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STARlong for pacbio Isoseq reads
STARlong STAR pacbio ISOSEQ
updated 15 hours ago by • 0 • written 19 hours ago by ★ 2.4k
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Comment: Comment: STARlong for pacbio Isoseq reads
18 hours ago by Buffo ★ 2.4k
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2.1k
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Comment: Comment: STARlong for pacbio Isoseq reads
18 hours ago by Buffo ★ 2.4k
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Comment: Comment: Low Mapping Rate with Kallisto on RNA-seq Data
10 days ago by Buffo ★ 2.4k
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815
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Answer: Answer: Coverage drop at assembly ends
5 months ago by Buffo ★ 2.4k
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760
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Comment: Comment: enrichGo problem
6 months ago by Buffo ★ 2.4k
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769
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Answer: Answer: Using other individuals and related species to improve a de novo genome assembly
6 months ago by Buffo ★ 2.4k
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640
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Comment: Comment: Training Augustus for Gene Prediction
6 months ago by Buffo ★ 2.4k
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672
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Comment: Comment: How to predict targets of miRNAs with indels in the seed region?
updated 7 months ago by 89k • written 7 months ago by ★ 2.4k
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Comment: Comment: gene expression normaliztion
15 months ago by Buffo ★ 2.4k
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Answer: Answer: gene expression normaliztion
15 months ago by Buffo ★ 2.4k
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Comment: Comment: BRAKER3 genome annotation
17 months ago by Buffo ★ 2.4k
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Comment: Comment: BRAKER3 genome annotation
17 months ago by Buffo ★ 2.4k
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Comment: Comment: For high quality Telomere to telomere assemblies, is short read polishing still
2.0 years ago by Buffo ★ 2.4k
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2.3k
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Answer: Answer: For high quality Telomere to telomere assemblies, is short read polishing still
2.0 years ago by Buffo ★ 2.4k
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Comment: Comment: Parasite genome assembly
2.1 years ago by Buffo ★ 2.4k
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Answer: Answer: Can retrogenes keep their introns?
2.1 years ago by Buffo ★ 2.4k
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Comment: Comment: search for intron conservancy across species
2.2 years ago by Buffo ★ 2.4k
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Comment: Comment: search for intron conservancy across species
2.2 years ago by Buffo ★ 2.4k
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2.5k
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Comment: Comment: search for intron conservancy across species
2.2 years ago by Buffo ★ 2.4k
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2.5k
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Comment: Comment: search for intron conservancy across species
2.2 years ago by Buffo ★ 2.4k
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1
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2.5k
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Comment: Comment: search for intron conservancy across species
2.2 years ago by Buffo ★ 2.4k
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11
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2.5k
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search for intron conservancy across species
intron oma intronDB splicing
2.2 years ago by Buffo ★ 2.4k
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Answer: Answer: calculating read depth via a for in loop over many fastq files ?
2.2 years ago by Buffo ★ 2.4k
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1
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925
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Answer: Answer: How to detect unknown primer sequence
2.2 years ago by Buffo ★ 2.4k
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Comment: Comment: Adding 'gene_name' attribute to each row of GTF/GFF file (missing for CDS, trans
2.2 years ago by Buffo ★ 2.4k
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1
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4.8k
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Comment: Comment: Adding 'gene_name' attribute to each row of GTF/GFF file (missing for CDS, trans
2.2 years ago by Buffo ★ 2.4k
2
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1
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4.8k
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Comment: Comment: Adding 'gene_name' attribute to each row of GTF/GFF file (missing for CDS, trans
2.2 years ago by Buffo ★ 2.4k
1
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Comment: Comment: Identify Alternative Splicing Event using exon and junction count table
2.2 years ago by Buffo ★ 2.4k
2
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1
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4.8k
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Comment: Comment: Adding 'gene_name' attribute to each row of GTF/GFF file (missing for CDS, trans
2.2 years ago by Buffo ★ 2.4k
2
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1
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4.8k
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Comment: Comment: Adding 'gene_name' attribute to each row of GTF/GFF file (missing for CDS, trans
2.2 years ago by Buffo ★ 2.4k
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1
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1.8k
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Answer: Answer: BAM file contains much more reads than expected
2.2 years ago by Buffo ★ 2.4k
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0
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988
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Answer: Answer: BRAKER for large genome?
2.2 years ago by Buffo ★ 2.4k
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0
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809
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Answer: Answer: Tools for getting significant interactions in the HiC-data?
2.2 years ago by Buffo ★ 2.4k
1
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2
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1.3k
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Answer: Answer: methylation anysis
2.2 years ago by Buffo ★ 2.4k
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1
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3.9k
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Comment: Comment: Get relationships and hierarchies for GO terms
2.3 years ago by Buffo ★ 2.4k
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1
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1.0k
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Comment: Comment: how to look for interactions between different chromosomes
2.3 years ago by Buffo ★ 2.4k
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1.0k
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Comment: Comment: highlight regions in a dot-plot?
2.3 years ago by Buffo ★ 2.4k
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1
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1.5k
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Comment: Comment: Repbase database and transposon sequence
2.3 years ago by Buffo ★ 2.4k
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2
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1.0k
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highlight regions in a dot-plot?
figure dotplot alignment synteny
2.3 years ago by Buffo ★ 2.4k
2
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0
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1.7k
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Comment: Comment: How to pass from DNA to AA fasta
2.3 years ago by Buffo ★ 2.4k
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1
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1.7k
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Comment: Comment: How to pass from DNA to AA fasta
2.3 years ago by Buffo ★ 2.4k
2
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0
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Answer: Answer: Salmon for RNAseq alignement?
2.4 years ago by Buffo ★ 2.4k
1
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1
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1.1k
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Answer: Answer: Bowtie2 alignment on metagenomics - sum same sequence
2.4 years ago by Buffo ★ 2.4k
4
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2
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4.8k
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Answer: Answer: Adding 'gene_name' attribute to each row of GTF/GFF file (missing for CDS, trans
2.4 years ago by Buffo ★ 2.4k
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0
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1.3k
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Comment: Comment: SnpEff eff Error
2.4 years ago by Buffo ★ 2.4k
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1.3k
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Comment: Comment: SnpEff eff Error
2.4 years ago by Buffo ★ 2.4k
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1
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1.9k
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Answer: Answer: BLASTN for very short sequence
2.4 years ago by Buffo ★ 2.4k
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2
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3.2k
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Answer: Answer: How to convert GTF output of TSEBRA to gff3 file as an input for EVM ?
2.4 years ago by Buffo ★ 2.4k
1
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1
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2.9k
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Answer: Answer: Warning: [tblastn] Examining 5 or more matches is recommended
2.4 years ago by Buffo ★ 2.4k
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