGS: What’s New and What’s Next?
10 weeks ago by
GenoMax
148k
2
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1
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364
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Answer:
Answer: Numreads from samtools for Differential Expression
10 weeks ago by
GenoMax
148k
1
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1
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713
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Answer:
Answer: FastQC and HISAT2
10 weeks ago by
GenoMax
148k
0
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2
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390
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Answer:
Answer: BaseRecalibrator User error.
11 weeks ago by
GenoMax
148k
2
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0
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357
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Answer:
Answer: GC content files download
11 weeks ago by
GenoMax
148k
2
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0
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317
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Answer:
Answer: Filtering Fastq based on GC content
11 weeks ago by
GenoMax
148k
1
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1
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471
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Answer:
Answer: Trim galore error - directory completely empty
11 weeks ago by
GenoMax
148k
1
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0
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254
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Answer:
Answer: How to find overlapping regions of a gene and 18s rRNA sequences for mouse
11 weeks ago by
GenoMax
148k
5
votes
1
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396
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Answer:
Answer: golden genome NA12878
11 weeks ago by
GenoMax
148k
1
vote
2
replies
553
views
Answer:
Answer: Problem while using Tophat 2.1.0 to search gene fusions
11 weeks ago by
GenoMax
148k
2
votes
1
reply
427
views
Answer:
Answer: index sequence in fastq header
12 weeks ago by
GenoMax
148k
1
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1
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467
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Answer:
Answer: What companies do you recommend for targeted sequencing?
12 weeks ago by
GenoMax
148k
1
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1
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871
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Answer:
Answer: Seeking Advice: Best Network-based Backup Solutions (NAS or Alternatives) for a
12 weeks ago by
GenoMax
148k
2
votes
1
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705
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Answer:
Answer: Error Code 3 with fastq-dump
3 months ago by
GenoMax
148k
1
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0
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339
views
Answer:
Answer: Quality check pipeline for PCR cDNA ONT sequencing output.
3 months ago by
GenoMax
148k
3
votes
1
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301
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Answer:
Answer: Assistance with Identifying Human Orthologs of Catle SNPs
3 months ago by
GenoMax
148k
3
votes
0
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511
views
Answer:
Answer: Chemistry Detection Error in CellRanger for Single-Cell RNA-Seq Data
3 months ago by
GenoMax
148k
0
votes
1
reply
927
views
Answer:
Answer: Core_nt database not available to download?
3 months ago by
GenoMax
148k
1
vote
1
reply
667
views
Answer:
Answer: How to check coverage in bam file?
3 months ago by
GenoMax
148k
1
vote
1
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336
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Answer:
Answer: Analyzing RNA-seq data with Salmon
3 months ago by
GenoMax
148k
0
votes
1
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438
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Answer:
Answer: Convert "Locus Tag" to a RefSeq ID or ENSEMBL ID
3 months ago by
GenoMax
148k
0
votes
1
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473
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Answer:
Answer: Adapter trimming WGS Illumina DNA PCR free kit with BBduk
3 months ago by
GenoMax
148k
2
votes
0
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585
views
Answer:
Answer: are illumina fastq files typically split by lane?
3 months ago by
GenoMax
148k
2
votes
0
replies
347
views
Answer:
Answer: Quality check in long read (ONT, PacBio) bam files
3 months ago by
GenoMax
148k
5
votes
0
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1.1k
views
Answer:
Answer: Downloading paired end fastq data from SRA
3 months ago by
GenoMax
148k
2
votes
1
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427
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Answer:
Answer: Only two fastqs for 10X scATAC-seq data deposited on GEO database.
3 months ago by
GenoMax
148k
1
vote
1
reply
720
views
Answer:
Answer: Download files from Experiment Acession
3 months ago by
GenoMax
148k
2
votes
1
reply
343
views
Answer:
Answer: Hard filtering to reduce false positive variants due to poly track sequences
3 months ago by
GenoMax
148k
0
votes
0
replies
240
views
Answer:
Answer: Redundant Database for BLAST search
3 months ago by
GenoMax
148k
1
vote
1
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606
views
Answer:
Answer: How to create a tax_id_map file for getting scientific names in BLASTN output
3 months ago by
GenoMax
148k
2
votes
0
replies
293
views
Answer:
Answer: Reference source that provides IRIs for Ensembl gene IDs?
4 months ago by
GenoMax
148k
1
vote
1
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297
views
Answer:
Answer: Remove especific reads from a metagenomic sequencing run
4 months ago by
GenoMax
148k
1
vote
1
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486
views
Answer:
Answer: Any recommended way to share ChIP track to collaborator through UCSC browser wit
4 months ago by
GenoMax
148k
1
vote
1
reply
407
views
Answer:
Answer: How can I find fasta sequences for gp120 and gp41?
4 months ago by
GenoMax
148k
1
vote
0
replies
584
views
Answer:
Answer: Demultiplex fastq sequences based on sequence header
4 months ago by
GenoMax
148k
1
vote
1
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594
views
Answer:
Answer: How to convert .sdf files into .sdf.gz?
4 months ago by
GenoMax
148k
1
vote
1
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325
views
Answer:
Answer: homo sapiens.vcf
4 months ago by
GenoMax
148k
0
votes
0
replies
39k
views
Answer:
Answer: How To Extract Set Of Reads From Fastq (Or Eventually Fasta And Qual) Based On L
4 months ago by
GenoMax
148k
2
votes
2
replies
1.1k
views
Answer:
Answer: What bioinformatics codes would you use for performance benchmarking on a new sy
4 months ago by
GenoMax
148k
1
vote
2
replies
552
views
Answer:
Answer: Different strandedness from HISAT2 and STAR alignment
4 months ago by
GenoMax
148k
3
votes
1
reply
416
views
Answer:
Answer: Clarification on Reference Version in GATK Resource Bundle
4 months ago by
GenoMax
148k
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