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Answer: Answer: convert Ensemble to HGNC symbols in a file with several columns
4.4 years ago by Alex Reynolds 36k
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Comment: Comment: Divide the genome to vary lengths windows in R
4.4 years ago by Alex Reynolds 36k
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Answer: Answer: How to search for genes 100Kb up and downstream of any genomic site
4.4 years ago by Alex Reynolds 36k
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3.6k
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Answer: Answer: How to find overlapping coordinates of a gtf file
4.4 years ago by Alex Reynolds 36k
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978
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Comment: Comment: Interpret PCA as combinations of SNPs
4.4 years ago by Alex Reynolds 36k
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Answer: Answer: getting a set of coverage/depth metrics for multiple regions
4.4 years ago by Alex Reynolds 36k
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Comment: Comment: k-mer finding and counting
4.4 years ago by Alex Reynolds 36k
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Answer: Answer: Getting peak (bed narrowPeak) from signals (Wig)
4.4 years ago by Alex Reynolds 36k
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874
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Answer: Answer: Gradient Descent for gene degradation
4.4 years ago by Alex Reynolds 36k
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1.2k
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Answer: Answer: Best hit from BLAST for a particular genomic region
4.4 years ago by Alex Reynolds 36k
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2.2k
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Answer: Answer: How to print the header of bed file and the lines that belong to chromosome 2
4.5 years ago by Alex Reynolds 36k
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1.8k
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Answer: Answer: Bedops split bed coordinates with zero based half opened format
4.5 years ago by Alex Reynolds 36k
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2.9k
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Comment: Comment: Bash operations
4.5 years ago by Alex Reynolds 36k
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2.9k
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Answer: Answer: Bash operations
4.5 years ago by Alex Reynolds 36k
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4.6k
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Comment: Comment: specific k-mer count in multi fasta file
4.5 years ago by Alex Reynolds 36k
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1.6k
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Answer: Answer: NNNNNN in genomic file and promoter sequence
4.5 years ago by Alex Reynolds 36k
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1.7k
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Comment: Comment: how to plot one-dimeson heatmap using R
4.5 years ago by Alex Reynolds 36k
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2.9k
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Answer: Answer: How to plot "Distribution of SNPs per Mbp"
4.5 years ago by Alex Reynolds 36k
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6.3k
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Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
4.5 years ago by Alex Reynolds 36k
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6.3k
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Answer: Answer: BED file: Find intervals that overlap a certain percentage and keep the longest
4.5 years ago by Alex Reynolds 36k
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2
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6.3k
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Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
4.5 years ago by Alex Reynolds 36k
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1
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4.0k
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Comment: Comment: How do I properly visualize ATAC seq data on UCSC browser
4.5 years ago by Alex Reynolds 36k
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4.0k
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Answer: Answer: How do I properly visualize ATAC seq data on UCSC browser
4.5 years ago by Alex Reynolds 36k
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1
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6.3k
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Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
4.5 years ago by Alex Reynolds 36k
1
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1
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6.3k
views
Comment: Comment: BED file: Find intervals that overlap a certain percentage and keep the longest
4.5 years ago by Alex Reynolds 36k
1
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1
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6.3k
views
Answer: Answer: BED file: Find intervals that overlap a certain percentage and keep the longest
4.5 years ago by Alex Reynolds 36k
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2
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1.2k
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Comment: Comment: Trimming gene coding sequence for finding TFBS
4.5 years ago by Alex Reynolds 36k
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2.3k
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Comment: Comment: How to compare data in two files and print matching data of file1 and file2
4.5 years ago by Alex Reynolds 36k
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2
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2.3k
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Answer: Answer: How to compare data in two files and print matching data of file1 and file2
4.5 years ago by Alex Reynolds 36k
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1.6k
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Comment: Comment: blat standalone version won't run in python cgi
4.5 years ago by Alex Reynolds 36k
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1
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1.6k
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Comment: Comment: blat standalone version won't run in python cgi
4.5 years ago by Alex Reynolds 36k
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0
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1.2k
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Answer: Answer: How to extract regions from abed file based on variants in vcf file
4.5 years ago by Alex Reynolds 36k
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1
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2.2k
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Comment: Comment: Comparing genomes against randomized genomes
4.6 years ago by Alex Reynolds 36k
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1.3k
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Answer: Answer: Remove all rows that begin with characters and keep only those that begin with n
4.6 years ago by Alex Reynolds 36k
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7.3k
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Comment: Comment: Add count numbers to headers in a fasta file
4.6 years ago by Alex Reynolds 36k
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1.6k
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Answer: Answer: SNP count in a set of genomic regions
4.6 years ago by Alex Reynolds 36k
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5.5k
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Comment: Comment: How to find tandem duplications pattern in a DNA sequence
4.6 years ago by Alex Reynolds 36k
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0
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6.7k
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Answer: Answer: How to count elements with a specific condition in csv file using python
4.6 years ago by Alex Reynolds 36k
2
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2
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2.7k
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Answer: Answer: Mapping RNA seq reads from bed file to genes
4.6 years ago by Alex Reynolds 36k
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1
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3.5k
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Comment: Comment: How to choose one TSS for a gene
4.6 years ago by Alex Reynolds 36k
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3.5k
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Comment: Comment: How to choose one TSS for a gene
4.6 years ago by Alex Reynolds 36k
3
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1
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5.5k
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Answer: Answer: How to find tandem duplications pattern in a DNA sequence
4.6 years ago by Alex Reynolds 36k
1
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1
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4.6k
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Answer: Answer: how to run linux code in python
4.6 years ago by Alex Reynolds 36k
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0
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3.3k
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Comment: Comment: bedops wig2bed 'Row begins with a tab or space' error
4.6 years ago by Alex Reynolds 36k
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3.0k
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Comment: Comment: SNP coordinates to rsID in .bim file
4.6 years ago by Alex Reynolds 36k
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1
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1.5k
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Answer: Answer: Get the percentage of fragment length that is less than 120bp
4.6 years ago by Alex Reynolds 36k
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1
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3.5k
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Comment: Comment: File conversion from coordinates to genes
4.6 years ago by Alex Reynolds 36k
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7.4k
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Comment: Comment: How To Generate Dna K-Mers Of A Given Length In C?
4.6 years ago by Alex Reynolds 36k
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1.4k
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Answer: Answer: bedtool closest
updated 4.6 years ago by 45k • written 4.6 years ago by 36k
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2.1k
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Answer: Answer: Visualize DNA sequence as a dot plot?
4.6 years ago by Alex Reynolds 36k
2,902 results • Page 6 of 59
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