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Comment: C: Converting a VCF with SNPs and indels to BED format
8.2 years ago by Alex Reynolds 36k
1
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1
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48k
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Comment: C: Converting a VCF with SNPs and indels to BED format
8.2 years ago by Alex Reynolds 36k
0
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1
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48k
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Comment: C: Converting a VCF with SNPs and indels to BED format
8.2 years ago by Alex Reynolds 36k
1
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4.3k
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Answer: A: gc content file for human genome large and difficult to parse into separate chro
8.2 years ago by Alex Reynolds 36k
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2.8k
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Tutorial: Installing multiprocessor-capable MEME to work with a Slurm job scheduler environment
slurm meme parallel
updated 2.5 years ago by 45k • written 8.2 years ago by 36k
4
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5.5k
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Answer: A: How to obtain rs ID having genomic position
8.2 years ago by Alex Reynolds 36k
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2.0k
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Answer: A: Gene annotation from genomic features
8.2 years ago by Alex Reynolds 36k
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2.4k
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Answer: A: Finding Transcriptional Factor Binding Motifs by Table Browser in UCSC
8.2 years ago by Alex Reynolds 36k
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1
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2.4k
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Comment: C: Genes around open regions
8.2 years ago by Alex Reynolds 36k
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5.3k
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Comment: C: bedtools merge - removing features completly overlapped by other features
8.2 years ago by Alex Reynolds 36k
1
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2
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5.3k
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Answer: A: bedtools merge - removing features completly overlapped by other features
8.2 years ago by Alex Reynolds 36k
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1.9k
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Comment: C: Eliminating repetetive motifs found by MEME
8.2 years ago by Alex Reynolds 36k
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1
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5.3k
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Comment: C: bedtools merge - removing features completly overlapped by other features
8.2 years ago by Alex Reynolds 36k
0
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1
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5.3k
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Comment: C: bedtools merge - removing features completly overlapped by other features
8.2 years ago by Alex Reynolds 36k
3
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0
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3.4k
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Answer: A: fixedStep or variableStep Smoothening wig file
8.2 years ago by Alex Reynolds 36k
2
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1
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1.9k
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Answer: A: Eliminating repetetive motifs found by MEME
8.2 years ago by Alex Reynolds 36k
3
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1
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2.4k
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Answer: A: Genes around open regions
8.2 years ago by Alex Reynolds 36k
2
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0
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9.0k
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Answer: A: Pulling out gene names from a FASTA file with a list of IDs
8.2 years ago by Alex Reynolds 36k
1
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1
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4.1k
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Answer: A: How to split columns into rows based on gene ids in R?
8.2 years ago by Alex Reynolds 36k
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0
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19k
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Comment: C: Convert sequence file to fasta format using python
8.2 years ago by Alex Reynolds 36k
3
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1
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4.7k
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Answer: A: AWK: if value falls within a range, print sum of values
8.2 years ago by Alex Reynolds 36k
4
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0
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15k
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Answer: A: Removing rows with duplicate values based on 1 or more key values - linux awk
8.2 years ago by Alex Reynolds 36k
17
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10
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28k
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6 follow
Converting TCGA expression data from FPKM to TPM
TCGA TPM FPKM expression RNA-seq
updated 3.2 years ago by 45k • written 10.1 years ago by 36k
1
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8.6k
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Comment: C: military application of bioinformatics
8.2 years ago by Alex Reynolds 36k
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1
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1.6k
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Answer: A: Is there a sequence alignment tool that will give an output of all "good" alignm
8.2 years ago by Alex Reynolds 36k
2
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6.5k
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Answer: A: Genome Browser suggestions
8.2 years ago by Alex Reynolds 36k
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3.8k
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Comment: C: About bedtools closest command line output understanding
8.2 years ago by Alex Reynolds 36k
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2.9k
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Comment: C: code for text file parsing
8.2 years ago by Alex Reynolds 36k
2
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1
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2.9k
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Answer: A: code for text file parsing
8.2 years ago by Alex Reynolds 36k
0
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0
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2.2k
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Answer: A: simple statistics question
8.2 years ago by Alex Reynolds 36k
4
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1
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105k
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Answer: A: Selecting Random Pairs From Fastq?
8.2 years ago by Alex Reynolds 36k
0
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0
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15k
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Comment: C: Extracting randomly subset of fastq reads from a huge file
8.2 years ago by Alex Reynolds 36k
0
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2.9k
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Comment: C: code for text file parsing
8.3 years ago by Alex Reynolds 36k
0
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0
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15k
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Comment: C: Extracting randomly subset of fastq reads from a huge file
8.3 years ago by Alex Reynolds 36k
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0
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3.6k
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Comment: C: R: How to loop to extract all sequences within specific positions?
8.3 years ago by Alex Reynolds 36k
1
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2.7k
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Comment: C: Bedtools merge only part of feature that overlaps, not whole feature
8.3 years ago by Alex Reynolds 36k
1
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1
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3.9k
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Answer: A: Average intron length in Drosophila melagnoster
8.3 years ago by Alex Reynolds 36k
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2.0k
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Comment: C: Find "mean" cluster positions after random sampling of genomic events
8.3 years ago by Alex Reynolds 36k
3
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1
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2.7k
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Answer: A: Bedtools merge only part of feature that overlaps, not whole feature
8.3 years ago by Alex Reynolds 36k
3
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0
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9.2k
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Answer: A: Finding Kmers From Fasta File
8.3 years ago by Alex Reynolds 36k
1
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0
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4.2k
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Answer: A: How to merge bedGraph records which are next to each other and have the same sco
8.3 years ago by Alex Reynolds 36k
0
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0
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3.0k
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Comment: C: manipulating BED occupancy files' intervals
8.3 years ago by Alex Reynolds 36k
0
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0
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3.6k
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Answer: A: blast+ and GnuTLS errors on Mac
8.3 years ago by Alex Reynolds 36k
3
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0
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2.4k
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Answer: A: extract the number of reads around TSS
8.3 years ago by Alex Reynolds 36k
0
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0
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5.2k
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Comment: C: How to extract all the simple repeats from the hg19 reference genome
8.3 years ago by Alex Reynolds 36k
2
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1
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5.2k
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Answer: A: How to extract all the simple repeats from the hg19 reference genome
8.3 years ago by Alex Reynolds 36k
1
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0
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2.5k
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Answer: A: Obtaining .bed list of exons of chr17
8.3 years ago by Alex Reynolds 36k
1
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1
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2.0k
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Comment: C: Find "mean" cluster positions after random sampling of genomic events
8.3 years ago by Alex Reynolds 36k
2
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0
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3.8k
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Answer: A: Cases where indexing is efficient for read retrieval
8.3 years ago by Alex Reynolds 36k
1
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1
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19k
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Comment: C: convert human gene names to ensembl ID
8.3 years ago by Alex Reynolds 36k
2,902 results • Page 31 of 59
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