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Answer: Answer: Chromosome bias on RNA-Seq differential gene expression analysis
7 months ago by Charles Murtaugh ▴ 50
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468
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Making use of relative density of genomic features between gene sets
distributions weighting genomics
updated 10 months ago by 19k • written 10 months ago by ▴ 50
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1
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516
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using GRanges metadata to constrain overlap searches between objects
plyranges Bioconductor GRanges R GenomicRanges
updated 13 months ago by 11k • written 13 months ago by ▴ 50
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780
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Comment: Comment: method for querying gnomAD with long list of "uncharacterized" variants
14 months ago by Charles Murtaugh ▴ 50
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3
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780
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method for querying gnomAD with long list of "uncharacterized" variants
R gnomAD variant GenomicRanges
updated 14 months ago by 43k • written 14 months ago by ▴ 50
6
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3
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1.1k
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is the lowest numbered Ensembl transcript ID always the "canonical" transcript?
transcript ensembl bioconductor r
updated 2.5 years ago by 23k • written 2.5 years ago by ▴ 50
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Comment: Comment: trying to make nice-looking plot of gene structure with mutations
2.5 years ago by Charles Murtaugh ▴ 50
2
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2
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1.8k
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trying to make nice-looking plot of gene structure with mutations
ggbio genome mutation visualization r
2.5 years ago by Charles Murtaugh ▴ 50
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1.1k
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Comment: Comment: question about Mutation Annotation Format (MAF) variant classifications
2.7 years ago by Charles Murtaugh ▴ 50
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1.1k
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question about Mutation Annotation Format (MAF) variant classifications
annotation ICGC MAF R
2.7 years ago by Charles Murtaugh ▴ 50
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2
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2.2k
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Odd output from FastQC
RNA-Seq fastqc
7.8 years ago by Charles Murtaugh ▴ 50
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0
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2.2k
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Comment: A: Odd output from FastQC
7.8 years ago by Charles Murtaugh ▴ 50
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