Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
2.2k
views
Comment: Comment: RNA seq aligner?
18 months ago by Dave Carlson ★ 2.2k
0
votes
0
replies
1.8k
views
Comment: Comment: Python3 or Ubuntu, not perl: Have Primers with Degenerate Bases, Need tool or wa
18 months ago by Dave Carlson ★ 2.2k
0
votes
1
reply
1.8k
views
Comment: Comment: Python3 or Ubuntu, not perl: Have Primers with Degenerate Bases, Need tool or wa
18 months ago by Dave Carlson ★ 2.2k
1
vote
2
replies
2.2k
views
Comment: Comment: RNA seq aligner?
18 months ago by Dave Carlson ★ 2.2k
0
votes
1
reply
1.0k
views
Comment: Comment: Can I perform a Functional Enrichment Analysis on a specific list of pre-defined
18 months ago by Dave Carlson ★ 2.2k
0
votes
2
replies
2.2k
views
Answer: Answer: RNA seq aligner?
18 months ago by Dave Carlson ★ 2.2k
0
votes
0
replies
987
views
Comment: Comment: What's the state of the art in bacterial whole genome alignment?
18 months ago by Dave Carlson ★ 2.2k
0
votes
2
replies
987
views
Forum: What's the state of the art in bacterial whole genome alignment?
whole genome alignment mauve
18 months ago by Dave Carlson ★ 2.2k
0
votes
1
reply
6.0k
views
Answer: Answer: How to convert raw Nanopore R9 fast5 files to fastq files ?
18 months ago by Dave Carlson ★ 2.2k
1
vote
1
reply
4.8k
views
Comment: Comment: Sbatch slurm job
18 months ago by Dave Carlson ★ 2.2k
1
vote
1
reply
1.9k
views
Comment: Comment: Moderate Mapping percentage
19 months ago by Dave Carlson ★ 2.2k
1
vote
1
reply
1.9k
views
Comment: Comment: Moderate Mapping percentage
19 months ago by Dave Carlson ★ 2.2k
0
votes
0
replies
869
views
Comment: Comment: "N/A" in fgsea result
19 months ago by Dave Carlson ★ 2.2k
1
vote
0
replies
1.1k
views
Comment: Comment: Aligning a sequence with multiple sequences in LASTZ
19 months ago by Dave Carlson ★ 2.2k
0
votes
1
reply
786
views
Comment: Comment: Big differences between biological replicates makes DESeq2 result 0
20 months ago by Dave Carlson ★ 2.2k
3
votes
0
replies
759
views
Answer: Answer: Alternatives to Mummer3 for linux?
20 months ago by Dave Carlson ★ 2.2k
1
vote
0
replies
2.9k
views
Comment: Comment: BUSCO duplicated
20 months ago by Dave Carlson ★ 2.2k
1
vote
2
replies
2.9k
views
Comment: Comment: BUSCO duplicated
20 months ago by Dave Carlson ★ 2.2k
1
vote
1
reply
2.9k
views
Comment: Comment: BUSCO duplicated
20 months ago by Dave Carlson ★ 2.2k
3
votes
1
reply
2.9k
views
Answer: Answer: BUSCO duplicated
20 months ago by Dave Carlson ★ 2.2k
2
votes
0
replies
2.6k
views
Comment: Comment: Adapting nf-core/sarek for Ion Torrent Single-End Data Analysis
20 months ago by Dave Carlson ★ 2.2k
2
votes
2
replies
2.6k
views
Answer: Answer: Adapting nf-core/sarek for Ion Torrent Single-End Data Analysis
20 months ago by Dave Carlson ★ 2.2k
0
votes
0
replies
1.5k
views
Comment: Comment: EdgeR cannot be updated. (cannot post in the bioconductor forum)
20 months ago by Dave Carlson ★ 2.2k
1
vote
1
reply
1.5k
views
Answer: Answer: EdgeR cannot be updated. (cannot post in the bioconductor forum)
20 months ago by Dave Carlson ★ 2.2k
1
vote
0
replies
2.3k
views
Answer: Answer: Plot genes along scaffolds and sort scaffolds according to their length
21 months ago by Dave Carlson ★ 2.2k
4
votes
0
replies
3.1k
views
Answer: Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
21 months ago by Dave Carlson ★ 2.2k
0
votes
0
replies
1.5k
views
Comment: Comment: The Practice of RADseq: Population Genomics Analysis with Stacks (RADS02) Early
24 months ago by Dave Carlson ★ 2.2k
1
vote
0
replies
1.2k
views
Answer: Answer: Cost for the deposition of sequencing data in GEO and SRA
2.0 years ago by Dave Carlson ★ 2.2k
0
votes
1
reply
2.7k
views
Comment: Comment: Large number of gaps at the beginning of alignments
2.0 years ago by Dave Carlson ★ 2.2k
0
votes
1
reply
1.7k
views
Comment: Comment: 10X scRNA-seq v2 odd fastq format
2.0 years ago by Dave Carlson ★ 2.2k
2
votes
0
replies
1.4k
views
Answer: Answer: Best pipeline / resources / tools for whole genome assembly in a haploid organis
2.0 years ago by Dave Carlson ★ 2.2k
2
votes
3
replies
1.7k
views
10X scRNA-seq v2 odd fastq format
10x scRNA-Seq
updated 2.0 years ago by ★ 4.7k • written 2.0 years ago by ★ 2.2k
0
votes
0
replies
1.4k
views
Comment: Comment: BAM file read stats (A/T/C/G/ins/del) for each base position
2.0 years ago by Dave Carlson ★ 2.2k
4
votes
1
reply
1.4k
views
Answer: Answer: BAM file read stats (A/T/C/G/ins/del) for each base position
2.0 years ago by Dave Carlson ★ 2.2k
1
vote
0
replies
665
views
Answer: Answer: First genomic coordinate that Nanopore read aligns to
2.0 years ago by Dave Carlson ★ 2.2k
1
vote
0
replies
1.3k
views
Comment: Comment: What are the definitions of the BBMerge outinsert table file?
2.1 years ago by Dave Carlson ★ 2.2k
0
votes
1
reply
1.3k
views
Comment: Comment: What are the definitions of the BBMerge outinsert table file?
2.1 years ago by Dave Carlson ★ 2.2k
1
vote
0
replies
1.5k
views
Comment: Comment: Low mapping percentage
2.3 years ago by Dave Carlson ★ 2.2k
0
votes
0
replies
1.5k
views
Comment: Comment: Help with understanding BBduk's behavior
2.3 years ago by Dave Carlson ★ 2.2k
1
vote
2
replies
1.5k
views
Help with understanding BBduk's behavior
BBduk kmer
2.3 years ago by Dave Carlson ★ 2.2k
1
vote
1
reply
1.3k
views
Comment: Comment: BBduk log and stats appear to be inconsistent
2.4 years ago by Dave Carlson ★ 2.2k
4
votes
3
replies
1.3k
views
BBduk log and stats appear to be inconsistent
bbduk bbmap
updated 2.4 years ago by 153k • written 2.4 years ago by ★ 2.2k
0
votes
0
replies
1.4k
views
Answer: Answer: How much resources does HiCanu need to assemble PacBio sequence
2.4 years ago by Dave Carlson ★ 2.2k
0
votes
1
reply
1.7k
views
Comment: Comment: Hoe calculate RPKM from RUVr?
2.4 years ago by Dave Carlson ★ 2.2k
4
votes
0
replies
7.2k
views
Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
2.5 years ago by Dave Carlson ★ 2.2k
0
votes
0
replies
1.2k
views
Answer: Answer: Journey from gene id to gene sequence
2.6 years ago by Dave Carlson ★ 2.2k
2
votes
0
replies
1.8k
views
Comment: Comment: What is the importance of partitions in phylogenomics analysis ?
2.6 years ago by Dave Carlson ★ 2.2k
1
vote
1
reply
1.7k
views
Comment: Comment: Use an annotated transcript in STAR but no .gtf file available
2.7 years ago by Dave Carlson ★ 2.2k
2
votes
1
reply
1.7k
views
Answer: Answer: Use an annotated transcript in STAR but no .gtf file available
2.7 years ago by Dave Carlson ★ 2.2k
2
votes
1
reply
2.2k
views
Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
2.7 years ago by Dave Carlson ★ 2.2k
225 results • Page 2 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6