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1
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3.1k
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Answer: Answer: Map ENCODE DNaseI footprints to putative TFs
4.0 years ago by Alex Reynolds 36k
1
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0
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10k
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Comment: Comment: Minimum Standards For Bioinformatics Command Line Tools
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
0
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0
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7.2k
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Comment: C: [Beginner] Introduction to bioinformatics file types
10.4 years ago by Alex Reynolds 36k
1
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1
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3.6k
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Comment: C: tracking a hub's targeted genes expression in different organs
10.4 years ago by Alex Reynolds 36k
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0
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2.5k
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Comment: Comment: List or database of regulatory SNPs
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
1
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1
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3.6k
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Answer: Answer: tracking hub's targeted genes expression pattern in different conditions
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
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0
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4.2k
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Comment: Comment: Optimizing samtools shell scripts. How to make code run faster
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
0
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1
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4.2k
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Comment: C: Optimizing samtools shell scripts. How to make code run faster
10.4 years ago by Alex Reynolds 36k
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0
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5.7k
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Comment: C: desktop bioinformatics platform specs
10.4 years ago by Alex Reynolds 36k
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0
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6.5k
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Comment: C: Count reads within region
10.4 years ago by Alex Reynolds 36k
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0
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3.6k
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Comment: Comment: overlap gene and exon with bed file
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
0
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0
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5.4k
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Comment: C: Cant find database of Transcription factors' binding site
10.4 years ago by Alex Reynolds 36k
0
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1
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3.6k
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Comment: Comment: overlap gene and exon with bed file
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
1
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1
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2.3k
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Answer: Answer: bedops command to map bed to genes
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
0
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0
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3.0k
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Answer: A: Shrink elements of a bedtools file
10.4 years ago by Alex Reynolds 36k
0
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1
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5.4k
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Comment: C: Cant find database of Transcription factors' binding site
10.4 years ago by Alex Reynolds 36k
0
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1
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3.6k
views
Comment: Comment: overlap gene and exon with bed file
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
3
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1
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3.4k
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Answer: Answer: How to visualize a network like in the provided example?
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
3
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0
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2.6k
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Answer: Answer: How to extract certain gene of interest from Genbank file
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
0
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1
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4.6k
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Comment: C: Biostar under spam attack - restrictions added to post content and title
10.4 years ago by Alex Reynolds 36k
0
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1
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3.3k
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Comment: C: Searching promoter consensus in a gene
10.4 years ago by Alex Reynolds 36k
4
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2
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3.3k
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Answer: Answer: Searching promoter consensus in a gene
updated 3.0 years ago by 45k • written 10.4 years ago by 36k
3
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1
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7.5k
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Comment: Comment: What is this annotation file format?
updated 2.9 years ago by 45k • written 10.4 years ago by 36k
0
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0
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3.4k
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Comment: Comment: reviewing a paper with software/code I cannot run
updated 2.9 years ago by 45k • written 10.4 years ago by 36k
1
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0
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15k
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Comment: C: Tool for random access to indexed BAM files in S3?
10.4 years ago by Alex Reynolds 36k
0
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0
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5.3k
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Comment: Comment: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
updated 2.9 years ago by 45k • written 10.4 years ago by 36k
0
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1
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2.5k
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Comment: C: Problems reading from bed files in Table Browser.
10.4 years ago by Alex Reynolds 36k
0
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0
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2.9k
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Comment: C: Find Substring of Trie Keys
10.4 years ago by Alex Reynolds 36k
0
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0
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8.9k
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Comment: C: Getting transcript annotation in BED format along with reference seq.
10.4 years ago by Alex Reynolds 36k
4
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1
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8.9k
views
Answer: Answer: Getting transcript annotation in BED format along with reference seq.
updated 2.9 years ago by 45k • written 10.4 years ago by 36k
1
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2
replies
13k
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Comment: Comment: Linux for loop for 2 inputs and 4 outputs for Trimmomatic fastq quality trimming
updated 2.9 years ago by 45k • written 10.4 years ago by 36k
1
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1
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3.5k
views
Answer: Answer: BedTools options - Overlap exons for various bed files
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
0
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0
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2.3k
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Answer: A: removing/ masking satellite sequences in data
10.5 years ago by Alex Reynolds 36k
0
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0
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3.3k
views
Answer: Answer: Generate A Subset Of Bam Or Reads Based On Vcf
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
0
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0
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5.2k
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Answer: Answer: Quickly subsetting VCF while being memory efficient
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
1
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2
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2.5k
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Answer: A: find transcription factor
10.5 years ago by Alex Reynolds 36k
0
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0
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2.3k
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Comment: C: Assign number to bed file intervals
10.5 years ago by Alex Reynolds 36k
0
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1
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2.3k
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Answer: Answer: Assign number to bed file intervals
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
8
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2
replies
38k
views
Answer: Answer: Help a graduate student going into Bioinformatics looking for a new personal lap
updated 2.8 years ago by 45k • written 10.6 years ago by 36k
2
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1
reply
38k
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Comment: C: Help a graduate student going into Bioinformatics looking for a new personal lap
10.5 years ago by Alex Reynolds 36k
0
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0
replies
13k
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Comment: Comment: Bedtools: merge all features with the same id
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
1
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1
reply
13k
views
Answer: Answer: Bedtools: merge all features with the same id
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
3
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2
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3.5k
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Answer: Answer: Extract flanking genes around sRNA from gff files
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
0
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0
replies
2.5k
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Comment: C: Getting Bedtools Error
10.5 years ago by Alex Reynolds 36k
3
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1
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2.5k
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Answer: Answer: Getting Bedtools Error
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
1
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0
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2.8k
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Answer: A: Annotation file formats
10.5 years ago by Alex Reynolds 36k
0
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0
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4.3k
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Comment: C: Principal component analysis in R on expression data
10.5 years ago by Alex Reynolds 36k
0
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0
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3.5k
views
Comment: Comment: Extract flanking genes around sRNA from gff files
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
0
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1
reply
5.3k
views
Answer: Answer: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
0
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1
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3.4k
views
Answer: Answer: Identifying repeated genes from multiple lists
updated 2.9 years ago by 45k • written 10.5 years ago by 36k
2,902 results • Page 45 of 59
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