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Answer: Answer: filter reads with >90% match
3 months ago by Pierre Lindenbaum 161k
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944
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Answer: Answer: How to save the results of norm to txt
3 months ago by Pierre Lindenbaum 161k
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934
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Answer: Answer: nfcore/fetchngs : Error: fasterq-dump cannot create this file
3 months ago by Pierre Lindenbaum 161k
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Answer: Answer: Importing read pairs from BAM with specific R1 and R2 start/end positions for pa
3 months ago by Pierre Lindenbaum 161k
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525
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Answer: Answer: How can we explain a lower reference allele frequency than alternative allele in
3 months ago by Pierre Lindenbaum 161k
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588
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Answer: Answer: split sequences into their codons in a table
3 months ago by Pierre Lindenbaum 161k
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544
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Answer: Answer: Find reference fasta based on M5/MD5 string
3 months ago by Pierre Lindenbaum 161k
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562
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Answer: Answer: How to run BRIG on Ubuntu 22?
4 months ago by Pierre Lindenbaum 161k
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304
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Answer: Answer: Is there a way to map Medgen # to OMIM # programmatically?
4 months ago by Pierre Lindenbaum 161k
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886
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Answer: Answer: how to copy and rename files in nextflow
4 months ago by Pierre Lindenbaum 161k
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466
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Answer: Answer: How to launch MAUVE on Ubuntu 22?
4 months ago by Pierre Lindenbaum 161k
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618
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Answer: Answer: Help with vcf annotation
4 months ago by Pierre Lindenbaum 161k
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323
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Answer: Answer: Efficiently Adding Missing 0/0 Sites to VCF from Whole-Genome Sequencing
4 months ago by Pierre Lindenbaum 161k
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1.4k
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Answer: Answer: BedGraph file
4 months ago by Pierre Lindenbaum 161k
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1.9k
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Answer: Answer: Can anyone simplify GATK installation
4 months ago by Pierre Lindenbaum 161k
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449
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Answer: Answer: Remove duplicate lines in a vcf file
updated 4 months ago by 142k • written 4 months ago by 161k
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763
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Answer: Answer: "C++ compiler cannot create executables", while installing ABySS 2.0 assembler
4 months ago by Pierre Lindenbaum 161k
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695
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Answer: Answer: pVCF versus gVCF
4 months ago by Pierre Lindenbaum 161k
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Answer: Answer: Can I remove all variants in a vcf file that have 0/0 for PRS calculation?
4 months ago by Pierre Lindenbaum 161k
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1.0k
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Answer: Answer: Where can I find a vcf file with individuals in it, that have a specific disease
4 months ago by Pierre Lindenbaum 161k
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997
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Answer: Answer: Error getting the genome on clinvaR
4 months ago by Pierre Lindenbaum 161k
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515
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Answer: Answer: Should I re-index a bam after editing the read groups in the bam header?
4 months ago by Pierre Lindenbaum 161k
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745
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Answer: Answer: CRAM file version
4 months ago by Pierre Lindenbaum 161k
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419
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Answer: Answer: Annotate BED file
4 months ago by Pierre Lindenbaum 161k
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1.2k
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Answer: Answer: How to compare multiple bed files with a collection of these bed files one by on
updated 4 months ago by 43k • written 4 months ago by 161k
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815
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Answer: Answer: Diagram tool
4 months ago by Pierre Lindenbaum 161k
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603
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Answer: Answer: Importing modules based on python in bash script wont work
4 months ago by Pierre Lindenbaum 161k
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502
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Answer: Answer: extract variants from 1000 Genome VCF files
5 months ago by Pierre Lindenbaum 161k
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463
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Answer: Answer: How to subtract variants from one VCF file to another?
5 months ago by Pierre Lindenbaum 161k
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649
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Answer: Answer: gatk SelectVariants is giving duplicate allele error while extracting SNPs out o
updated 5 months ago by 43k • written 5 months ago by 161k
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1.8k
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Answer: Answer: How to query 1000 genomes project VCF files for specific regions without downloa
5 months ago by Pierre Lindenbaum 161k
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500
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Answer: Answer: Issues with Chromosome Encoding and VCF Annotation in dbSNP Alpha Release
5 months ago by Pierre Lindenbaum 161k
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1.5k
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Answer: Answer: Extracting only soft/hard clipped reads from a bam file
5 months ago by Pierre Lindenbaum 161k
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421
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Answer: Answer: Moving AF tag to new column in a VCF file
5 months ago by Pierre Lindenbaum 161k
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341
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Answer: Answer: Bedtools intersection
5 months ago by Pierre Lindenbaum 161k
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657
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Answer: Answer: subset a bam file
5 months ago by Pierre Lindenbaum 161k
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660
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Answer: Answer: Human mitochondrial reference genome
5 months ago by Pierre Lindenbaum 161k
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1.0k
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Answer: Answer: How to filter .fasta file based on conditional statement
5 months ago by Pierre Lindenbaum 161k
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479
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Answer: Answer: BBDuk error: with these 4 lines....
5 months ago by Pierre Lindenbaum 161k
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572
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Answer: Answer: snp database using annotation
5 months ago by Pierre Lindenbaum 161k
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376
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Answer: Answer: update FMT/GT in VCF file using bcftools annotate
5 months ago by Pierre Lindenbaum 161k
2
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819
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Answer: Answer: How to overlap patient VCF with ClinVar database annotation using bedtools?
5 months ago by Pierre Lindenbaum 161k
2
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2
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466
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Answer: Answer: Circos karyotype file
5 months ago by Pierre Lindenbaum 161k
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266
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Answer: Answer: Is there a way to query Ensembl to get all 3'UTRs from all species?
5 months ago by Pierre Lindenbaum 161k
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346
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Answer: Answer: bcftools info and filter error
5 months ago by Pierre Lindenbaum 161k
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1.2k
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Answer: Answer: How to download FASTQ files from the European Nucleotide Archive (ENA) to use th
6 months ago by Pierre Lindenbaum 161k
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526
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Answer: Answer: Compare two VCF / BAM / FASTQ files for degree of relativity
6 months ago by Pierre Lindenbaum 161k
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2
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751
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Answer: Answer: Cut fastq files
6 months ago by Pierre Lindenbaum 161k
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445
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Answer: Answer: set GT values to missing in VCF file for specific sample-variant combinations -
6 months ago by Pierre Lindenbaum 161k
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621
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Answer: Answer: [main_samview] fail to read the header from "human_g1k_v37.annotate.fasta".
6 months ago by Pierre Lindenbaum 161k
4,703 results • Page 3 of 95
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