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0
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4.5k
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Comment: C: Find overlapping blast hits and keep the highest evalue
5.6 years ago by Alex Reynolds 36k
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0
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2.1k
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Comment: C: Get intersection of files occuring in at least 2 files?
5.7 years ago by Alex Reynolds 36k
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0
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2.1k
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Comment: C: Get intersection of files occuring in at least 2 files?
5.7 years ago by Alex Reynolds 36k
4
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2
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7.7k
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Answer: A: How to generate start & end coordinates for each chromosome of human ref genome
5.7 years ago by Alex Reynolds 36k
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2
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2.1k
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Comment: C: Get intersection of files occuring in at least 2 files?
5.7 years ago by Alex Reynolds 36k
1
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1
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2.1k
views
Answer: A: Get intersection of files occuring in at least 2 files?
5.7 years ago by Alex Reynolds 36k
1
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1
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3.7k
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Comment: C: featureCounts does not summarise counts from added/reporter genes
5.7 years ago by Alex Reynolds 36k
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0
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4.3k
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Comment: C: TFBS enrichiment analysis
5.7 years ago by Alex Reynolds 36k
1
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0
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2.1k
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Comment: C: Identify TF binding motif for a given gene
5.7 years ago by Alex Reynolds 36k
3
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0
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6.3k
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Answer: Answer: Sliding window using gene position file
updated 2.8 years ago by 45k • written 10.6 years ago by 36k
0
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0
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2.0k
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Answer: A: bedops sort-bed inconsistencies
5.7 years ago by Alex Reynolds 36k
0
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1
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2.0k
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Comment: C: bedops sort-bed inconsistencies
5.7 years ago by Alex Reynolds 36k
1
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2
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2.0k
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Answer: A: bedops sort-bed inconsistencies
5.7 years ago by Alex Reynolds 36k
1
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0
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1.5k
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Comment: C: Uncharacterized transcription factor
5.7 years ago by Alex Reynolds 36k
0
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0
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2.8k
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Comment: C: How to blastn a very short query sequence? Identifying telomeres in assembly
5.7 years ago by Alex Reynolds 36k
2
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1
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2.0k
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Answer: A: ucsc ids conversion
5.7 years ago by Alex Reynolds 36k
3
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0
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3.4k
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Answer: A: Official gene symbol list to BED file
5.7 years ago by Alex Reynolds 36k
1
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0
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2.8k
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Answer: A: How to blastn a very short query sequence? Identifying telomeres in assembly
5.7 years ago by Alex Reynolds 36k
0
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0
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1.1k
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Answer: A: public file storage
5.8 years ago by Alex Reynolds 36k
1
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0
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1.4k
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Answer: A: Sequences alignment program
5.8 years ago by Alex Reynolds 36k
0
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0
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1.4k
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Comment: C: Sequences alignment program
5.8 years ago by Alex Reynolds 36k
0
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0
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4.9k
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Comment: C: How convert files .psl to files .bed?
5.8 years ago by Alex Reynolds 36k
0
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0
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6.3k
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Comment: C: multiple bed - merge regions IF overlapping more than xx percent of size
5.8 years ago by Alex Reynolds 36k
0
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0
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1.8k
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Comment: C: Converting peak ID to gene symbol
5.8 years ago by Alex Reynolds 36k
1
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1
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1.8k
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Comment: C: Converting peak ID to gene symbol
5.8 years ago by Alex Reynolds 36k
3
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1
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1.8k
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Answer: C: Converting peak ID to gene symbol
5.8 years ago by Alex Reynolds 36k
1
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1
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1.8k
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Comment: C: Converting peak ID to gene symbol
5.8 years ago by Alex Reynolds 36k
0
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0
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3.5k
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Comment: C: How to extend variable length intervals to the same final length?
5.9 years ago by Alex Reynolds 36k
3
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1
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25k
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Comment: C: Bed to BedGraph
updated 5.9 years ago by 45k • written 9.8 years ago by 36k
0
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1
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5.7k
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Answer: A: How to merge replicates in bed file, but keep counts of additional columns?
5.9 years ago by Alex Reynolds 36k
0
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2
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3.2k
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Answer: A: How to identify which genes fall within genomic locations
updated 5.9 years ago by 45k • written 9.8 years ago by 36k
0
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0
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11k
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Comment: C: how to use a bed file with htseq-count
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
1
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0
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2.4k
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Answer: A: find / score transcription factors based on motifs
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
2
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2
replies
11k
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Answer: A: how to use a bed file with htseq-count
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
3
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0
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1.9k
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Answer: A: Annotating gene ID and genomic features from bed files
5.9 years ago by Alex Reynolds 36k
1
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1
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2.8k
views
Answer: A: motif for TF within CTCF boundary
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
2
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1
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5.9k
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Answer: A: JASPAR, TFs and their target genes
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
0
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1
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2.4k
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Comment: C: How to align two strings with ambiguous alphabet using biopython?
5.9 years ago by Alex Reynolds 36k
0
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1
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2.3k
views
Comment: C: statistics method to find the relation between multiple variables of 50 samples
5.9 years ago by Alex Reynolds 36k
0
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0
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3.5k
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Answer: A: How to get karyotype information for a certain section of genome.
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
0
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0
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14k
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Answer: A: Samtools or Bedtools: How to filter a bam file with a bed file using strand info
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
0
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1
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3.2k
views
Comment: C: Mapping bed file to the ends of bed features of another file
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
2
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2
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3.2k
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Answer: C: Mapping bed file to the ends of bed features of another file
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
2
votes
0
replies
5.1k
views
Answer: A: Advantages of Biobase's TRANSFAC over and above what is freely available?
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
0
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1
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2.4k
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Answer: Answer: Sequence filtration based on length
updated 2.7 years ago by 45k • written 11.5 years ago by 36k
0
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1
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14k
views
Comment: C: How to generate a Venn diagram
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
0
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1
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14k
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Comment: C: How to generate a Venn diagram
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
0
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0
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2.6k
views
Answer: A: For a given set of coordinates is there a simple fast way of determining the 'su
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
0
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1
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19k
views
Answer: A: How To Randomly Sample A Subset Of Lines From A Bed File
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
3
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2
replies
16k
views
Answer: A: What is the best programming language for NGS data analysis pipeline development
updated 5.9 years ago by 45k • written 11.5 years ago by 36k
2,902 results • Page 11 of 59
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