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1.6k
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Comment:
Comment: STAR error EXITING because of FATAL ERROR: failed reading from temporary file
3 months ago by
FatihSarigol
▴ 260
0
votes
0
replies
7.6k
views
Comment:
Comment: clusterprofiler: How to extract genes of a specific GO-term/pathway
17 months ago by
FatihSarigol
▴ 260
0
votes
0
replies
2.5k
views
Answer:
Answer: How to change the default P value and FDR cutoff in DiffBind
2.8 years ago by
FatihSarigol
▴ 260
1
vote
1
reply
6.2k
views
Answer:
Answer: Software recommendations for synteny analysis
3.2 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
19k
views
Comment:
Comment: gff3 to CDS fasta
3.4 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
19k
views
Answer:
Answer: gff3 to CDS fasta
3.4 years ago by
FatihSarigol
▴ 260
1
vote
1
reply
52k
views
Comment:
C: How do you cite a tool that doesn't have a publication?
4.2 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
62k
views
Answer:
Answer: Tool to generate proportional Venn Diagrams?
updated 2.6 years ago by
Ram
44k • written 4.4 years ago by
FatihSarigol
▴ 260
1
vote
1
reply
1.4k
views
Comment:
C: How to identify the bp distance of blast results to closest genes in a genome
4.4 years ago by
FatihSarigol
▴ 260
7
votes
4
replies
1.4k
views
How to identify the bp distance of blast results to closest genes in a genome
blast
genome
sequence
4.4 years ago by
FatihSarigol
▴ 260
9
votes
0
replies
307k
views
Answer:
A: Understanding up and down regulated genes from LOG2 foldchange or foldchange
updated 4.9 years ago by
Ram
44k • written 7.5 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
8.0k
views
Comment:
C: vcftools Warning: Expected at least 2 parts in FORMAT entry
5.5 years ago by
FatihSarigol
▴ 260
0
votes
1
reply
8.0k
views
Comment:
C: vcftools Warning: Expected at least 2 parts in FORMAT entry
5.5 years ago by
FatihSarigol
▴ 260
4
votes
6
replies
2.1k
views
Split fai (fasta index) or VCF into N nearly equal total length chunks
genome
faidx
5.7 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
2.1k
views
Answer:
A: Split fai (fasta index) or VCF into N nearly equal total length chunks
5.7 years ago by
FatihSarigol
▴ 260
0
votes
1
reply
2.1k
views
Comment:
C: Split fai (fasta index) or VCF into N nearly equal total length chunks
5.7 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
2.1k
views
Comment:
C: Split fai (fasta index) or VCF into N nearly equal total length chunks
5.7 years ago by
FatihSarigol
▴ 260
1
vote
0
replies
59k
views
Comment:
C: How to extract specific chromosome from vcf file
5.7 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
3.1k
views
Comment:
C: Convert from PSL to MAF
5.8 years ago by
FatihSarigol
▴ 260
1
vote
0
replies
12k
views
Answer:
A: Mismatch and Indel statistics from BAM/SAM file
6.0 years ago by
FatihSarigol
▴ 260
0
votes
1
reply
9.3k
views
Comment:
C: Substituting Snps On Reference Genome Assemblies
6.4 years ago by
FatihSarigol
▴ 260
1
vote
1
reply
2.3k
views
Comment:
C: Samtools faidx non-zero exit status 217
6.6 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
16k
views
Comment:
C: Extracting allel, Genotype from VCF file
6.6 years ago by
FatihSarigol
▴ 260
1
vote
0
replies
1.2k
views
Comment:
C: any tool to join reads regardless of overlap?
6.6 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
6.3k
views
Comment:
C: BWA MEM -T option. What does really do and how?
6.7 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
35k
views
Comment:
C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files. And remov
6.7 years ago by
FatihSarigol
▴ 260
1
vote
0
replies
6.2k
views
Comment:
C: LOSITAN - illegal URL redirect
6.7 years ago by
FatihSarigol
▴ 260
3
votes
0
replies
2.9k
views
Answer:
A: How does FASTQ format show a diploid sequence.
6.7 years ago by
FatihSarigol
▴ 260
1
vote
1
reply
6.2k
views
Comment:
C: LOSITAN - illegal URL redirect
6.8 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
1.6k
views
Comment:
C: Problem launching LOSITAN
6.8 years ago by
FatihSarigol
▴ 260
0
votes
1
reply
9.3k
views
Answer:
A: Substituting Snps On Reference Genome Assemblies
6.8 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
37k
views
Answer:
A: New Fasta Sequence From Reference Fasta And Variant Calls File?
6.8 years ago by
FatihSarigol
▴ 260
3
votes
1
reply
1.4k
views
Fetch Phenotypes from Orthologues and GO terms for a NonModel organism Gene Set
ensembl
biomart
gene ontology
updated 7.2 years ago by
Emily
24k • written 7.2 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
3.1k
views
Comment:
C: problems to install Lositan with Java because it is signed using MD5
7.3 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
31k
views
Answer:
A: Merge Paired-End Reads
7.3 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
9.3k
views
Comment:
C: Substituting Snps On Reference Genome Assemblies
7.3 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
9.3k
views
Comment:
C: Substituting Snps On Reference Genome Assemblies
7.3 years ago by
FatihSarigol
▴ 260
1
vote
1
reply
1.4k
views
Subselecting populations make Lositan freeze
lositan
7.3 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
1.8k
views
Comment:
C: Lositan freezing after starting the analysis
7.3 years ago by
FatihSarigol
▴ 260
3
votes
0
replies
11k
views
Answer:
A: Kallisto New RNA-seq quantification method discussion
7.5 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
37k
views
Comment:
C: New Fasta Sequence From Reference Fasta And Variant Calls File?
7.5 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
6.4k
views
Comment:
C: nucleotide divergency (--site-pi) in VCF tools
7.7 years ago by
FatihSarigol
▴ 260
1
vote
1
reply
46k
views
Answer:
A: How to filter vcf file on minimum genotype depth and quality for each sample
7.8 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
3.3k
views
Comment:
C: Converting Cdd Pssm Ids To Pdb Or Interpro Id
7.8 years ago by
FatihSarigol
▴ 260
1
vote
2
replies
2.5k
views
Aligning Reads with Overhangs on the Ends (Edges) of Reference Contigs or Scaffolds
alignment
SNP
non-model
mismatch
Assembly
updated 8.0 years ago by
Biostar
20 • written 8.0 years ago by
FatihSarigol
▴ 260
0
votes
0
replies
2.5k
views
Comment:
C: Aligning Reads with Overhangs on the Ends (Edges) of Reference Contigs or Scaffo
8.0 years ago by
FatihSarigol
▴ 260
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