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7.6k
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featureCounts parameters for RNA-Seq
featurecounts RNA-Seq Subread ReadCounts
updated 4.3 years ago by • 0 • written 6.0 years ago by ▴ 50
0
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0
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17k
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Comment: C: Extracting regions from .bam file using a .gff or .gtf file
5.5 years ago by CuriusScientist ▴ 50
0
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1
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3.8k
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Comment: C: Different results from featureCounts using gene_id and gene_biotype
updated 6.0 years ago by 22k • written 6.0 years ago by ▴ 50
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3
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3.8k
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Different results from featureCounts using gene_id and gene_biotype
RNA-Seq featureCounts subread readcounts biotype
updated 6.0 years ago by 22k • written 6.0 years ago by ▴ 50
0
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0
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8.4k
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Comment: C: DESeq2 model design: dose and time effect
updated 6.0 years ago by 45k • written 10.3 years ago by ▴ 50
0
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1
reply
8.4k
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Comment: Comment: DESeq2 model design: dose and time effect
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 50
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0
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1.7k
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Low-coverage whole-genome sequencing (LC-WGS) or ultra low-pass WGS analysis
next-gen sequencing genome LC-WGS ichorCNA
updated 6.1 years ago by 20 • written 6.1 years ago by ▴ 50
0
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0
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15k
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Answer: A: Finding Variable Genes in Seurat, scRNA-seq
6.9 years ago by CuriusScientist ▴ 50
1
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0
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2.2k
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cBioPortal genetic profile id and mutational data analysis
cBioPortal GISTIC TCGA CNA Mutation Assessor
7.7 years ago by CuriusScientist ▴ 50
0
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6
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4.0k
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how to find a particular GEO dataset or cohort in cBioportal and TCGA
TCGA cBioportal GEO R GDAC
7.8 years ago by CuriusScientist ▴ 50
0
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1
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4.0k
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Comment: A: how to find a particular GEO dataset or cohort in cBioportal and TCGA
7.8 years ago by CuriusScientist ▴ 50
0
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0
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4.0k
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Comment: C: how to find a particular GEO dataset or cohort in cBioportal and TCGA
7.8 years ago by CuriusScientist ▴ 50
0
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1
reply
4.0k
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Comment: C: how to find a particular GEO dataset or cohort in cBioportal and TCGA
7.8 years ago by CuriusScientist ▴ 50
1
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1
reply
1.7k
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what is difference between preliminary somatic mutations, somatic mutations and validated somatic mutations
tcga cBioPortal somatic mutations
7.8 years ago by CuriusScientist ▴ 50
3
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2
replies
1.9k
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Confusion in Tophat2 input files
RNA-Seq tophat alignment
updated 9.1 years ago by 48k • written 9.1 years ago by ▴ 50
0
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1
reply
8.4k
views
Comment: Comment: DESeq2 model design: dose and time effect
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 50
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0
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8.4k
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Comment: Comment: DESeq2 model design: dose and time effect
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 50
9
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8
replies
8.4k
views
DESeq2 model design: dose and time effect
RNA-Seq differential-expression deseq2
updated 3.1 years ago by 45k • written 10.3 years ago by ▴ 50
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