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Answer: Answer: Can't download txdbmaker package
6 weeks ago by ATpoint 82k
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572
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Comment: Comment: Installing Cell Ranger
6 weeks ago by ATpoint 82k
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272
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Comment: Comment: What are crucial apps/ scripts for cancer genome/data analysis that can be set
6 weeks ago by ATpoint 82k
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318
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Comment: Comment: Removing batch effect using combat-seq
6 weeks ago by ATpoint 82k
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572
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Comment: Comment: Installing Cell Ranger
6 weeks ago by ATpoint 82k
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318
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Comment: Comment: Removing batch effect using combat-seq
6 weeks ago by ATpoint 82k
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400
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Answer: Answer: Homer giving troubles
6 weeks ago by ATpoint 82k
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318
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Answer: Answer: Seeking Proper Interpretation of Dispersion Graph: A Call for Statistical and Bi
6 weeks ago by ATpoint 82k
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435
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Comment: Comment: Problem generating paired end reads when converting Cell Ranger's BAM result to
6 weeks ago by ATpoint 82k
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282
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Answer: Answer: How to calculate depth of coverage and applying read depth filter
6 weeks ago by ATpoint 82k
2
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435
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Answer: Answer: Problem generating paired end reads when converting Cell Ranger's BAM result to
6 weeks ago by ATpoint 82k
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282
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Comment: Comment: Gene reads all zero for each sample
6 weeks ago by ATpoint 82k
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259
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Comment: Comment: Flow Cytometry Data Analysis by Seurat
6 weeks ago by ATpoint 82k
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358
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Comment: Comment: Volcano Plot Output Inquiry: Graphs Facing Down
6 weeks ago by ATpoint 82k
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11k
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Comment: Comment: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
6 weeks ago by ATpoint 82k
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690
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Comment: Comment: Piping samtools to R
6 weeks ago by ATpoint 82k
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690
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Comment: Comment: Piping samtools to R
6 weeks ago by ATpoint 82k
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230
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Comment: Comment: Error with goodSamplesGenes()
6 weeks ago by ATpoint 82k
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433
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Answer: Answer: Limma compare between 3 conditions vs 2 conditions
6 weeks ago by ATpoint 82k
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465
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Comment: Comment: Salmon Quantification in Alignment based-mode
6 weeks ago by ATpoint 82k
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2
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287
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Comment: Comment: High number of detected genes per cell after doublet removal - scRNAseq data
6 weeks ago by ATpoint 82k
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265
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Comment: Comment: Cell communacations analysis. I only have the proteome of one type of cell
7 weeks ago by ATpoint 82k
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273
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Comment: Comment: Is it possible to see so little adipocyte in white adipose tissue?
updated 7 weeks ago by 43k • written 7 weeks ago by 82k
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274
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Comment: Comment: Deseq generating warning "the model matrix is not full rank"
7 weeks ago by ATpoint 82k
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268
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Answer: Answer: Using velocyto on 3'UTR 10x single-cell RNA-Seq data
7 weeks ago by ATpoint 82k
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267
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Comment: Comment: how to run limma for large datasets
7 weeks ago by ATpoint 82k
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243
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Answer: Answer: Can I use this community for software development?
7 weeks ago by ATpoint 82k
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598
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Answer: Answer: calculating mean fragment length from CollectInsertSizeMetrics(Picard) output
7 weeks ago by ATpoint 82k
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1
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540
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Comment: Comment: Quest about the input data for PCA analysis
7 weeks ago by ATpoint 82k
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192
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Comment: Comment: Adding gene to GRange objects with single base
7 weeks ago by ATpoint 82k
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256
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Comment: Comment: Disease Prevalence Database/Disease Incidence Database
7 weeks ago by ATpoint 82k
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316
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Answer: Answer: How to visualize scRNA-seq normalized data
7 weeks ago by ATpoint 82k
2
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271
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Answer: Answer: Infering the cell composition from bulk RNA-seq data for mouse
7 weeks ago by ATpoint 82k
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248
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Answer: Answer: Gene set to perform GSVA
7 weeks ago by ATpoint 82k
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331
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Answer: Answer: Length by gene from salmon
8 weeks ago by ATpoint 82k
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1
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623
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Comment: Comment: Applicability of the SoupX ambient mRNA decontamination technique to fixed and/o
8 weeks ago by ATpoint 82k
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510
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Comment: Comment: Single cluster spanning in different locations in UMAP in scRNAseq data
8 weeks ago by ATpoint 82k
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411
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Comment: Comment: scRNAseq normalization
8 weeks ago by ATpoint 82k
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411
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Answer: Answer: scRNAseq normalization
8 weeks ago by ATpoint 82k
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383
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Comment: Comment: Average expression of a sample in single-cell data
8 weeks ago by ATpoint 82k
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835
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Comment: Comment: t-test in two groups, multiple rows
8 weeks ago by ATpoint 82k
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1
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598
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Comment: Comment: calculating mean fragment length from CollectInsertSizeMetrics(Picard) output
8 weeks ago by ATpoint 82k
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241
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Comment: Comment: FASTA/FASTQ files of fetal Aneuploids
8 weeks ago by ATpoint 82k
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1.6k
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Comment: Comment: sam.gz files to bam using samtools
8 weeks ago by ATpoint 82k
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2
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835
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Comment: Comment: t-test in two groups, multiple rows
8 weeks ago by ATpoint 82k
2
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296
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Answer: Answer: Compute p-value, having log fold change
8 weeks ago by ATpoint 82k
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1
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298
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Comment: Comment: What GC content should I expect?
8 weeks ago by ATpoint 82k
2
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835
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Answer: Answer: t-test in two groups, multiple rows
8 weeks ago by ATpoint 82k
2
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1
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398
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Answer: Answer: With DESeq2 "Not full rank" Error with design
8 weeks ago by ATpoint 82k
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0
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245
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Answer: Answer: Seeking Advice on Pre-processing Single Cell Data for Gene Mapping
8 weeks ago by ATpoint 82k
9,714 results • Page 3 of 195
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