Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
answers
0
votes
0
replies
1.9k
views
Answer:
A: pipeline of analyses to identify functional loops of chromosomes
updated 4.8 years ago by
Ram
44k • written 8.8 years ago by
Fidel
★ 2.0k
0
votes
0
replies
3.0k
views
Answer:
A: Finding instances of motifs near peaks
updated 4.8 years ago by
Ram
44k • written 8.8 years ago by
Fidel
★ 2.0k
2
votes
1
reply
3.9k
views
Answer:
A: the "major" problem of gene identifiers conversion
updated 4.8 years ago by
Ram
44k • written 8.8 years ago by
Fidel
★ 2.0k
0
votes
1
reply
4.4k
views
Answer:
A: count the number of transcription factor binding sites
updated 4.8 years ago by
Ram
44k • written 8.9 years ago by
Fidel
★ 2.0k
6
votes
0
replies
2.0k
views
Answer:
A: what is the meaning of "degenerative nature" of Chip-seq
updated 4.8 years ago by
Ram
44k • written 8.9 years ago by
Fidel
★ 2.0k
1
vote
1
reply
3.5k
views
Answer:
A: Associate peak score to gene
updated 4.8 years ago by
Ram
44k • written 8.9 years ago by
Fidel
★ 2.0k
3
votes
2
replies
4.1k
views
Answer:
A: Analysis Big Data from Hi-C--> a way to find significant interaction ?
updated 4.8 years ago by
Ram
44k • written 9.2 years ago by
Fidel
★ 2.0k
1
vote
0
replies
9.6k
views
Answer:
A: How do I compute the effective genome size?
updated 4.8 years ago by
Ram
44k • written 9.0 years ago by
Fidel
★ 2.0k
0
votes
0
replies
2.1k
views
Answer:
A: ChIP-Seq alignment with random site for duplicated
updated 4.8 years ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
0
votes
0
replies
2.4k
views
Answer:
A: mapping PE or SE?
updated 4.9 years ago by
Ram
44k • written 9.2 years ago by
Fidel
★ 2.0k
1
vote
0
replies
3.9k
views
Answer:
A: Functional Classification Of Protein Complexes
updated 5.0 years ago by
Ram
44k • written 12.6 years ago by
Fidel
★ 2.0k
4
votes
0
replies
5.9k
views
Answer:
A: Single Cell RNA Seq. Analysis
updated 5.4 years ago by
Ram
44k • written 5.4 years ago by
Fidel
★ 2.0k
0
votes
1
reply
6.2k
views
Answer:
A: Cannot read loom file in scanpy
5.4 years ago by
Fidel
★ 2.0k
3
votes
1
reply
5.3k
views
Answer:
A: How quantitative is Chip-seq?
updated 6.9 years ago by
Devon Ryan
104k • written 8.3 years ago by
Fidel
★ 2.0k
2
votes
1
reply
5.1k
views
Answer:
A: How To Use Bwa To Find Restriction Enzyme Coordinates In A Genome
7.6 years ago by
Fidel
★ 2.0k
6
votes
1
reply
6.5k
views
Answer:
A: Do specialized Hi-C databases exist?
7.6 years ago by
Fidel
★ 2.0k
2
votes
0
replies
7.7k
views
Answer:
A: TUTORIALS about Hi-C data analysis
7.6 years ago by
Fidel
★ 2.0k
3
votes
0
replies
8.4k
views
Answer:
A: ChIP-Seq TSS Line Plot
7.8 years ago by
Fidel
★ 2.0k
2
votes
1
reply
2.2k
views
Answer:
A: Finding histone modification enrichment specific loci using modENCODE data
8.2 years ago by
Fidel
★ 2.0k
1
vote
0
replies
2.1k
views
Answer:
A: Error for read density visualization
8.3 years ago by
Fidel
★ 2.0k
3
votes
0
replies
2.6k
views
Answer:
A: Paired-end data with different length
8.4 years ago by
Fidel
★ 2.0k
0
votes
1
reply
5.0k
views
Answer:
Answer: Python multiprocessing FASTQ file
updated 2.1 years ago by
Ram
44k • written 8.5 years ago by
Fidel
★ 2.0k
2
votes
1
reply
3.2k
views
Answer:
Answer: Discovering motifs for core promoter elements on a set of enhancer sites
updated 2.1 years ago by
Ram
44k • written 8.6 years ago by
Fidel
★ 2.0k
2
votes
0
replies
3.1k
views
Answer:
Answer: Individual colors for heatmaps using ngsplot
updated 2.1 years ago by
Ram
44k • written 8.6 years ago by
Fidel
★ 2.0k
0
votes
0
replies
2.5k
views
Answer:
A: Comparison of two MeDip data sets
8.6 years ago by
Fidel
★ 2.0k
1
vote
0
replies
2.9k
views
Answer:
A: Generating a strand specific heatmap of ChIP-Seq Data
8.7 years ago by
Fidel
★ 2.0k
2
votes
1
reply
2.7k
views
Answer:
Answer: Re-creating a published figure
updated 2.1 years ago by
Ram
44k • written 8.8 years ago by
Fidel
★ 2.0k
2
votes
0
replies
8.2k
views
Answer:
Answer: Deeptools sample scaling
updated 2.1 years ago by
Ram
44k • written 8.8 years ago by
Fidel
★ 2.0k
1
vote
2
replies
4.9k
views
Answer:
Answer: NGS plot error
updated 2.1 years ago by
Ram
44k • written 8.9 years ago by
Fidel
★ 2.0k
2
votes
0
replies
8.8k
views
Answer:
Answer: How To Convert A Basic Bed File With Only 3 Columns (Chrname, Start, End Site) I
updated 24 months ago by
Ram
44k • written 8.9 years ago by
Fidel
★ 2.0k
2
votes
0
replies
3.0k
views
Answer:
Answer: H3K4me3 occupancy visualisation
updated 23 months ago by
Ram
44k • written 9.0 years ago by
Fidel
★ 2.0k
2
votes
1
reply
6.5k
views
Answer:
Answer: Making TSS plots for some genes for a particular histone mark
updated 23 months ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
1
vote
2
replies
2.6k
views
Answer:
Answer: analysis of deletion/insertion from mitochondria NGS data
updated 22 months ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
4
votes
1
reply
2.8k
views
Answer:
Answer: How to convert between gene ontology file formats
updated 22 months ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
0
votes
1
reply
4.4k
views
Answer:
Answer: Normalization of DNase-seq samples with globally different chromatin structures
updated 22 months ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
5
votes
0
replies
2.2k
views
Answer:
Answer: Different qualities of genomes - Is there a standard/definition?
updated 22 months ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
1
vote
1
reply
3.3k
views
Answer:
Answer: How to test statistical significance of ChIPseq enrichment in custom BED regions
updated 22 months ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
1
vote
1
reply
1.8k
views
Answer:
Answer: QC of ChIPseq data (controlling false negatives)
updated 22 months ago by
Ram
44k • written 9.1 years ago by
Fidel
★ 2.0k
1
vote
0
replies
2.8k
views
Answer:
Answer: How to check whether two genomic regions contact in 3D?
updated 2.3 years ago by
Ram
44k • written 9.5 years ago by
Fidel
★ 2.0k
1
vote
1
reply
7.9k
views
Answer:
Answer: How to compute physical per-base coverage from WGS paired-end reads?
updated 2.4 years ago by
Ram
44k • written 9.5 years ago by
Fidel
★ 2.0k
1
vote
1
reply
1.9k
views
Answer:
Answer: What are the steps to follow to extract a promoter region starting from illumina
updated 2.4 years ago by
Ram
44k • written 9.5 years ago by
Fidel
★ 2.0k
2
votes
1
reply
4.6k
views
Answer:
Answer: Application of Hi-C
updated 2.4 years ago by
Ram
44k • written 9.5 years ago by
Fidel
★ 2.0k
8
votes
1
reply
10k
views
Answer:
Answer: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
updated 2.4 years ago by
Ram
44k • written 9.6 years ago by
Fidel
★ 2.0k
1
vote
1
reply
4.2k
views
Answer:
Answer: Scan a large genome for the ocurrence of a single sequence motif?
updated 2.4 years ago by
Ram
44k • written 9.6 years ago by
Fidel
★ 2.0k
0
votes
1
reply
10.0k
views
Answer:
Answer: How do I view the height / distribution of ChIP-seq peaks?
updated 2.4 years ago by
Ram
44k • written 9.6 years ago by
Fidel
★ 2.0k
4
votes
1
reply
16k
views
Answer:
A: Best Way To Get Truly Unique Reads In Bowtie/Sam?
updated 10.4 years ago by
seidel
11k • written 11.8 years ago by
Fidel
★ 2.0k
2
votes
0
replies
3.5k
views
Answer:
A: Count The Coverage Rate Of A Bacterial Genome'S Bam File
10.4 years ago by
Fidel
★ 2.0k
7
votes
0
replies
12k
views
Answer:
A: How To Plot Read Coverage Over Many Different Genomic Regions?
10.4 years ago by
Fidel
★ 2.0k
1
vote
0
replies
11k
views
Answer:
A: Emule "Samtools View" Using Pysam
10.6 years ago by
Fidel
★ 2.0k
5
votes
1
reply
14k
views
Answer:
A: Chipseq Wig File With The Input Subtracted From Chip Sample
10.7 years ago by
Fidel
★ 2.0k
68 results • Page
1 of 2
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6