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Comment: C: How to handle multiple contig outputs from de novo assemblers when one contig is
4.8 years ago by colindaven 8.0k
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878
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Answer: A: Find repeat regions on 100 eukaryotic assemblies
4.8 years ago by colindaven 8.0k
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Comment: C: Best open source genome browser in 2020
4.8 years ago by colindaven 8.0k
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7.0k
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Answer: A: Best open source genome browser in 2020
4.8 years ago by colindaven 8.0k
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3.8k
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Comment: C: RIP CentOS, CentOS 8 to be EOL'd in 2021
4.8 years ago by colindaven 8.0k
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869
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Comment: C: Searching subreads used to assemble contig of interest (canu)
4.8 years ago by colindaven 8.0k
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831
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Answer: A: can i detect regulatory proteins with co-expression network?
4.8 years ago by colindaven 8.0k
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6.0k
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Comment: C: filtering out nanopore reads by alignment score
4.8 years ago by colindaven 8.0k
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3.4k
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Answer: A: Combining nanopore libraries
4.8 years ago by colindaven 8.0k
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787
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Comment: C: confirm assembly in pan-genome analysis
4.9 years ago by colindaven 8.0k
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614
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Comment: C: Multispecies fastq file - identification of SNP
4.9 years ago by colindaven 8.0k
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725
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Answer: A: Blasting two databases
4.9 years ago by colindaven 8.0k
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905
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Job: Experienced specialist NGS scRNA-seq/RNA-seq at Hannover Medical School in Hannover, Germany
R RNA-Seq single-cell sequencing
updated 2.3 years ago by 45k • written 4.9 years ago by 8.0k
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1.5k
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Answer: A: Extract reads based on the orientation of the mapped reads.
4.9 years ago by colindaven 8.0k
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1.3k
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Comment: C: denovo assembly using soap denovo
4.9 years ago by colindaven 8.0k
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1.1k
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Comment: C: bacterial genome assembly with nano pore sequence data
4.9 years ago by colindaven 8.0k
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1.7k
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Comment: C: Suggestion for tools to data transfer
4.9 years ago by colindaven 8.0k
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896
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Answer: A: Inside a .sam file, how do I know which read maps where to which scaffold in the
4.9 years ago by colindaven 8.0k
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989
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Answer: A: Aligning & Comparing References for SNPs / Indels
4.9 years ago by colindaven 8.0k
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2.3k
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Comment: C: error: BAM to FASTQ
4.9 years ago by colindaven 8.0k
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1.3k
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Comment: C: Having made a paired-end and stranded-forward sequencing (NGS) implies that I wi
4.9 years ago by colindaven 8.0k
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2.3k
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Answer: A: Getting reference genome for vcf2maf tool
4.9 years ago by colindaven 8.0k
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12k
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Answer: A: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
4.9 years ago by colindaven 8.0k
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1.9k
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Answer: A: while running ONT(nanopore) bioinforamtics pipeline, fasta files are not generat
5.0 years ago by colindaven 8.0k
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3.8k
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Comment: C: Extend 3' UTR of a GTF file
5.0 years ago by colindaven 8.0k
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3.3k
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Answer: A: E: Package 'tophat' has no installation candidate
5.0 years ago by colindaven 8.0k
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1.2k
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Comment: C: NGS bam file reference-guided assembly
5.0 years ago by colindaven 8.0k
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1
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3.8k
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Comment: C: Extend 3' UTR of a GTF file
5.0 years ago by colindaven 8.0k
2
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1.7k
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Answer: A: Looking for easy to use eukaryotic genome annotation pipeline?
5.0 years ago by colindaven 8.0k
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3.0k
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Comment: C: Human transposable elements
5.0 years ago by colindaven 8.0k
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2.4k
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Comment: C: GTF/GFF3 file compatible with (GRCh38/hg38)(hg38)
5.0 years ago by colindaven 8.0k
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1.8k
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Answer: A: how Gap closer can fill gaps in scafolds
5.0 years ago by colindaven 8.0k
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3.2k
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Answer: A: Racon polishing script that maps long reads and does racon polishing continuousl
5.0 years ago by colindaven 8.0k
2
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1
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4.0k
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Answer: A: Adapter trimming by Trimmomatic - Nextera Library
5.0 years ago by colindaven 8.0k
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1.2k
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Answer: A: NGS bam file reference-guided assembly
5.0 years ago by colindaven 8.0k
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Comment: C: How to download FASTA protein sequences for Escherichia coli strains from Ensemb
5.0 years ago by colindaven 8.0k
2
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1.5k
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Answer: A: Where to find paired solid tumor WES raw data (tumor/tumor margin) that I can do
5.0 years ago by colindaven 8.0k
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3.0k
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Comment: C: Polishing Nanopore data
5.1 years ago by colindaven 8.0k
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3.3k
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Comment: C: Estimating genome size
5.1 years ago by colindaven 8.0k
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1.7k
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Answer: A: Good Books/Resources to learn metagenomic analysis?
5.1 years ago by colindaven 8.0k
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1.9k
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Comment: C: Error in freebayes SNP calling
5.1 years ago by colindaven 8.0k
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1
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1.9k
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Comment: C: Error in freebayes SNP calling
5.1 years ago by colindaven 8.0k
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1.3k
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Answer: A: mix of strains
5.1 years ago by colindaven 8.0k
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2.5k
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Comment: C: Finding unique variants in a vcf
5.1 years ago by colindaven 8.0k
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2.5k
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Comment: C: Finding unique variants in a vcf
5.1 years ago by colindaven 8.0k
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4.5k
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Answer: Answer: GAF format from vg
2.6 years ago by colindaven 8.0k
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3
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4.5k
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GAF format from vg
vg Assembly
2.6 years ago by colindaven 8.0k
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2.7k
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Answer: A: How to extract reads that map with BWA exactly twice
5.2 years ago by colindaven 8.0k
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646
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Answer: A: Find SNVs that creates GT or AG Splicing
5.2 years ago by colindaven 8.0k
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1.2k
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Answer: A: Time to align full-length transcripts against a reference
5.2 years ago by colindaven 8.0k
1,105 results • Page 15 of 23
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