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11
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23
replies
4.2k
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How to tell if a gene is over- or under-expressed from the output of F test (differential gene expression)?
f test gene R linear regression
updated 7.8 years ago by 104k • written 7.8 years ago by ▴ 110
0
votes
0
replies
1.8k
views
RNA Seq version of GEO data sets?
geo RNA-Seq gene expression
7.8 years ago by StephanieK ▴ 110
1
vote
1
reply
2.7k
views
How to extract information about normalisation method (e.g. RMA, MAS5) from GEO Soft File?
geo R soft rma mas5
updated 7.8 years ago by 5.8k • written 7.8 years ago by ▴ 110
0
votes
1
reply
2.0k
views
How can I combine GDSeSet with limma to identify differentially expressed genes?
limma gdseset gds r affy
7.8 years ago by StephanieK ▴ 110
1
vote
2
replies
3.7k
views
Reading in plain text gene expression and phenotypic data files to limma
limma r affy gene expression differential
updated 7.8 years ago by ★ 2.0k • written 7.8 years ago by ▴ 110
5
votes
8
replies
5.9k
views
Best software for differential gene expression analysis?
expression edge limma R gene
updated 7.9 years ago by ★ 1.5k • written 7.9 years ago by ▴ 110
18
votes
5
replies
6.6k
views
using R aggregate command/combining affy probes into gene IDs
affy aggregate r expression probe
updated 9 weeks ago by • 0 • written 7.9 years ago by ▴ 110
3
votes
4
replies
5.0k
views
How to identify whether a microarray data set is single channel intensity?
microarray affymetrix illumina genechip expression
updated 7.9 years ago by 5.8k • written 7.9 years ago by ▴ 110
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