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2.2k
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Comment: Comment: NGS forensics: how to know if data is fabricated
18 days ago by ATpoint 82k
2
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0
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434
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Answer: Answer: Source other conda environments in a nextflow pipeline when nextflow itself is i
19 days ago by ATpoint 82k
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0
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447
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Comment: Comment: PCA plot
19 days ago by ATpoint 82k
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0
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3.8k
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Comment: Comment: Treatment VS Control in Single Cell RNAseq analysis
20 days ago by ATpoint 82k
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0
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264
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Comment: Comment: Normalize scRNAseq data to housekeeping genes to compare several datasets
20 days ago by ATpoint 82k
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0
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367
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Answer: Answer: Sequence read length shorter than flow cell specification
20 days ago by ATpoint 82k
0
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1
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413
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Comment: Comment: Highest variable features in single cell data
20 days ago by ATpoint 82k
2
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0
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601
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Comment: Comment: To get p-values for the TPM
21 days ago by ATpoint 82k
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405
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Comment: Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
22 days ago by ATpoint 82k
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1
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424
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
22 days ago by ATpoint 82k
4
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323
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Answer: Answer: Gene set enrichment analysis differences between 2020 and 2024
23 days ago by ATpoint 82k
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0
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158
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Comment: Comment: Displaced fragment length distribution in ATAC-seq
23 days ago by ATpoint 82k
1
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1
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343
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Comment: Comment: Per base sequence content error in RNAseq analysis
23 days ago by ATpoint 82k
1
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1
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405
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Answer: Answer: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
23 days ago by ATpoint 82k
0
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1
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343
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Answer: Answer: Per base sequence content error in RNAseq analysis
23 days ago by ATpoint 82k
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0
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612
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Answer: Answer: how to find genes that are significantly expressed in brain cortex samples
25 days ago by ATpoint 82k
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0
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1.9k
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Comment: Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
25 days ago by ATpoint 82k
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0
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1.4k
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Comment: Comment: Cellranger count error: Input FASTQ file ended prematurely
25 days ago by ATpoint 82k
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0
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322
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Comment: Comment: Could you please assist in identifying this cluster?
26 days ago by ATpoint 82k
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0
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5.3k
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Comment: Comment: Memory usage of picard Samsort
26 days ago by ATpoint 82k
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0
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307
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Answer: Answer: DEseq2
27 days ago by ATpoint 82k
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0
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553
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Comment: Comment: Integration of transcriptomics and proteomics: difficult matching names
29 days ago by ATpoint 82k
2
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0
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348
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Comment: Comment: Bwa sampe - BGI
29 days ago by ATpoint 82k
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0
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418
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Comment: Comment: Ensembl gene id conversion
29 days ago by ATpoint 82k
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1
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422
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Answer: Answer: Which experiments generate Position Frequency Matrix?
29 days ago by ATpoint 82k
0
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1
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303
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Comment: Comment: Statistical Advice Needed for RNAseq Data Analysis
29 days ago by ATpoint 82k
1
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1
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314
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Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
29 days ago by ATpoint 82k
0
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0
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246
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Comment: Comment: Error in edgeR/Deseq2 Analysis
29 days ago by ATpoint 82k
2
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1
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422
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Answer: Answer: I am new to single cell analysis. Can RNA velocity (spliced/unspliced) be calcul
29 days ago by ATpoint 82k
3
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2
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379
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Answer: Answer: I'm new to cell ranger. Can single cells prepared with a protocol other than the
29 days ago by ATpoint 82k
1
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0
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455
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Comment: Comment: Deseq2 : Paired analysis or otherwise
4 weeks ago by ATpoint 82k
0
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1
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23k
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Comment: Comment: Gene Set Enrichment Analysis
4 weeks ago by ATpoint 82k
1
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1
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455
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Answer: Answer: Deseq2 : Paired analysis or otherwise
4 weeks ago by ATpoint 82k
0
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0
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386
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
4 weeks ago by ATpoint 82k
1
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0
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286
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Answer: Answer: How to handle more than 1 SRA Run per Experiment?
4 weeks ago by ATpoint 82k
1
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0
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306
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
4 weeks ago by ATpoint 82k
0
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1
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365
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Comment: Comment: Questions about transfering wgs file to reference genome file
4 weeks ago by ATpoint 82k
0
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1
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1.0k
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Comment: Comment: RNAseq of primary tumor and metastases in two different organ
4 weeks ago by ATpoint 82k
0
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1
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365
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Comment: Comment: Questions about transfering wgs file to reference genome file
4 weeks ago by ATpoint 82k
0
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0
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2.4k
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Comment: Comment: Shannon vs Simpson for TCR diversity estimation
4 weeks ago by ATpoint 82k
0
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1
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386
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
4 weeks ago by ATpoint 82k
1
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0
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197
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Answer: Answer: Shared pathways up in disease blood and tissue relative to healthy blood (scRNA-
5 weeks ago by ATpoint 82k
0
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1
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1.3k
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Comment: Comment: ¿How I know if it is a batch effect or are real differences between my controls
5 weeks ago by ATpoint 82k
0
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0
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413
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Comment: Comment: lncRNA from TCGA
5 weeks ago by ATpoint 82k
0
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1
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393
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Comment: Comment: WGCNA website
5 weeks ago by ATpoint 82k
1
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0
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248
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Comment: Comment: TMM normalization with DESeq2
6 weeks ago by ATpoint 82k
0
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1
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248
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Answer: Answer: TMM normalization with DESeq2
updated 6 weeks ago by 43k • written 6 weeks ago by 82k
1
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0
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207
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Comment: Comment: Batch effect issue in RNA velocity analysis
6 weeks ago by ATpoint 82k
1
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1
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395
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Comment: Comment: Single cell analysis with "meta".tsv.gz file
6 weeks ago by ATpoint 82k
1
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0
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403
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Comment: Comment: Homer giving troubles
6 weeks ago by ATpoint 82k
9,716 results • Page 2 of 195
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