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2
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Answer: Answer: Phylip/Paml alignment output file explanation ?
4.4 years ago by Dave Carlson ★ 2.2k
0
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1
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1.6k
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Comment: Comment: Issues downloading fastq data
4.4 years ago by Dave Carlson ★ 2.2k
0
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1
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5.1k
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Comment: Comment: extract unmapped reads from the paired end samples using hisat2
4.5 years ago by Dave Carlson ★ 2.2k
1
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1
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5.1k
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Comment: Comment: extract unmapped reads from the paired end samples using hisat2
4.5 years ago by Dave Carlson ★ 2.2k
1
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0
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8.0k
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Comment: Comment: Transcriptome assembly -- fastp vs Trimmomatic
4.5 years ago by Dave Carlson ★ 2.2k
0
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0
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4.2k
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Comment: Comment: Pipeline transposable elements
4.5 years ago by Dave Carlson ★ 2.2k
1
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0
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2.0k
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Answer: A: Interpreting first round of maker
4.5 years ago by Dave Carlson ★ 2.2k
3
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0
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1.7k
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Answer: A: Concatenating single gene alingments
4.5 years ago by Dave Carlson ★ 2.2k
1
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1
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1.6k
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Comment: C: OMA standalone, parallelization
4.5 years ago by Dave Carlson ★ 2.2k
0
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1
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16k
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Comment: C: Blastn, need help to increase speed
4.6 years ago by Dave Carlson ★ 2.2k
1
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1
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964
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Comment: C: Very strange duplicate output with stand alone blast
4.6 years ago by Dave Carlson ★ 2.2k
0
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0
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2.8k
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Comment: C: repeat masker output looks weird: 0% for all of repeat squences
4.6 years ago by Dave Carlson ★ 2.2k
2
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0
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3.2k
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Answer: A: Pacific Bio Long Reads vs Illumina Short Reads
4.6 years ago by Dave Carlson ★ 2.2k
1
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1
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1.5k
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Answer: A: Is there a site that provides genome size sort?
4.6 years ago by Dave Carlson ★ 2.2k
0
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0
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3.7k
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Answer: A: Split multifasta-file into multiple files according to a pattern in header
4.6 years ago by Dave Carlson ★ 2.2k
1
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1
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2.0k
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Comment: C: bcftools variant calling
4.6 years ago by Dave Carlson ★ 2.2k
3
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1
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2.0k
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Answer: A: bcftools variant calling
4.6 years ago by Dave Carlson ★ 2.2k
2
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2
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2.3k
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Answer: A: Help with parallelization and loop cutadapt
4.7 years ago by Dave Carlson ★ 2.2k
1
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1
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2.4k
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Comment: C: How does DEseq calculate p value when n=1?
4.8 years ago by Dave Carlson ★ 2.2k
0
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0
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3.2k
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Answer: A: vcf format to Mapmaker format
4.9 years ago by Dave Carlson ★ 2.2k
0
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0
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3.4k
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Comment: C: Gene ID's for a trinity assembled de novo transcriptome
5.0 years ago by Dave Carlson ★ 2.2k
2
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1
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3.4k
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Answer: C: Gene ID's for a trinity assembled de novo transcriptome
5.0 years ago by Dave Carlson ★ 2.2k
2
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0
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1.3k
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Comment: C: RNA-seq: how to handle biological replicates for differential expression analysi
5.0 years ago by Dave Carlson ★ 2.2k
2
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1
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929
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Compiling a list of MPI-compatible tools
software MPI
5.1 years ago by Dave Carlson ★ 2.2k
2
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0
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2.3k
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Answer: A: bowtie2 maximum value of MAPQ
5.1 years ago by Dave Carlson ★ 2.2k
0
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0
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4.1k
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Comment: C: How to remove gaps from sequence alignment?
5.1 years ago by Dave Carlson ★ 2.2k
2
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0
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6.3k
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Answer: A: prokka for several files at once
5.5 years ago by Dave Carlson ★ 2.2k
2
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0
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1.5k
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Answer: A: repeatmasker plain text into gtf
5.5 years ago by Dave Carlson ★ 2.2k
3
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1
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50k
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Answer: A: Up-to-date Online RNA Sequence Analysis Training/Courses/Papers?
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 2.2k
0
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1
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1.6k
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Comment: C: Has anyone used BP&P (Bayesian phylogenetics and phylogeography)?
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 2.2k
0
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1
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1.5k
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Comment: C: Assembling haplotypes of a highly heterozygous gene cluster with canu
5.8 years ago by Dave Carlson ★ 2.2k
0
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0
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1.5k
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Comment: C: Salmon RNA-seq quantification for repeated genome
5.8 years ago by Dave Carlson ★ 2.2k
0
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1
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1.5k
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Comment: C: Salmon RNA-seq quantification for repeated genome
5.8 years ago by Dave Carlson ★ 2.2k
1
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1
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3.0k
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Comment: C: How should I use skewer to trim paired end reads?
5.8 years ago by Dave Carlson ★ 2.2k
2
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0
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6.8k
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Answer: A: GATK multiple samples
5.9 years ago by Dave Carlson ★ 2.2k
2
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0
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2.5k
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Comment: C: How to make a phylogenetic tree set in ASTRAL?
5.9 years ago by Dave Carlson ★ 2.2k
0
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0
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8.2k
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Comment: C: Why wont my newick file from MEGA open in FigTree?
5.9 years ago by Dave Carlson ★ 2.2k
3
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0
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2.4k
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Answer: A: Removing the last part of fasta header in many alignmnet files
5.9 years ago by Dave Carlson ★ 2.2k
1
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0
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2.1k
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Comment: C: how to use Ka/Ks calculator
5.9 years ago by Dave Carlson ★ 2.2k
1
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0
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1.1k
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Answer: A: Remove and Substitute Fasta Header
5.9 years ago by Dave Carlson ★ 2.2k
1
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0
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15k
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Answer: A: Appropriate Podcasts For A Bioinformatician?
5.9 years ago by Dave Carlson ★ 2.2k
1
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2
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20k
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Comment: C: Pararellization in GATK 4
5.9 years ago by Dave Carlson ★ 2.2k
0
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0
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5.7k
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Comment: C: Determine adapter sequence in RNA-seq samples
5.9 years ago by Dave Carlson ★ 2.2k
0
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0
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4.4k
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Comment: C: GATK Best Practices HaplotypeCaller Multi-sample Error
6.0 years ago by Dave Carlson ★ 2.2k
2
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0
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1.4k
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Answer: A: New to NGS data Analysis
6.0 years ago by Dave Carlson ★ 2.2k
2
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2
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1.4k
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Suggestions for which genomes to use when removing microbial contamination with BBsplit
genome BBmap
updated 6.0 years ago by 20 • written 6.0 years ago by ★ 2.2k
1
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0
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4.6k
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Comment: C: Snakemake FastQC MissingOutputFiles ErrorM
6.0 years ago by Dave Carlson ★ 2.2k
0
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0
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4.9k
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Comment: C: What is ExcessHet key in the INFO field of a vcf file
6.0 years ago by Dave Carlson ★ 2.2k
1
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1
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4.9k
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Answer: A: What is ExcessHet key in the INFO field of a vcf file
6.0 years ago by Dave Carlson ★ 2.2k
0
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1
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1.3k
views
Comment: A: Probably very simple question for gffread
6.0 years ago by Dave Carlson ★ 2.2k
225 results • Page 4 of 5
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