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4
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1
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7.4k
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Answer: A: How to get the list of common genes from a VennDiagram?
3.2 years ago by manuel.belmadani ★ 1.3k
1
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0
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2.7k
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Answer: A: Annovar using VCF file
updated 3.2 years ago by 38k • written 7.1 years ago by ★ 1.3k
0
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0
replies
856
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Answer: A: How to write HGVS nomination for noncoding intergenic variants
3.2 years ago by manuel.belmadani ★ 1.3k
0
votes
1
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1.3k
views
Answer: A: Clipping reads within BAM files?
3.4 years ago by manuel.belmadani ★ 1.3k
3
votes
0
replies
5.4k
views
Answer: A: Pheatmap row annotation multiple categories
3.4 years ago by manuel.belmadani ★ 1.3k
0
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0
replies
741
views
Answer: A: unsuccessful RnBeads installation
3.6 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
996
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Answer: A: SAM file generation problem
3.6 years ago by manuel.belmadani ★ 1.3k
0
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0
replies
624
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Answer: A: Genomic screen: Benjamini-Hochberg procedure
3.6 years ago by manuel.belmadani ★ 1.3k
2
votes
1
reply
800
views
Answer: A: Find motif in reads and delete everything before / extract everything after
3.6 years ago by manuel.belmadani ★ 1.3k
1
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0
replies
610
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Answer: A: What is best tool for Cohort data of DNA?
3.6 years ago by manuel.belmadani ★ 1.3k
0
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1
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1.1k
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Answer: A: Need suggestions in subsetting the Annovar annotated VCF file
3.6 years ago by manuel.belmadani ★ 1.3k
0
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0
replies
804
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Answer: A: Motif Analysis searching for NFKB/CEBPB
3.7 years ago by manuel.belmadani ★ 1.3k
0
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0
replies
1.1k
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Answer: A: How to efficiently get reference bases (hg19) for a list of SNV loci (e.g., from
3.7 years ago by manuel.belmadani ★ 1.3k
6
votes
0
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736
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Answer: A: VCF File type
3.7 years ago by manuel.belmadani ★ 1.3k
3
votes
1
reply
6.1k
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Answer: A: RNA-Seq: Getting Started with Kallisto
3.7 years ago by manuel.belmadani ★ 1.3k
0
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1
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3.0k
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Answer: A: InterVar and Varsome discrepancies in ACMG classification
3.7 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
1.1k
views
Answer: C: Novel peptide identification
3.7 years ago by manuel.belmadani ★ 1.3k
1
vote
2
replies
828
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Answer: A: All result in one file
updated 3.8 years ago by 11k • written 3.8 years ago by ★ 1.3k
2
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0
replies
3.3k
views
Answer: A: How to obtain transcript level TPM using stringtie?
3.8 years ago by manuel.belmadani ★ 1.3k
3
votes
2
replies
11k
views
Answer: A: Question: How to run several one-way ANOVAs in R using on different categories?
3.8 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
2.6k
views
Answer: A: y-axis on Volcano plot
3.8 years ago by manuel.belmadani ★ 1.3k
1
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1
reply
2.0k
views
Answer: A: intersection for several file
3.8 years ago by manuel.belmadani ★ 1.3k
1
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1
reply
2.1k
views
Answer: A: Empty BAM file upon mapping with STAR
3.9 years ago by manuel.belmadani ★ 1.3k
2
votes
0
replies
3.6k
views
Answer: A: Code golf: detecting homopolymers of length N in the (human) genome
3.9 years ago by manuel.belmadani ★ 1.3k
2
votes
1
reply
1.2k
views
Answer: A: What is the statistics test on proportion data
3.9 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
3.8k
views
Answer: A: gnomAD: query utilitites
3.9 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
2.9k
views
Answer: A: RPM data analysis with DESeq2
3.9 years ago by manuel.belmadani ★ 1.3k
1
vote
2
replies
1.8k
views
Answer: A: HGVS format to VCF from portal.gdc.cancer.gov
3.9 years ago by manuel.belmadani ★ 1.3k
3
votes
1
reply
1.7k
views
Answer: A: In R or Python, How do I implement an allele sequence "autocomplete" tool given
4.0 years ago by manuel.belmadani ★ 1.3k
0
votes
1
reply
1.6k
views
Answer: A: random sampling genome.fa
4.0 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
873
views
Answer: A: Looking for tool recommendations for text mining
4.0 years ago by manuel.belmadani ★ 1.3k
5
votes
1
reply
4.7k
views
Answer: A: How to combine multiple data files by column names?
4.0 years ago by manuel.belmadani ★ 1.3k
3
votes
1
reply
1.9k
views
Answer: A: Simple FASTQ/A manipulation... how to add a single adapter sequence to 3' of all
4.0 years ago by manuel.belmadani ★ 1.3k
2
votes
0
replies
1.3k
views
Answer: A: How to create a tab delimited file?
4.0 years ago by manuel.belmadani ★ 1.3k
1
vote
2
replies
3.1k
views
Answer: C: Why my Hisat2 result is 0% aligned concordantly and HTseq result is 100% not ali
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
2.3k
views
Answer: A: Where to Download Cancer Raw Reads (fastq)?
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
1.1k
views
Answer: A: Understanding Bowtie output
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
6.0k
views
Answer: A: Creation of a VCF file from scratch with python
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
1.7k
views
Answer: A: Cannot identify software used to make image
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
3.7k
views
Answer: A: Principal component analysis: PC2 contribute more to variance than PC1?
4.1 years ago by manuel.belmadani ★ 1.3k
1
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0
replies
1.3k
views
Answer: C: BSc Thesis "Machine learning application in diagnosis of a genetic diseases" - I
4.1 years ago by manuel.belmadani ★ 1.3k
0
votes
1
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4.9k
views
Answer: A: How to extract total allele frequency from gnomAD annotation
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
2
replies
990
views
Answer: A: how to go from aligning forward when analyzing whole exome sequencing
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
0
replies
2.0k
views
Answer: A: Remove low quality base calls from reads
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
1.1k
views
Answer: A: Seeking for a Linux based script ?
4.1 years ago by manuel.belmadani ★ 1.3k
7
votes
3
replies
9.5k
views
Answer: A: Reproducing this plot in R
4.1 years ago by manuel.belmadani ★ 1.3k
0
votes
0
replies
6.2k
views
Answer: A: PolyPhen Humdiv vs HumVar discrepancies
4.1 years ago by manuel.belmadani ★ 1.3k
0
votes
0
replies
2.0k
views
Answer: A: same transcript id with STAR quant mode
4.1 years ago by manuel.belmadani ★ 1.3k
3
votes
3
replies
8.9k
views
Answer: A: STAR or Bowtie for small RNA seq?
4.1 years ago by manuel.belmadani ★ 1.3k
1
vote
1
reply
1.7k
views
Answer: A: Noob question about reading SNP results from BAM file visually
4.2 years ago by manuel.belmadani ★ 1.3k
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