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2
votes
1
reply
6.1k
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Answer: A: Can Bedtools/Bedops Used To Extract Regions Where Scores Are Higher Than A Given
updated 5.9 years ago by 45k • written 12.4 years ago by 36k
1
vote
1
reply
7.1k
views
Comment: C: Filtering Bed Files By Using Bedops
updated 5.9 years ago by 45k • written 12.4 years ago by 36k
1
vote
1
reply
11k
views
Answer: A: Overlapping And Unique Peaks In Chipseq
updated 5.9 years ago by 45k • written 12.5 years ago by 36k
1
vote
1
reply
3.7k
views
Answer: A: Statistical Representation Of Cpg Dinucleotides In Promoter Regions
updated 5.9 years ago by 45k • written 12.5 years ago by 36k
1
vote
1
reply
5.5k
views
Answer: A: How To Remove The Intronic Reads Before Counting
updated 5.9 years ago by 45k • written 12.5 years ago by 36k
0
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0
replies
4.2k
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Answer: A: How To Map Chromosome Coordinates To Ncbi Refseq
updated 5.9 years ago by 45k • written 12.6 years ago by 36k
4
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0
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18k
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Answer: A: Binning Of Chromosome Data
updated 5.9 years ago by 45k • written 12.6 years ago by 36k
2
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0
replies
6.0k
views
Answer: A: Chip-Seq Visualization Without Using Any Peak Caller
updated 5.9 years ago by 45k • written 12.6 years ago by 36k
2
votes
2
replies
13k
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Comment: C: Automating Gorilla And/Or Revigo Analysis
updated 5.9 years ago by 45k • written 12.6 years ago by 36k
4
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0
replies
3.3k
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Answer: A: Density Of 5' End Of Reads From Bam Averaged Over Bed File
updated 5.9 years ago by 45k • written 12.6 years ago by 36k
5
votes
1
reply
13k
views
Answer: A: Why Is Gzip Compression Of Fasta Less Efficient Than 2Bit?
updated 5.9 years ago by 45k • written 12.6 years ago by 36k
1
vote
2
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13k
views
Answer: A: Why Is Gzip Compression Of Fasta Less Efficient Than 2Bit?
updated 5.9 years ago by 45k • written 12.6 years ago by 36k
3
votes
1
reply
8.8k
views
Answer: A: Interleaving Records From More Than One Fasta File
updated 5.9 years ago by 45k • written 12.7 years ago by 36k
6
votes
1
reply
12k
views
Answer: A: Any Quick Sort Method For Large Bed File As 20G In Size?
updated 5.9 years ago by 45k • written 12.7 years ago by 36k
3
votes
0
replies
10.0k
views
Answer: A: Official Bed Vs Gff Coordinate Conventions?
updated 5.9 years ago by 45k • written 12.7 years ago by 36k
0
votes
1
reply
4.3k
views
Answer: A: Analyze Promoter Regions In A Vcf File
updated 5.9 years ago by 45k • written 12.7 years ago by 36k
6
votes
2
replies
13k
views
Answer: A: Binning Over Genes And Calculating The Coverage [Bedops/Bedmap]
updated 5.9 years ago by 45k • written 12.7 years ago by 36k
8
votes
2
replies
11k
views
Answer: A: Encode Commentary From Dan Graur
updated 5.9 years ago by 45k • written 12.8 years ago by 36k
3
votes
2
replies
37k
views
Answer: A: Converting Bam To Bedgraph For Viewing On Ucsc?
updated 5.9 years ago by 45k • written 12.8 years ago by 36k
1
vote
0
replies
158k
views
Comment: C: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.9 years ago by 45k • written 12.8 years ago by 36k
6
votes
2
replies
158k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.9 years ago by 45k • written 12.8 years ago by 36k
0
votes
1
reply
7.2k
views
Comment: C: Is Blat A Good Choice To Find 18Mers In A Custom Fasta File
updated 5.9 years ago by 45k • written 12.8 years ago by 36k
0
votes
1
reply
10k
views
Comment: C: How to Collapse Bedtools reciprocal overlap regions
5.9 years ago by Alex Reynolds 36k
6
votes
1
reply
17k
views
Answer: A: Sam To Bed File With Counter Column
updated 5.9 years ago by 45k • written 12.8 years ago by 36k
0
votes
1
reply
17k
views
Comment: C: Sam To Bed File With Counter Column
updated 5.9 years ago by 45k • written 12.8 years ago by 36k
2
votes
1
reply
2.7k
views
Answer: A: identifying which SNPs sit in TFBS (Yeast)
updated 5.9 years ago by 45k • written 9.9 years ago by 36k
4
votes
0
replies
5.9k
views
Answer: A: Getting All Reads That Align To A Region In Compact Bed Format Using Bedtools?
updated 5.9 years ago by 45k • written 12.9 years ago by 36k
1
vote
2
replies
4.5k
views
Answer: A: Gff2Bed.Py Stops
updated 5.9 years ago by 45k • written 12.9 years ago by 36k
0
votes
1
reply
3.7k
views
Answer: A: Appending Gene Ids On Rna-Editing Sites
updated 5.9 years ago by 45k • written 12.9 years ago by 36k
6
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1
reply
5.5k
views
Answer: A: Doc/tutorial UCSC MySQL
updated 5.9 years ago by 45k • written 9.9 years ago by 36k
0
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0
replies
8.2k
views
Comment: C: Pindel And Mac Os X
updated 5.9 years ago by 45k • written 12.9 years ago by 36k
2
votes
1
reply
3.4k
views
Answer: A: Finding only intergenic regions in a BED file
updated 6.0 years ago by 45k • written 9.9 years ago by 36k
0
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0
replies
2.5k
views
Answer: A: How to extract specific reads from mapped BED
updated 6.0 years ago by 45k • written 9.9 years ago by 36k
0
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0
replies
2.5k
views
Comment: C: How to extract specific reads from mapped BED
updated 6.0 years ago by 45k • written 9.9 years ago by 36k
11
votes
0
replies
9.9k
views
Answer: A: Bed file: merging intervals that overlap a certain percentage
updated 6.0 years ago by 45k • written 9.9 years ago by 36k
1
vote
1
reply
9.9k
views
Answer: A: Bed file: merging intervals that overlap a certain percentage
updated 6.0 years ago by 45k • written 9.9 years ago by 36k
3
votes
1
reply
6.9k
views
Answer: A: Annotaion Based On The Genomic Range
updated 6.0 years ago by 45k • written 13.0 years ago by 36k
4
votes
0
replies
3.9k
views
Answer: A: Software For Analyzing Gene Annotation On Genomes
updated 6.0 years ago by 45k • written 13.1 years ago by 36k
3
votes
0
replies
3.7k
views
Answer: A: C++ parse GTF file
updated 6.0 years ago by 45k • written 9.9 years ago by 36k
0
votes
2
replies
5.3k
views
Answer: A: Implement Bgzip Into C Program
updated 6.0 years ago by 45k • written 13.1 years ago by 36k
2
votes
1
reply
5.0k
views
Answer: A: merge sites of BEDgraph file and calculate coverage weighted average of collapse
updated 6.0 years ago by 45k • written 10.0 years ago by 36k
0
votes
1
reply
4.5k
views
Comment: C: Has anyone tried the new LFQC compression scheme for FASTQ?
updated 6.0 years ago by 45k • written 10.0 years ago by 36k
1
vote
1
reply
5.0k
views
Comment: C: merge sites of BEDgraph file and calculate coverage weighted average of collapse
updated 6.0 years ago by 45k • written 10.0 years ago by 36k
1
vote
1
reply
5.0k
views
Answer: A: merge sites of BEDgraph file and calculate coverage weighted average of collapse
updated 6.0 years ago by 45k • written 10.0 years ago by 36k
0
votes
1
reply
3.0k
views
Comment: C: Extract N amino acids from fasta file
6.0 years ago by Alex Reynolds 36k
2
votes
1
reply
1.7k
views
Answer: A: Whole-genome percentile values in bigWig files
6.0 years ago by Alex Reynolds 36k
0
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0
replies
2.8k
views
Comment: C: Get percentile cutoff from bigwig files
6.0 years ago by Alex Reynolds 36k
0
votes
0
replies
33k
views
Comment: C: C program to find complementary of DNA sequence
updated 6.0 years ago by 45k • written 10.0 years ago by 36k
0
votes
0
replies
7.0k
views
Comment: C: failing to convert gtf to bed by bedops
updated 6.0 years ago by 45k • written 10.0 years ago by 36k
0
votes
3
replies
7.0k
views
Comment: C: failing to convert gtf to bed by bedops
updated 6.0 years ago by 45k • written 10.0 years ago by 36k
2,902 results • Page 13 of 59
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