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featureCounts parameters for RNA-Seq
featurecounts RNA-Seq Subread ReadCounts
updated 3.9 years ago by • 0 • written 5.5 years ago by ▴ 50
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0
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17k
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Comment: C: Extracting regions from .bam file using a .gff or .gtf file
5.1 years ago by CuriusScientist ▴ 50
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1
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3.5k
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Comment: C: Different results from featureCounts using gene_id and gene_biotype
updated 5.5 years ago by 21k • written 5.5 years ago by ▴ 50
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3
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3.5k
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Different results from featureCounts using gene_id and gene_biotype
RNA-Seq featureCounts subread readcounts biotype
updated 5.5 years ago by 21k • written 5.5 years ago by ▴ 50
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0
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8.0k
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Comment: C: DESeq2 model design: dose and time effect
updated 5.6 years ago by 45k • written 9.9 years ago by ▴ 50
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1
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8.0k
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Comment: Comment: DESeq2 model design: dose and time effect
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 50
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0
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1.5k
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Low-coverage whole-genome sequencing (LC-WGS) or ultra low-pass WGS analysis
next-gen sequencing genome LC-WGS ichorCNA
updated 5.7 years ago by 20 • written 5.7 years ago by ▴ 50
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0
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14k
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Answer: A: Finding Variable Genes in Seurat, scRNA-seq
6.5 years ago by CuriusScientist ▴ 50
1
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0
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2.0k
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cBioPortal genetic profile id and mutational data analysis
cBioPortal GISTIC TCGA CNA Mutation Assessor
7.3 years ago by CuriusScientist ▴ 50
0
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6
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3.6k
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how to find a particular GEO dataset or cohort in cBioportal and TCGA
TCGA cBioportal GEO R GDAC
7.4 years ago by CuriusScientist ▴ 50
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1
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3.6k
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Comment: A: how to find a particular GEO dataset or cohort in cBioportal and TCGA
7.4 years ago by CuriusScientist ▴ 50
0
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0
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3.6k
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Comment: C: how to find a particular GEO dataset or cohort in cBioportal and TCGA
7.4 years ago by CuriusScientist ▴ 50
0
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1
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3.6k
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Comment: C: how to find a particular GEO dataset or cohort in cBioportal and TCGA
7.4 years ago by CuriusScientist ▴ 50
1
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1
reply
1.6k
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what is difference between preliminary somatic mutations, somatic mutations and validated somatic mutations
tcga cBioPortal somatic mutations
7.4 years ago by CuriusScientist ▴ 50
3
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2
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1.8k
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Confusion in Tophat2 input files
RNA-Seq tophat alignment
updated 8.7 years ago by 48k • written 8.7 years ago by ▴ 50
0
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1
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8.0k
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Comment: Comment: DESeq2 model design: dose and time effect
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 50
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0
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8.0k
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Comment: Comment: DESeq2 model design: dose and time effect
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 50
9
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8
replies
8.0k
views
DESeq2 model design: dose and time effect
RNA-Seq differential-expression deseq2
updated 2.7 years ago by 45k • written 9.9 years ago by ▴ 50
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