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Comment: Comment: GSEA with mouse RNAseq data
4.5 years ago by Alternative ▴ 290
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1
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2.0k
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Comment: C: Does MNase increase Multi mapper fraction?
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 290
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7.0k
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Answer: A: Log2 fold change heatmap
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 290
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1
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4.2k
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Comment: C: Homer mergePeaks : Cannot calculate the mean of overlapped peaks
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 290
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1
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4.2k
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Answer: A: Homer mergePeaks : Cannot calculate the mean of overlapped peaks
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 290
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9.4k
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Comment: C: Doubts related to MACS tool
updated 5.8 years ago by 45k • written 9.5 years ago by ▴ 290
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2
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9.4k
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Answer: A: Doubts related to MACS tool
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 290
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0
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2.4k
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Answer: A: Randomly filtering reads from two sam files
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 290
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1
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12k
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Answer: A: How to make sure there is no duplicate sequence in a fasta file?
updated 5.8 years ago by 45k • written 10.0 years ago by ▴ 290
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12k
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Comment: C: How to make sure there is no duplicate sequence in a fasta file?
5.8 years ago by Alternative ▴ 290
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1
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3.3k
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Answer: A: Data format to produces a heatmap like this
updated 5.8 years ago by 45k • written 9.9 years ago by ▴ 290
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2
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4.5k
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Answer: A: Pairwise Analysis - I want to look at overlay between Pol II peaks and H3K4me1/
updated 5.8 years ago by 45k • written 9.9 years ago by ▴ 290
22
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9
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5.9k
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6 follow
Detecting highly variable genes within replicates
Gene expression variability
updated 6.6 years ago by ★ 2.2k • written 6.6 years ago by ▴ 290
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9.9k
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Answer: A: ATAC-seq: differential peaks using macs2 bdgdiff yields strange results
7.2 years ago by Alternative ▴ 290
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2.3k
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Comment: C: Remove batch effect from exome data
8.0 years ago by Alternative ▴ 290
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2
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2.3k
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Remove batch effect from exome data
NGS exome-sequencing batch-effect
updated 17 months ago by 45k • written 8.0 years ago by ▴ 290
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6.7k
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Comment: A: Powerful desktop computer for genomics
9.3 years ago by Alternative ▴ 290
16
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10
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6.7k
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6 follow
Powerful desktop computer for genomics
next-gen sequencing ChIP-Seq RNA-Seq
9.3 years ago by Alternative ▴ 290
1
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0
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5.4k
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Answer: A: How can find a list of proteins are neighbour?
9.8 years ago by Alternative ▴ 290
2
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0
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33k
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Answer: A: C program to find complementary of DNA sequence
9.8 years ago by Alternative ▴ 290
1
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1
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5.8k
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Answer: A: IGV view of bam file
9.8 years ago by Alternative ▴ 290
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5.3k
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Comment: A: Hot research areas in Bioinformatics for career development
9.9 years ago by Alternative ▴ 290
2
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3.9k
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Comment: C: Biopython or Bioperl help
9.9 years ago by Alternative ▴ 290
1
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1
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6.3k
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Answer: Answer: How to know if samtools sort exited normally [left temporary files behind]
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 290
1
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0
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2.4k
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Answer: A: Distance Between Peaks in Macs Peak-calling data
10.0 years ago by Alternative ▴ 290
1
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0
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4.4k
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Answer: Answer: how to get p value for a set of fdr value
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 290
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2.2k
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Answer: A: raw transcripts to gene name
10.0 years ago by Alternative ▴ 290
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0
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6.1k
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Answer: Answer: DAVID Functional Annotation Clustering Analysis
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 290
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0
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3.7k
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Answer: A: bed files for deeptools
10.0 years ago by Alternative ▴ 290
2
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1
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4.6k
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Answer: Answer: How to interpret the difference among these three options in strandedness from H
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 290
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0
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3.3k
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Answer: A: Finding max number of high scoring, non-overlapping BED records
10.0 years ago by Alternative ▴ 290
1
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0
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4.6k
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Comment: Comment: How to interpret the difference among these three options in strandedness from H
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 290
0
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1
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14k
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Comment: C: I have same samples in multiple lanes. What are all the steps to be taken before
10.0 years ago by Alternative ▴ 290
2
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0
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2.6k
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Answer: Answer: find orthologous from a bed file
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 290
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0
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3.2k
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Comment: C: Why is the scaling factor always million while dealing with RNA-Seq expression?
10.0 years ago by Alternative ▴ 290
0
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0
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3.9k
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Answer: A: How to do sequencing reads technical analysis and biological quality analysis fo
10.0 years ago by Alternative ▴ 290
1
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1
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5.3k
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Answer: Answer: Extract coordinates of adjacent genes for each provided intergenic regions from
updated 3.0 years ago by 45k • written 10.0 years ago by ▴ 290
1
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0
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3.6k
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Answer: A: H3K4me3 occupancy visualisation
10.0 years ago by Alternative ▴ 290
1
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0
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2.5k
views
Answer: Answer: merging sequences from bedtools options -name, -tab into one file
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 290
1
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0
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2.5k
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Answer: Answer: Fast tool for de novo motif search
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 290
2
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1
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3.1k
views
Answer: Answer: Generate heatmap or table showing genes found in multiple tests
updated 3.0 years ago by 45k • written 10.1 years ago by ▴ 290
41 results • Page 1 of 1
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