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Comment: C: quality filtering error usearch
6.3 years ago by chen ★ 2.5k
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2.0k
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Answer: A: Minimum read length in Trimmomatic
6.3 years ago by chen ★ 2.5k
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2.7k
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Answer: A: Remove masked (N) based from reads in fastq library
6.3 years ago by chen ★ 2.5k
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2.0k
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Comment: C: RNA seq trimming
6.3 years ago by chen ★ 2.5k
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1
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3.2k
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Comment: C: Cutadapt using issue
6.4 years ago by chen ★ 2.5k
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6.0k
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Comment: C: Merge fastq reads for several samples
6.4 years ago by chen ★ 2.5k
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1.7k
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Answer: A: Varscan copynumber running problem
6.4 years ago by chen ★ 2.5k
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1.4k
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Answer: A: splitting daligner jobs
6.4 years ago by chen ★ 2.5k
2
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3.0k
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Answer: A: trimming of Rna seq
6.4 years ago by chen ★ 2.5k
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1
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3.4k
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Comment: C: get final output from Trimmomatic
6.4 years ago by chen ★ 2.5k
1
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1
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2.5k
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Comment: C: Rapid GC content increase at 3' end base on Illumina platform
6.4 years ago by chen ★ 2.5k
1
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1
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2.5k
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Comment: C: Rapid GC content increase at 3' end base on Illumina platform
6.4 years ago by chen ★ 2.5k
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1
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2.5k
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Comment: C: Rapid GC content increase at 3' end base on Illumina platform
6.4 years ago by chen ★ 2.5k
1
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1
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2.5k
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Answer: A: Rapid GC content increase at 3' end base on Illumina platform
6.4 years ago by chen ★ 2.5k
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0
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4.3k
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Answer: A: Visualize nucleotides for every position in R
6.4 years ago by chen ★ 2.5k
3
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2
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8.8k
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Tutorial: Use fastp to preprocess FASTQ data with unique molecular identifer (UMI) integrated
FASTQ UMI fastp
updated 11 months ago by 43k • written 6.4 years ago by ★ 2.5k
2
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1
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1.7k
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Comment: C: Solutions to FastQC diagnosis of Micro-Satellites
6.4 years ago by chen ★ 2.5k
0
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0
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12k
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Comment: C: Can Illumina bcl2fastq use only one index for demultiplexing dual index sequenci
6.4 years ago by chen ★ 2.5k
0
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1
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12k
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Comment: C: Can Illumina bcl2fastq use only one index for demultiplexing dual index sequenci
6.4 years ago by chen ★ 2.5k
1
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2
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12k
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Comment: C: Can Illumina bcl2fastq use only one index for demultiplexing dual index sequenci
6.4 years ago by chen ★ 2.5k
9
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12
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4.6k
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Tool: fastp v0.9 released: an all-in-one FASTQ preprocessor (QC, adapters, trimming, quality filtering / cutting, splitting output ... )
fastq fastp open-source
updated 10 months ago by 43k • written 6.5 years ago by ★ 2.5k
0
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0
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8.8k
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Comment: C: Use fastp to preprocess FASTQ data with unique molecular identifer (UMI) integra
6.4 years ago by chen ★ 2.5k
0
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0
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1.1k
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Comment: C: Questions on bioinformatics
6.4 years ago by chen ★ 2.5k
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0
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3.7k
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Answer: A: How to know which illumina adapters trimm using BCL files
6.4 years ago by chen ★ 2.5k
1
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0
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830
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Comment: C: Image processing of ultrasound images of goiter
6.4 years ago by chen ★ 2.5k
1
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0
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1.7k
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Answer: A: gene panel for cancers
6.4 years ago by chen ★ 2.5k
0
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0
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7.8k
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Comment: C: FastQC in R
6.4 years ago by chen ★ 2.5k
0
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0
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2.9k
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Comment: C: Separate the reverse sequence from R1 and corresponding forward seq from R2
6.4 years ago by chen ★ 2.5k
0
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1
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6.4k
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Comment: C: Error rate of Illumina MiSeq
6.4 years ago by chen ★ 2.5k
0
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1
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2.9k
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Comment: C: Separate the reverse sequence from R1 and corresponding forward seq from R2
6.4 years ago by chen ★ 2.5k
1
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2
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3.2k
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Answer: A: How about my parallel bwa+gatk pipeline?
6.4 years ago by chen ★ 2.5k
0
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0
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3.3k
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Comment: C: Trimming reads with prinseq
6.4 years ago by chen ★ 2.5k
2
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3.3k
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Answer: A: Trimming reads with prinseq
6.4 years ago by chen ★ 2.5k
0
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0
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7.0k
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Answer: A: How to extract reads with a known variant form a bam file
6.4 years ago by chen ★ 2.5k
0
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0
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4.6k
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Answer: A: My run over-clustered - what does this mean for the data?
6.4 years ago by chen ★ 2.5k
1
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0
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1.9k
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Answer: A: Illumina Adapter in R1 Only
6.4 years ago by chen ★ 2.5k
0
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0
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1.9k
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Comment: C: Remove hundreds of probes
6.4 years ago by chen ★ 2.5k
1
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1
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1.9k
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Answer: A: Remaining adapters ?
6.4 years ago by chen ★ 2.5k
0
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1
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1.9k
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Comment: C: Remove hundreds of probes
6.5 years ago by chen ★ 2.5k
0
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2
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2.7k
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Comment: A: NGS on cancer tumor
6.5 years ago by chen ★ 2.5k
1
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0
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2.7k
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Comment: C: NGS on cancer tumor
6.5 years ago by chen ★ 2.5k
0
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0
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2.7k
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Comment: C: NGS on cancer tumor
6.5 years ago by chen ★ 2.5k
0
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0
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3.0k
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Comment: C: error while using cutadapt
6.5 years ago by chen ★ 2.5k
0
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0
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1.9k
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Comment: C: Remove hundreds of probes
6.5 years ago by chen ★ 2.5k
2
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1
reply
3.0k
views
Answer: A: error while using cutadapt
6.5 years ago by chen ★ 2.5k
0
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2
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1.9k
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Answer: A: Remove hundreds of probes
6.5 years ago by chen ★ 2.5k
0
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0
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4.5k
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Comment: C: trimming PE RNA Reads
6.5 years ago by chen ★ 2.5k
0
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1
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4.5k
views
Answer: A: trimming PE RNA Reads
6.5 years ago by chen ★ 2.5k
0
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0
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31k
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Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
6.5 years ago by chen ★ 2.5k
0
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2
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4.6k
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Comment: C: Call for requirement: a fast all-in-one FASTQ preprocessor (in C++, multi-thread
6.5 years ago by chen ★ 2.5k
218 results • Page 2 of 5
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