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810
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Answer: A: Extract CDS product from Genbank file with coordinate range
3.2 years ago by vkkodali_ncbi ★ 3.7k
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0
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1.6k
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Comment: C: Convert transcript coordinates to genomic coordinates
3.2 years ago by vkkodali_ncbi ★ 3.7k
3
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4
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1.6k
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Convert transcript coordinates to genomic coordinates
alignment
3.2 years ago by vkkodali_ncbi ★ 3.7k
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0
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1.6k
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Comment: C: Convert transcript coordinates to genomic coordinates
3.2 years ago by vkkodali_ncbi ★ 3.7k
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0
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980
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Comment: C: Server to host bam files
3.2 years ago by vkkodali_ncbi ★ 3.7k
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0
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980
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Comment: C: Server to host bam files
3.2 years ago by vkkodali_ncbi ★ 3.7k
0
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4
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980
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Server to host bam files
RNA-Seq alignment bam
3.2 years ago by vkkodali_ncbi ★ 3.7k
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1
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1.7k
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Answer: C: Stringtie transcripts to Gene Name
3.3 years ago by vkkodali_ncbi ★ 3.7k
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1
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1.7k
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Comment: C: Stringtie transcripts to Gene Name
3.3 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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825
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Answer: A: NCBI Genome Workbench tool
3.3 years ago by vkkodali_ncbi ★ 3.7k
3
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0
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3.1k
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Answer: A: downloading full genbank file using Entrez efetch
3.4 years ago by vkkodali_ncbi ★ 3.7k
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0
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1.0k
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Answer: A: Get corresponding Biosample accessions for very large list of SRA accesions?
3.4 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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915
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Comment: C: What kinds of gene ID types like below??
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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915
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Answer: C: What kinds of gene ID types like below??
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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2.4k
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Answer: A: Is there any tool/API available to convert GTF/GFF to JSON format?
3.4 years ago by vkkodali_ncbi ★ 3.7k
2
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0
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4.1k
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Answer: A: Easiest way to homogenize gene aliases across datasets?
updated 3.4 years ago by 35k • written 3.4 years ago by ★ 3.7k
1
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0
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3.8k
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Comment: C: converting RefSeq Protein (NCBI) accession numbers to Gene Symbol
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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2
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3.8k
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Answer: A: converting RefSeq Protein (NCBI) accession numbers to Gene Symbol
3.4 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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4.1k
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Comment: C: Easiest way to homogenize gene aliases across datasets?
3.4 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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4.0k
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Comment: C: Conversion of gene id to Refseq/gene symbol
3.4 years ago by vkkodali_ncbi ★ 3.7k
2
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1
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4.0k
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Answer: A: Conversion of gene id to Refseq/gene symbol
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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1
reply
3.1k
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Answer: A: how to batch download SARS-CoV-2 sequences data from NCBI?
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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1.9k
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Answer: A: Best way to get gene IDs for Salmon transcript output
3.4 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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1.4k
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Comment: C: Use BioMart to get gene names for transcripts with isoform ID (e.g. NM_000014.6)
3.4 years ago by vkkodali_ncbi ★ 3.7k
2
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1
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1.4k
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Answer: A: Use BioMart to get gene names for transcripts with isoform ID (e.g. NM_000014.6)
3.4 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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846
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Comment: C: NCBI gtf contains same trasncript id for some trasncripts and giving trouble on
3.4 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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696
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Comment: C: Mapping Grch38 Genomic DNA Positions to RefSeq transcripts
3.4 years ago by vkkodali_ncbi ★ 3.7k
11
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2
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14k
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Answer: A: How to download genome assemblies from NCBI with a list of GCA identifiers?
3.4 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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14k
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Comment: C: How to download genome assemblies from NCBI with a list of GCA identifiers?
3.4 years ago by vkkodali_ncbi ★ 3.7k
2
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0
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1.1k
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Comment: C: How to get summary for acc.no. not starting with 'WP_' ?
3.5 years ago by vkkodali_ncbi ★ 3.7k
3
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2
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1.2k
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Answer: A: Sequence Retrieval of SARS-CoV Complete Genomes
3.5 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.2k
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Comment: C: Sequence Retrieval of SARS-CoV Complete Genomes
3.5 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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2.1k
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Answer: C: Getting a gff file from NCBI
3.5 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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2.1k
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Comment: C: Getting a gff file from NCBI
3.5 years ago by vkkodali_ncbi ★ 3.7k
1
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2
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2.3k
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Comment: C: Elink to get PMID associated with a BioProject or SRA entry
3.5 years ago by vkkodali_ncbi ★ 3.7k
0
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2
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2.3k
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Comment: C: Elink to get PMID associated with a BioProject or SRA entry
3.5 years ago by vkkodali_ncbi ★ 3.7k
1
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1
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1.8k
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Answer: A: How to download all Pseudomonas aeruginosa Genomes from NCBI Genomes database?
updated 3.5 years ago by 142k • written 3.5 years ago by ★ 3.7k
0
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2
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3.8k
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Comment: C: Batch Entrez outputs nothing
3.6 years ago by vkkodali_ncbi ★ 3.7k
1
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0
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4.8k
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Comment: C: How to retrieve sets of protein sequences?
3.6 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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4.8k
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Comment: C: How to retrieve sets of protein sequences?
3.6 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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2.6k
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Comment: C: BAM to FASTQ discards most reads as singletons though flagstat says otherwise
3.7 years ago by vkkodali_ncbi ★ 3.7k
3
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1
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2.6k
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Answer: C: BAM to FASTQ discards most reads as singletons though flagstat says otherwise
3.7 years ago by vkkodali_ncbi ★ 3.7k
7
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5
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2.6k
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BAM to FASTQ discards most reads as singletons though flagstat says otherwise
samtools bam
3.7 years ago by vkkodali_ncbi ★ 3.7k
3
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0
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951
views
Answer: A: Unkown NCBI genome chromosomes
3.7 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.0k
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Answer: A: Create a database of RefSeq genes
3.7 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.2k
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Comment: C: Retrieve reference sequence GenBank for mRNA transcript of interest
3.8 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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1.1k
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Comment: C: Problem in subsetting a gtf based on ids in another file
3.8 years ago by vkkodali_ncbi ★ 3.7k
0
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0
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733
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Comment: C: About RefSeq Accession Number trasformation
3.8 years ago by vkkodali_ncbi ★ 3.7k
0
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1
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733
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Comment: C: About RefSeq Accession Number trasformation
3.8 years ago by vkkodali_ncbi ★ 3.7k
2
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2
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4.5k
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Answer: Answer: Gene starts with "LOC" prefix ?
3.8 years ago by vkkodali_ncbi ★ 3.7k
386 results • Page 3 of 8
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