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66
votes
15
replies
31k
views
14 follow
Rna-Seq Pipeline
pipeline next-gen-sequencing rna rna-seq
updated 11 days ago by 39k • written 13.0 years ago by 24k
328
votes
54
replies
58k
views
45 follow
What Tools/Libraries Do You Use To Visualize Genomic Feature Data?
genome visualization
updated 8 months ago by 85k • written 13.2 years ago by 24k
7
votes
2
replies
1.4k
views
How to run vg giraffe for sv genotyping?
vg
updated 22 months ago by ▴ 300 • written 22 months ago by 24k
102
votes
44
replies
7.9k
views
22 follow
What Are Numbers Every Bioinformatician Should Know?
knowledge career
updated 3 months ago by 39k • written 9.8 years ago by 24k
3
votes
2
replies
13k
views
Comment: C: Samtools Filter Reads Cigar Field
updated 2.5 years ago by 39k • written 9.8 years ago by 24k
3
votes
0
replies
9.5k
views
Answer: C: Changing Chromosome Notation On Vcf
updated 2.8 years ago by 11k • written 9.6 years ago by 24k
6
votes
1
reply
49k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 3.0 years ago by 39k • written 11.1 years ago by 24k
9
votes
1
reply
49k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 3.0 years ago by 39k • written 11.1 years ago by 24k
6
votes
0
replies
49k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 3.0 years ago by 39k • written 11.0 years ago by 24k
77
votes
1
reply
49k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 3.0 years ago by 39k • written 12.2 years ago by 24k
13
votes
0
replies
49k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 3.0 years ago by 39k • written 12.2 years ago by 24k
4
votes
1
reply
137k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 3.2 years ago by 39k • written 8.8 years ago by 24k
0
votes
0
replies
6.0k
views
Comment: C: RNA-seq analysis for Ion Proton Transcriptome data - tophat2 error
updated 3.4 years ago by 39k • written 9.0 years ago by 24k
1
vote
1
reply
3.0k
views
Answer: A: Adjusting for Age in GWAS where case and control are not age matched.
updated 3.4 years ago by 39k • written 9.0 years ago by 24k
4
votes
0
replies
1.7k
views
Answer: A: Rearrange a table
updated 3.4 years ago by 39k • written 9.0 years ago by 24k
0
votes
0
replies
2.2k
views
Answer: A: csfasta malformed qualities
updated 3.4 years ago by 39k • written 9.0 years ago by 24k
9
votes
2
replies
9.6k
views
Answer: A: Bwa-Meth: Align And Tabulate Bs-Seq Reads
updated 3.4 years ago by 39k • written 9.0 years ago by 24k
1
vote
0
replies
4.1k
views
Answer: A: Fast search for many patterns
updated 3.4 years ago by 39k • written 9.0 years ago by 24k
4
votes
0
replies
5.0k
views
Answer: A: EMBOSS Needle: Read sequences from stdin
updated 3.4 years ago by 39k • written 9.0 years ago by 24k
3
votes
1
reply
2.0k
views
Answer: C: equivalent of bash eval in R
updated 3.4 years ago by 39k • written 9.1 years ago by 24k
4
votes
2
replies
4.8k
views
Answer: A: Which tool to use to run a PCA on a microarray dataset to select the most releva
updated 3.4 years ago by 39k • written 9.1 years ago by 24k
1
vote
1
reply
6.5k
views
Answer: A: How To Calculate Power For Genome Wide Methylation Array Data, Like Illumina 27K
updated 3.4 years ago by 39k • written 9.6 years ago by 24k
3
votes
0
replies
5.9k
views
Comment: C: Transcription Factors <--> Regulated Genes Database
updated 3.4 years ago by 39k • written 9.7 years ago by 24k
4
votes
2
replies
5.9k
views
Answer: A: Interleaving Records From More Than One Fasta File
updated 3.4 years ago by 39k • written 10.2 years ago by 24k
2
votes
1
reply
3.6k
views
Answer: A: Is There A Rare Variant Burden Test That Corrects For Gene Length?
updated 3.4 years ago by 39k • written 10.2 years ago by 24k
0
votes
0
replies
8.2k
views
Comment: C: Python: Finding Gene Closest To A Given Location
updated 3.5 years ago by 39k • written 10.5 years ago by 24k
3
votes
1
reply
8.2k
views
Answer: A: Python: Finding Gene Closest To A Given Location
updated 3.5 years ago by 39k • written 10.6 years ago by 24k
0
votes
0
replies
6.0k
views
Comment: C: How To Obtain Intron And Utr Info From Gff File?
updated 3.5 years ago by 39k • written 11.5 years ago by 24k
0
votes
0
replies
21k
views
Comment: C: Bed File With Introns Only
updated 3.5 years ago by 39k • written 11.6 years ago by 24k
0
votes
0
replies
1.7k
views
Comment: C: Intersection Of Processed Microarray Data: P-Values Commensurability
updated 3.5 years ago by 39k • written 11.7 years ago by 24k
7
votes
5
replies
11k
views
Answer: A: Get Snp Position From A Python Interface.
updated 3.5 years ago by 39k • written 10.5 years ago by 24k
1
vote
0
replies
14k
views
Comment: C: Chromosome Plot In R
updated 3.5 years ago by 39k • written 11.8 years ago by 24k
1
vote
4
replies
19k
views
Answer: A: Probability Of Gene List Overlap
updated 3.5 years ago by 39k • written 11.4 years ago by 24k
6
votes
0
replies
3.5k
views
Answer: A: Bed Files Comparison
updated 3.5 years ago by 39k • written 11.8 years ago by 24k
1
vote
2
replies
6.2k
views
Comment: C: Pat Schloss of Mothur uses this
updated 3.5 years ago by 39k • written 8.6 years ago by 24k
0
votes
0
replies
6.8k
views
Comment: C: virtualenv - running Python based software in isolation
updated 3.5 years ago by 39k • written 8.8 years ago by 24k
2
votes
0
replies
3.5k
views
Comment: C: How can I learn cluster computing?
updated 3.6 years ago by 39k • written 8.5 years ago by 24k
3
votes
1
reply
2.8k
views
Answer: Answer: What bioinformatics tools/software do not get enough recognition?
updated 16 months ago by 39k • written 8.6 years ago by 24k
36
votes
1
reply
51k
views
Answer: Answer: Difference between Hard Clip and Soft Clip in Samtools CIGAR string
updated 17 months ago by 39k • written 8.8 years ago by 24k
2
votes
0
replies
3.6k
views
Answer: A: Co-occurring TF motifs in peak file from ChIP-seq experiment
updated 3.6 years ago by 39k • written 8.8 years ago by 24k
5
votes
1
reply
9.2k
views
Answer: A: Mm9 Vs Mm10 [Why Is The Information Less In New Genome Build]
updated 3.6 years ago by 39k • written 10.8 years ago by 24k
1
vote
0
replies
11k
views
Comment: C: How To Read A Bigwig File Using Python
updated 3.6 years ago by 39k • written 11.2 years ago by 24k
0
votes
0
replies
8.4k
views
Comment: C: What Does Bwa'S '-N' Parameter Mean?
updated 3.7 years ago by 39k • written 11.4 years ago by 24k
0
votes
0
replies
15k
views
Comment: C: Wiggle File 2 Bed File
updated 3.7 years ago by 39k • written 11.4 years ago by 24k
1
vote
0
replies
9.3k
views
Comment: C: Cutadapt Or Fastx Clipper
updated 3.7 years ago by 39k • written 11.6 years ago by 24k
0
votes
0
replies
6.8k
views
Comment: C: What Depth Of Coverage For Whole Genome Snp Calling?
updated 3.7 years ago by 39k • written 11.7 years ago by 24k
3
votes
0
replies
3.8k
views
Comment: C: Does Pre-Publishing Open Source Algorithms Hurt Chances Of Getting Published?
updated 3.7 years ago by 39k • written 11.7 years ago by 24k
12
votes
10
replies
13k
views
Answer: A: Statistical Measure Of Biological Significance For Overlapping Genomic Regions
updated 3.7 years ago by 39k • written 12.0 years ago by 24k
0
votes
0
replies
2.5k
views
Comment: C: Exon-Start Same As Exon-End From Ucsc Knowngene
updated 3.7 years ago by 39k • written 12.0 years ago by 24k
0
votes
0
replies
9.0k
views
Comment: C: Position Weight Matrix From Sequence Alignment
updated 3.7 years ago by 39k • written 12.1 years ago by 24k
916 results • Page 1 of 19
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