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174
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Comment: Comment: Batch effect issue in RNA velocity analysis
26 days ago by ATpoint 82k
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1
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364
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Comment: Comment: Single cell analysis with "meta".tsv.gz file
26 days ago by ATpoint 82k
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379
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Comment: Comment: Homer giving troubles
26 days ago by ATpoint 82k
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259
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Comment: Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
26 days ago by ATpoint 82k
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262
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Comment: Comment: can't download and use mageck-vispr for R?
26 days ago by ATpoint 82k
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182
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Answer: Answer: Can't download txdbmaker package
26 days ago by ATpoint 82k
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0
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483
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Comment: Comment: Installing Cell Ranger
27 days ago by ATpoint 82k
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248
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Comment: Comment: What are crucial apps/ scripts for cancer genome/data analysis that can be set
27 days ago by ATpoint 82k
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1
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284
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Comment: Comment: Removing batch effect using combat-seq
27 days ago by ATpoint 82k
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1
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483
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Comment: Comment: Installing Cell Ranger
27 days ago by ATpoint 82k
1
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1
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284
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Comment: Comment: Removing batch effect using combat-seq
27 days ago by ATpoint 82k
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1
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379
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Answer: Answer: Homer giving troubles
28 days ago by ATpoint 82k
4
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300
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Answer: Answer: Seeking Proper Interpretation of Dispersion Graph: A Call for Statistical and Bi
29 days ago by ATpoint 82k
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419
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Comment: Comment: Problem generating paired end reads when converting Cell Ranger's BAM result to
4 weeks ago by ATpoint 82k
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266
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Answer: Answer: How to calculate depth of coverage and applying read depth filter
4 weeks ago by ATpoint 82k
2
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1
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419
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Answer: Answer: Problem generating paired end reads when converting Cell Ranger's BAM result to
4 weeks ago by ATpoint 82k
3
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1
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266
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Comment: Comment: Gene reads all zero for each sample
4 weeks ago by ATpoint 82k
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0
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238
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Comment: Comment: Flow Cytometry Data Analysis by Seurat
4 weeks ago by ATpoint 82k
3
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1
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339
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Comment: Comment: Volcano Plot Output Inquiry: Graphs Facing Down
4 weeks ago by ATpoint 82k
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1
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11k
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Comment: Comment: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
4 weeks ago by ATpoint 82k
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1
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628
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Comment: Comment: Piping samtools to R
4 weeks ago by ATpoint 82k
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1
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628
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Comment: Comment: Piping samtools to R
4 weeks ago by ATpoint 82k
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1
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220
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Comment: Comment: Error with goodSamplesGenes()
4 weeks ago by ATpoint 82k
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1
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417
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Answer: Answer: Limma compare between 3 conditions vs 2 conditions
4 weeks ago by ATpoint 82k
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1
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444
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Comment: Comment: Salmon Quantification in Alignment based-mode
4 weeks ago by ATpoint 82k
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2
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272
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Comment: Comment: High number of detected genes per cell after doublet removal - scRNAseq data
4 weeks ago by ATpoint 82k
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1
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254
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Comment: Comment: Cell communacations analysis. I only have the proteome of one type of cell
4 weeks ago by ATpoint 82k
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1
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264
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Comment: Comment: Is it possible to see so little adipocyte in white adipose tissue?
updated 4 weeks ago by 43k • written 4 weeks ago by 82k
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265
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Comment: Comment: Deseq generating warning "the model matrix is not full rank"
4 weeks ago by ATpoint 82k
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1
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251
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Answer: Answer: Using velocyto on 3'UTR 10x single-cell RNA-Seq data
4 weeks ago by ATpoint 82k
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1
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253
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Comment: Comment: how to run limma for large datasets
4 weeks ago by ATpoint 82k
1
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222
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Answer: Answer: Can I use this community for software development?
4 weeks ago by ATpoint 82k
0
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0
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565
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Answer: Answer: calculating mean fragment length from CollectInsertSizeMetrics(Picard) output
5 weeks ago by ATpoint 82k
1
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1
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522
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Comment: Comment: Quest about the input data for PCA analysis
5 weeks ago by ATpoint 82k
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185
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Comment: Comment: Adding gene to GRange objects with single base
5 weeks ago by ATpoint 82k
2
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247
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Comment: Comment: Disease Prevalence Database/Disease Incidence Database
5 weeks ago by ATpoint 82k
2
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1
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302
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Answer: Answer: How to visualize scRNA-seq normalized data
5 weeks ago by ATpoint 82k
2
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1
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263
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Answer: Answer: Infering the cell composition from bulk RNA-seq data for mouse
5 weeks ago by ATpoint 82k
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1
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238
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Answer: Answer: Gene set to perform GSVA
5 weeks ago by ATpoint 82k
1
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1
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321
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Answer: Answer: Length by gene from salmon
5 weeks ago by ATpoint 82k
1
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1
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594
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Comment: Comment: Applicability of the SoupX ambient mRNA decontamination technique to fixed and/o
5 weeks ago by ATpoint 82k
1
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1
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473
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Comment: Comment: Single cluster spanning in different locations in UMAP in scRNAseq data
5 weeks ago by ATpoint 82k
1
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0
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392
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Comment: Comment: scRNAseq normalization
5 weeks ago by ATpoint 82k
1
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1
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392
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Answer: Answer: scRNAseq normalization
5 weeks ago by ATpoint 82k
1
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1
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367
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Comment: Comment: Average expression of a sample in single-cell data
5 weeks ago by ATpoint 82k
0
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1
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802
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Comment: Comment: t-test in two groups, multiple rows
5 weeks ago by ATpoint 82k
0
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1
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565
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Comment: Comment: calculating mean fragment length from CollectInsertSizeMetrics(Picard) output
5 weeks ago by ATpoint 82k
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1
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232
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Comment: Comment: FASTA/FASTQ files of fetal Aneuploids
5 weeks ago by ATpoint 82k
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0
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1.5k
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Comment: Comment: sam.gz files to bam using samtools
5 weeks ago by ATpoint 82k
0
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2
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802
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Comment: Comment: t-test in two groups, multiple rows
6 weeks ago by ATpoint 82k
9,669 results • Page 2 of 194
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