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1
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8
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2.1k
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trimming more than two paired mates
trim fastq
9.0 years ago by igor 13k
3
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0
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3.9k
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Answer: A: Anyone knows mutation pipeline for cbioportal?
9.0 years ago by igor 13k
0
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0
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5.8k
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Comment: C: Normalized read density
9.0 years ago by igor 13k
2
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0
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3.4k
views
Answer: A: No qual scores in VCF
9.0 years ago by igor 13k
0
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1
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5.8k
views
Answer: A: Normalized read density
9.0 years ago by igor 13k
2
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0
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2.4k
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Answer: A: Using 2 different references in my pipeline
9.0 years ago by igor 13k
0
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1
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6.3k
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Comment: C: Call variant from RNA-Seq data using Haplotypecaller
9.0 years ago by igor 13k
0
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2
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6.3k
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Comment: C: Call variant from RNA-Seq data using Haplotypecaller
9.0 years ago by igor 13k
1
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0
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5.7k
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Comment: C: fastqc and coverage
9.1 years ago by igor 13k
0
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1
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5.7k
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Comment: C: fastqc and coverage
9.1 years ago by igor 13k
0
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1
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3.0k
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Answer: A: Other ways to get allele frequencies for specific chromosome positions apart fro
9.1 years ago by igor 13k
0
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0
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3.4k
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Comment: C: Detection of (novel) lnc-RNAs in 'normal' RNA-Seq data
9.1 years ago by igor 13k
0
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1
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2.1k
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Answer: A: minfi package, DMRs,
9.1 years ago by igor 13k
0
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0
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6.7k
views
Answer: A: PhD programs in bioinformatics and genomics
9.1 years ago by igor 13k
0
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0
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12k
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Comment: C: What is the most popular file format for storing sequence alignments and associa
9.1 years ago by igor 13k
1
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0
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2.7k
views
Comment: C: long non coding RNA
9.1 years ago by igor 13k
0
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2
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12k
views
Answer: A: What is the most popular file format for storing sequence alignments and associa
9.1 years ago by igor 13k
2
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1
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2.7k
views
Answer: A: long non coding RNA
9.1 years ago by igor 13k
1
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0
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1.9k
views
Answer: A: De Novo assembly?
9.1 years ago by igor 13k
0
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0
replies
20k
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Answer: A: How to calculate TPM?
9.1 years ago by igor 13k
1
vote
1
reply
16k
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Comment: C: What is the reason for trimming reads to 30 bp for ATAC-seq aligning?
9.1 years ago by igor 13k
1
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1
reply
4.0k
views
BLASTing long sequence
blast
updated 9.1 years ago by 45k • written 9.1 years ago by 13k
1
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0
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6.7k
views
Comment: C: STAR is taking a LONG time to generate mouse genome
9.1 years ago by igor 13k
0
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0
replies
16k
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Comment: C: What is the reason for trimming reads to 30 bp for ATAC-seq aligning?
9.1 years ago by igor 13k
2
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1
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16k
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Comment: C: What is the reason for trimming reads to 30 bp for ATAC-seq aligning?
9.1 years ago by igor 13k
0
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0
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7.5k
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Comment: C: How to select top significant ChiPseq peaks from MACS2 output file
9.1 years ago by igor 13k
4
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1
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7.5k
views
Answer: A: How to select top significant ChiPseq peaks from MACS2 output file
9.1 years ago by igor 13k
1
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0
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3.2k
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Comment: C: GSEA heatmap for all genes?
9.1 years ago by igor 13k
0
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0
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2.7k
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Answer: A: Crab eating macaque (M. fascicularis) transcriptome GTF file
9.1 years ago by igor 13k
0
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0
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2.1k
views
Comment: C: Is there a term for a genome assembly that is not closed?
9.1 years ago by igor 13k
6
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6
replies
2.1k
views
Is there a term for a genome assembly that is not closed?
Assembly genome
updated 9.1 years ago by 8.1k • written 9.1 years ago by 13k
0
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0
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3.4k
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Comment: C: How to interprate variant annotation?
9.1 years ago by igor 13k
0
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2
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3.4k
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Comment: C: How to interprate variant annotation?
9.1 years ago by igor 13k
0
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1
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3.3k
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Answer: A: Mapping hundreds of single reads to reference genome with bwa mem using shell sc
9.1 years ago by igor 13k
1
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1
reply
4.3k
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Answer: A: Counts from cuffdiff VS featurecounts
9.1 years ago by igor 13k
1
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0
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4.3k
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Comment: C: Counts from cuffdiff VS featurecounts
9.1 years ago by igor 13k
2
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3
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17k
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Answer: A: Online/remote/distance learning/ - partime/fulltime - PhD, Bioinformatics in USA
9.1 years ago by igor 13k
2
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1
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5.9k
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Comment: C: Vcf files fields: AD vs DP4
9.1 years ago by igor 13k
1
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0
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10k
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Answer: A: R package "tsne" and "Rtsne" give different cell clustering results
9.1 years ago by igor 13k
1
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0
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8.1k
views
Comment: C: genome assembly software
9.1 years ago by igor 13k
0
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0
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8.1k
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Comment: C: genome assembly software
9.1 years ago by igor 13k
1
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0
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3.2k
views
Answer: A: New to the field...how to work with .SRA files?
9.1 years ago by igor 13k
1
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0
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6.0k
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Comment: C: Is Sleuth a good package?
9.1 years ago by igor 13k
1
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0
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6.0k
views
Comment: C: Is Sleuth a good package?
9.1 years ago by igor 13k
6
votes
0
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13k
views
Answer: A: What is the exact definition for scaffold?
9.1 years ago by igor 13k
2
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0
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6.0k
views
Comment: C: Is Sleuth a good package?
9.1 years ago by igor 13k
0
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1
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6.0k
views
Comment: C: Is Sleuth a good package?
9.1 years ago by igor 13k
2
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1
reply
5.9k
views
Answer: A: Vcf files fields: AD vs DP4
9.1 years ago by igor 13k
1
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0
replies
5.2k
views
Answer: A: Lollipop Plot of Variant Locations
9.1 years ago by igor 13k
3
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1
reply
4.0k
views
Answer: A: Comparing the output from DESeq and DESeq2
9.1 years ago by igor 13k
1,531 results • Page 22 of 31
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