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Answer: Answer: Downloading viral database
3.0 years ago by vkkodali_ncbi ★ 3.7k
2
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0
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1.1k
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Answer: Answer: bedtools getfasta command
3.1 years ago by vkkodali_ncbi ★ 3.7k
5
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2
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2.2k
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Answer: Answer: Choosing a single consensus promoter/transcript for each gene (Mouse)
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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2.3k
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Answer: Answer: How to download entire human protein sequences from RefSeq database hrough comma
3.1 years ago by vkkodali_ncbi ★ 3.7k
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0
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5.7k
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Answer: Answer: Translating gene names to entrez id's
3.1 years ago by vkkodali_ncbi ★ 3.7k
2
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2
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1.6k
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Answer: A: Command line Taxa search within SRA / NCBI Trace
3.1 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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811
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Answer: A: Finding gene of interest in data downloaded from SRA
3.2 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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4.0k
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Answer: A: Batch download genome feature file by RefSeq
3.2 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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804
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Answer: A: Extract CDS product from Genbank file with coordinate range
3.2 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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1.7k
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Answer: C: Stringtie transcripts to Gene Name
3.3 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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822
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Answer: A: NCBI Genome Workbench tool
3.3 years ago by vkkodali_ncbi ★ 3.7k
3
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0
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3.1k
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Answer: A: downloading full genbank file using Entrez efetch
3.4 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.0k
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Answer: A: Get corresponding Biosample accessions for very large list of SRA accesions?
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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910
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Answer: C: What kinds of gene ID types like below??
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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2.4k
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Answer: A: Is there any tool/API available to convert GTF/GFF to JSON format?
3.4 years ago by vkkodali_ncbi ★ 3.7k
2
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0
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4.1k
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Answer: A: Easiest way to homogenize gene aliases across datasets?
updated 3.4 years ago by 35k • written 3.4 years ago by ★ 3.7k
1
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2
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3.7k
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Answer: A: converting RefSeq Protein (NCBI) accession numbers to Gene Symbol
3.4 years ago by vkkodali_ncbi ★ 3.7k
2
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1
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4.0k
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Answer: A: Conversion of gene id to Refseq/gene symbol
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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3.1k
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Answer: A: how to batch download SARS-CoV-2 sequences data from NCBI?
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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1.9k
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Answer: A: Best way to get gene IDs for Salmon transcript output
3.4 years ago by vkkodali_ncbi ★ 3.7k
2
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1
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1.4k
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Answer: A: Use BioMart to get gene names for transcripts with isoform ID (e.g. NM_000014.6)
3.4 years ago by vkkodali_ncbi ★ 3.7k
11
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2
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14k
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Answer: A: How to download genome assemblies from NCBI with a list of GCA identifiers?
3.4 years ago by vkkodali_ncbi ★ 3.7k
3
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2
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1.2k
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Answer: A: Sequence Retrieval of SARS-CoV Complete Genomes
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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2.1k
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Answer: C: Getting a gff file from NCBI
3.5 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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1.8k
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Answer: A: How to download all Pseudomonas aeruginosa Genomes from NCBI Genomes database?
updated 3.5 years ago by 141k • written 3.5 years ago by ★ 3.7k
3
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1
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2.6k
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Answer: C: BAM to FASTQ discards most reads as singletons though flagstat says otherwise
3.7 years ago by vkkodali_ncbi ★ 3.7k
3
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0
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942
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Answer: A: Unkown NCBI genome chromosomes
3.7 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
1.0k
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Answer: A: Create a database of RefSeq genes
3.7 years ago by vkkodali_ncbi ★ 3.7k
2
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2
replies
4.5k
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Answer: Answer: Gene starts with "LOC" prefix ?
3.8 years ago by vkkodali_ncbi ★ 3.7k
4
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1
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2.9k
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Answer: A: How to pull metadata from SRA based on BioSample ID
3.8 years ago by vkkodali_ncbi ★ 3.7k
3
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0
replies
934
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Answer: A: How do I get the refseq IDs from a list of gene IDs
4.0 years ago by vkkodali_ncbi ★ 3.7k
1
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3
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1.5k
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Answer: A: Bioinformatics: Converting EntrezGeneID to FASTA entry for BLAST alignment
4.0 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.5k
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Answer: A: Why is the hg38 exome so much bigger than hg19?
4.0 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.6k
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Answer: A: how I can download 2,333 genomes from the NCBI database ?
4.0 years ago by vkkodali_ncbi ★ 3.7k
3
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0
replies
2.2k
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Answer: A: Finding the Refseq Soft-masked Regions
4.0 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
2.1k
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Answer: A: CpG islands for ARS-UCD1.2 Bos taurus genome?
4.1 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.3k
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Answer: A: How reliable are the ensembl transcript isoforms?
4.1 years ago by vkkodali_ncbi ★ 3.7k
2
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0
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5.7k
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Answer: C: Modify chromosome name in fasta file
4.1 years ago by vkkodali_ncbi ★ 3.7k
2
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0
replies
1.8k
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Answer: A: From a list of RefSeq protein IDs to assembly accessions
4.1 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.4k
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Answer: A: Extract protein files from nucleotide accession numbers
4.1 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.3k
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Answer: A: Fetching a representative genome, gene and protein IDs from NCBI using a list o
4.1 years ago by vkkodali_ncbi ★ 3.7k
2
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1
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1.3k
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Answer: A: esearch command-line tool only returns summary of hits?
4.1 years ago by vkkodali_ncbi ★ 3.7k
0
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0
replies
1.2k
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Answer: A: Uncommon wget behavior with ncbi genomes
4.1 years ago by vkkodali_ncbi ★ 3.7k
1
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0
replies
754
views
Answer: A: Detect leaderless proteins from a genes/proteins list
4.1 years ago by vkkodali_ncbi ★ 3.7k
2
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2
replies
1.7k
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Answer: A: how to find the kingdom for a taxon id using the terminal?
4.1 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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1.3k
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Answer: A: Refseq sequences gene position extraction
4.2 years ago by vkkodali_ncbi ★ 3.7k
1
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0
replies
8.4k
views
Answer: A: Naming Chromosomes: From Ncbi Nc_0000Abc To Ucsc Chrabc
4.2 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.6k
views
Answer: A: Using Entrez to find the taxonomy for an accession number
4.2 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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1.6k
views
Answer: C: How to download from ncbi not a whole FASTA file, but only a certain interval?
4.2 years ago by vkkodali_ncbi ★ 3.7k
1
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0
replies
2.7k
views
Answer: A: Fetching Genbank Assembly IDs with protein
4.2 years ago by vkkodali_ncbi ★ 3.7k
181 results • Page 2 of 4
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