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Where can I find tumour-normal pairs public data sets
public-data tumour-normal
updated 3.3 years ago by 45k • written 10.0 years ago by ▴ 60
3
votes
2
replies
5.1k
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Batch effects in sequencing data
batch-effect
updated 19 months ago by 45k • written 10.3 years ago by ▴ 60
8
votes
5
replies
4.5k
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Is it possible to guess sequencing platform used based on a FASTQ/BAM file?
BAM FASTQ
updated 2.9 years ago by 45k • written 10.4 years ago by ▴ 60
6
votes
6
replies
3.3k
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Generate percent of bases with quality > x from BAM file
bam
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 60
0
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2
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3.3k
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Comment: C: Generate percent of bases with quality > x from BAM file
10.3 years ago by Andrew ▴ 60
1
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2
replies
4.4k
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How are expected error rates calculated?
expected error rate BAM
10.4 years ago by Andrew ▴ 60
7
votes
4
replies
6.6k
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Find reference base for a position in a given read from a BAM file
BAM
updated 3.0 years ago by 45k • written 10.4 years ago by ▴ 60
1
vote
1
reply
6.6k
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Answer: Answer: Find reference base for a position in a given read from a BAM file
updated 3.0 years ago by 45k • written 10.4 years ago by ▴ 60
12
votes
9
replies
8.2k
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Substitution error rate and indel error rate from BAM file
Indel Substitution Error-rate BAM
updated 3.0 years ago by 45k • written 10.4 years ago by ▴ 60
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