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2.3k
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Answer: A: motif for TF within CTCF boundary
updated 4.3 years ago by 43k • written 9.9 years ago by 35k
2
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1
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5.0k
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Answer: A: JASPAR, TFs and their target genes
updated 4.3 years ago by 43k • written 9.9 years ago by 35k
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2.9k
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Answer: A: How to get karyotype information for a certain section of genome.
updated 4.3 years ago by 43k • written 9.9 years ago by 35k
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13k
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Answer: A: Samtools or Bedtools: How to filter a bam file with a bed file using strand info
updated 4.3 years ago by 43k • written 9.9 years ago by 35k
2
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2
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2.4k
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Answer: C: Mapping bed file to the ends of bed features of another file
updated 4.3 years ago by 43k • written 9.9 years ago by 35k
2
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0
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4.4k
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Answer: A: Advantages of Biobase's TRANSFAC over and above what is freely available?
updated 4.3 years ago by 43k • written 9.9 years ago by 35k
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1
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2.0k
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Answer: Answer: Sequence filtration based on length
updated 14 months ago by 43k • written 9.9 years ago by 35k
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2.2k
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Answer: A: For a given set of coordinates is there a simple fast way of determining the 'su
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
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1
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16k
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Answer: A: How To Randomly Sample A Subset Of Lines From A Bed File
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
3
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2
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13k
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Answer: A: What is the best programming language for NGS data analysis pipeline development
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
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2.1k
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Answer: A: Anyone used FIMO from MEME before?
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
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1
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2.7k
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Answer: A: Download large tracks on the UCSC browser
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
1
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1
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15k
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Answer: A: Exploring cancer mutation data portals
updated 4.4 years ago by 43k • written 8.3 years ago by 35k
2
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0
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7.8k
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Answer: A: Download all files from a web directory which requires login ID and password by
4.4 years ago by Alex Reynolds 35k
3
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2
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9.2k
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Answer: A: Most effective way to merge individual VCF files into VCF files merged by chromo
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
2
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0
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2.3k
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Answer: A: How to use ENCODE data to find histone marks overlapping with 450k data
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
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0
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2.6k
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Answer: A: Create Image From Mapping Region
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
2
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0
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5.6k
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Answer: A: EMBOSS Needle: Read sequences from stdin
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
4
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0
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4.0k
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Answer: A: Is there a ready list of all SNPs in UCSC?
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
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0
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4.5k
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Answer: A: How to make this kind of 3-D plotting for cancer subclones ? (picture attached)
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
4
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0
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6.1k
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Answer: Answer: Bedgraph to bed file conversion
updated 2.6 years ago by 43k • written 10.0 years ago by 35k
3
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1
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2.6k
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Answer: A: Do these warning messages during my bedops install mean bedops won't work proper
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
3
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2
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7.1k
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Answer: A: How to query for a specific motif upstream of each of the gene in a list?
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
0
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1
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3.4k
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Answer: A: cell sizes in R plots
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
1
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0
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3.0k
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Answer: A: binding close to gene
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
2
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0
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7.2k
views
Answer: A: Reading gene expression data from an Excel spreadsheet into a python dictionary
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
0
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1
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5.7k
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Answer: A: ngs.plot: Quick mining and visualization of next-generation sequencing data by i
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
2
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0
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2.7k
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Answer: A: Identify overlapping coordinates
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
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0
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5.8k
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Answer: A: Drug information databases
updated 4.4 years ago by 43k • written 10.0 years ago by 35k
3
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1
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15k
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Answer: A: Extracting regions from .bam file using a .gff or .gtf file
updated 4.4 years ago by 43k • written 10.1 years ago by 35k
5
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0
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2.5k
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Answer: A: Locating SNP's to genes
updated 4.4 years ago by 43k • written 10.1 years ago by 35k
2
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0
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7.3k
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Answer: A: error with bedtools slop
updated 4.4 years ago by 43k • written 10.1 years ago by 35k
3
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0
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5.8k
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Answer: A: How To Find Upstream/Downstream Bound Features With A Chip-Seq Analysis In Galax
updated 4.4 years ago by 43k • written 10.1 years ago by 35k
1
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0
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3.8k
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Answer: A: Common genomic intervals in R
updated 4.4 years ago by 43k • written 10.1 years ago by 35k
1
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0
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7.9k
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Answer: A: Extracting Random Sequences From A Large Fasta File Using Bioperl
updated 4.4 years ago by 43k • written 10.1 years ago by 35k
0
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1
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1.9k
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Answer: A: Good way of plotting a statistic with error bars
updated 4.4 years ago by 43k • written 8.3 years ago by 35k
2
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0
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3.0k
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Answer: A: Bedops V2.4 Released
updated 4.4 years ago by 43k • written 10.2 years ago by 35k
6
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1
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7.7k
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Answer: A: Intersect multiple BED files
updated 4.4 years ago by 43k • written 8.3 years ago by 35k
0
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0
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3.4k
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Answer: A: Parsing GENCODE GTF to simpler BED files: am I reinventing the wheel ?
updated 4.4 years ago by 43k • written 8.3 years ago by 35k
3
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1
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43k
views
Answer: A: How To Get Bed File Containing Exons Of Canonical Transcripts And Their Correspo
updated 4.4 years ago by 43k • written 10.3 years ago by 35k
2
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0
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21k
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Answer: A: How To Write Bash Script To Download Files From Specific Databse
updated 4.4 years ago by 43k • written 10.3 years ago by 35k
1
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0
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2.4k
views
Answer: A: Access Hash With 250M Entries
updated 4.4 years ago by 43k • written 10.3 years ago by 35k
1
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1
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2.4k
views
Answer: A: Number Of Species Is Restricted By Genome Combinatorics?
updated 4.4 years ago by 43k • written 10.4 years ago by 35k
2
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0
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2.7k
views
Answer: A: Do wiggle files have to be sorted?
updated 4.4 years ago by 43k • written 8.3 years ago by 35k
2
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0
replies
2.7k
views
Answer: A: How To Study The Characteristics Of Neighboring Genes (Of A Query) Of A Bacteria
updated 4.4 years ago by 43k • written 10.5 years ago by 35k
3
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1
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4.9k
views
Answer: A: Filtering Tss List To Remove Tss Within X #Bp From One Another
updated 4.4 years ago by 43k • written 10.5 years ago by 35k
3
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1
reply
9.1k
views
Answer: A: Quickly Plotting Distribution Of Points From Bed File?
updated 4.4 years ago by 43k • written 10.6 years ago by 35k
3
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2
replies
5.4k
views
Answer: A: Programming Challenge: Divide The Human Genome Among X Cores, Taking Into Accoun
updated 4.4 years ago by 43k • written 10.8 years ago by 35k
1
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1
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5.9k
views
Answer: A: Produce Bed File With Gaps In Coverage From A Bam File
updated 4.4 years ago by 43k • written 10.8 years ago by 35k
2
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2
replies
2.8k
views
Answer: Answer: How to analyze methylation around splice junctions
updated 21 months ago by 43k • written 8.5 years ago by 35k
1,473 results • Page 6 of 30
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