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Comment: Comment: PCA plot
18 days ago by ATpoint 82k
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3.7k
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Comment: Comment: Treatment VS Control in Single Cell RNAseq analysis
19 days ago by ATpoint 82k
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263
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Comment: Comment: Normalize scRNAseq data to housekeeping genes to compare several datasets
19 days ago by ATpoint 82k
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364
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Answer: Answer: Sequence read length shorter than flow cell specification
19 days ago by ATpoint 82k
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1
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407
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Comment: Comment: Highest variable features in single cell data
19 days ago by ATpoint 82k
2
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0
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592
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Comment: Comment: To get p-values for the TPM
20 days ago by ATpoint 82k
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1
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399
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Comment: Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
21 days ago by ATpoint 82k
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1
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418
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
21 days ago by ATpoint 82k
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319
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Answer: Answer: Gene set enrichment analysis differences between 2020 and 2024
22 days ago by ATpoint 82k
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158
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Comment: Comment: Displaced fragment length distribution in ATAC-seq
22 days ago by ATpoint 82k
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1
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339
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Comment: Comment: Per base sequence content error in RNAseq analysis
22 days ago by ATpoint 82k
1
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1
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399
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Answer: Answer: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
22 days ago by ATpoint 82k
0
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1
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339
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Answer: Answer: Per base sequence content error in RNAseq analysis
22 days ago by ATpoint 82k
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0
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609
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Answer: Answer: how to find genes that are significantly expressed in brain cortex samples
24 days ago by ATpoint 82k
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0
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1.9k
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Comment: Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
24 days ago by ATpoint 82k
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0
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1.4k
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Comment: Comment: Cellranger count error: Input FASTQ file ended prematurely
24 days ago by ATpoint 82k
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319
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Comment: Comment: Could you please assist in identifying this cluster?
25 days ago by ATpoint 82k
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5.3k
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Comment: Comment: Memory usage of picard Samsort
25 days ago by ATpoint 82k
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306
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Answer: Answer: DEseq2
26 days ago by ATpoint 82k
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553
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Comment: Comment: Integration of transcriptomics and proteomics: difficult matching names
28 days ago by ATpoint 82k
2
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347
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Comment: Comment: Bwa sampe - BGI
28 days ago by ATpoint 82k
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0
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416
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Comment: Comment: Ensembl gene id conversion
28 days ago by ATpoint 82k
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1
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420
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Answer: Answer: Which experiments generate Position Frequency Matrix?
28 days ago by ATpoint 82k
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1
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303
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Comment: Comment: Statistical Advice Needed for RNAseq Data Analysis
28 days ago by ATpoint 82k
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1
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313
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Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
28 days ago by ATpoint 82k
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246
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Comment: Comment: Error in edgeR/Deseq2 Analysis
28 days ago by ATpoint 82k
2
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1
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422
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Answer: Answer: I am new to single cell analysis. Can RNA velocity (spliced/unspliced) be calcul
28 days ago by ATpoint 82k
3
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2
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378
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Answer: Answer: I'm new to cell ranger. Can single cells prepared with a protocol other than the
28 days ago by ATpoint 82k
1
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0
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447
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Comment: Comment: Deseq2 : Paired analysis or otherwise
29 days ago by ATpoint 82k
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1
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23k
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Comment: Comment: Gene Set Enrichment Analysis
4 weeks ago by ATpoint 82k
1
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1
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447
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Answer: Answer: Deseq2 : Paired analysis or otherwise
4 weeks ago by ATpoint 82k
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0
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380
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
4 weeks ago by ATpoint 82k
1
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0
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285
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Answer: Answer: How to handle more than 1 SRA Run per Experiment?
4 weeks ago by ATpoint 82k
1
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0
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304
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
4 weeks ago by ATpoint 82k
0
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1
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360
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Comment: Comment: Questions about transfering wgs file to reference genome file
4 weeks ago by ATpoint 82k
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1
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999
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Comment: Comment: RNAseq of primary tumor and metastases in two different organ
4 weeks ago by ATpoint 82k
0
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1
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360
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Comment: Comment: Questions about transfering wgs file to reference genome file
4 weeks ago by ATpoint 82k
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0
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2.4k
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Comment: Comment: Shannon vs Simpson for TCR diversity estimation
4 weeks ago by ATpoint 82k
0
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1
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380
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
4 weeks ago by ATpoint 82k
1
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0
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196
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Answer: Answer: Shared pathways up in disease blood and tissue relative to healthy blood (scRNA-
4 weeks ago by ATpoint 82k
0
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1
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1.2k
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Comment: Comment: ¿How I know if it is a batch effect or are real differences between my controls
5 weeks ago by ATpoint 82k
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0
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409
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Comment: Comment: lncRNA from TCGA
5 weeks ago by ATpoint 82k
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1
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390
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Comment: Comment: WGCNA website
5 weeks ago by ATpoint 82k
1
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0
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244
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Comment: Comment: TMM normalization with DESeq2
6 weeks ago by ATpoint 82k
0
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1
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244
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Answer: Answer: TMM normalization with DESeq2
updated 6 weeks ago by 43k • written 6 weeks ago by 82k
1
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0
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205
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Comment: Comment: Batch effect issue in RNA velocity analysis
6 weeks ago by ATpoint 82k
1
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1
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393
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Comment: Comment: Single cell analysis with "meta".tsv.gz file
6 weeks ago by ATpoint 82k
1
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0
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399
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Comment: Comment: Homer giving troubles
6 weeks ago by ATpoint 82k
1
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2
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283
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Comment: Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
6 weeks ago by ATpoint 82k
0
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0
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287
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Comment: Comment: can't download and use mageck-vispr for R?
6 weeks ago by ATpoint 82k
9,714 results • Page 2 of 195
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