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27k
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Comment: C: Ngs - Huge (Fastq) File Parsing - Which Language For Good Efficiency ?
9.7 years ago by brentp 24k
0
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2
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6.8k
views
Comment: Comment: Why is academic software hard to install?
updated 2.4 years ago by 44k • written 9.7 years ago by 24k
0
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1
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3.4k
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Comment: Comment: How does samblaster use library tag information if at all?
updated 2.4 years ago by 44k • written 9.7 years ago by 24k
0
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1
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6.8k
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Comment: C: Why is academic software hard to install?
9.7 years ago by brentp 24k
1
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2
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6.8k
views
Comment: C: Why is academic software hard to install?
9.7 years ago by brentp 24k
0
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0
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2.8k
views
Comment: Comment: metaflagstat.py - painless bam/sam read flag counting
updated 3.2 years ago by 44k • written 9.7 years ago by 24k
1
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0
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5.7k
views
Comment: C: Limma calls all genes as differentially expressed - what am I doing wrong?
9.7 years ago by brentp 24k
3
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1
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5.7k
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Answer: C: Limma calls all genes as differentially expressed - what am I doing wrong?
9.7 years ago by brentp 24k
6
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2
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2.6k
views
Genome-Wide Model Selection And Interactions Terms
model expression
updated 9.8 years ago by 20 • written 12.2 years ago by 24k
0
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1
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5.5k
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Comment: C: A Practical (And Opinionated) Guide To Analyzing Human Methylation 450K Data
9.8 years ago by brentp 24k
23
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8
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5.5k
views
Tutorial: A Practical (And Opinionated) Guide To Analyzing Human Methylation 450K Data
450K methylation
updated 2.5 years ago by 44k • written 9.8 years ago by 24k
0
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1
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5.5k
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Comment: C: A Practical (And Opinionated) Guide To Analyzing Human Methylation 450K Data
9.8 years ago by brentp 24k
0
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0
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5.5k
views
Comment: Comment: A Practical (And Opinionated) Guide To Analyzing Human Methylation 450K Data
updated 2.5 years ago by 44k • written 9.8 years ago by 24k
4
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1
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2.9k
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Answer: Answer: Making use of phased haplotypes in rare variant burden testing
updated 2.5 years ago by 44k • written 9.8 years ago by 24k
1
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1
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2.6k
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Comment: C: Efficient way to add annotation to a list of genome positions with python
9.8 years ago by brentp 24k
0
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1
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3.9k
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Comment: Comment: VCF format for phased data
updated 2.5 years ago by 44k • written 9.8 years ago by 24k
2
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1
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3.9k
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Answer: Answer: VCF format for phased data
updated 2.5 years ago by 44k • written 9.8 years ago by 24k
4
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0
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56k
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Comment: C: Difference between Hard Clip and Soft Clip in Samtools CIGAR string
9.8 years ago by brentp 24k
0
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0
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4.5k
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Comment: Comment: Limma Contrast Question
updated 2.5 years ago by 44k • written 9.8 years ago by 24k
1
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1
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7.9k
views
Comment: C: virtualenv - running Python based software in isolation
9.8 years ago by brentp 24k
22
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4
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8.7k
views
Tool: Very Bad Things
python text
updated 18 months ago by 44k • written 11.4 years ago by 24k
0
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0
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5.9k
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Comment: C: Free HiSeq X Ten human genome fastq test data
9.9 years ago by brentp 24k
1
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1
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4.4k
views
Answer: Answer: cn.mops for WES, what am I doing wrong?
updated 2.5 years ago by 44k • written 9.9 years ago by 24k
0
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1
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5.9k
views
Comment: Comment: Free HiSeq X Ten human genome fastq test data
updated 2.5 years ago by 44k • written 9.9 years ago by 24k
1
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0
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2.7k
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Comment: C: map methylome data with GKNO mosaik program
9.9 years ago by brentp 24k
2
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1
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2.7k
views
Comment: Comment: map methylome data with GKNO mosaik program
updated 2.5 years ago by 44k • written 9.9 years ago by 24k
0
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2
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5.7k
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Comment: Comment: Using while loop to go over all files in a folder
updated 2.6 years ago by 44k • written 9.9 years ago by 24k
1
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0
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10.0k
views
Answer: Answer: Cannot coerce class 'structure("IRanges", package = "IRanges")' into a data.fram
updated 2.6 years ago by 44k • written 9.9 years ago by 24k
0
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0
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6.8k
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Comment: C: Tool to unmark duplicates
9.9 years ago by brentp 24k
1
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1
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4.0k
views
Answer: Answer: VCF filtering with a maximum coverage threshold
updated 2.6 years ago by 44k • written 9.9 years ago by 24k
2
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1
reply
2.6k
views
Answer: Answer: Map ENCODE DNaseI footprints to putative TFs
updated 2.6 years ago by 44k • written 9.9 years ago by 24k
0
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1
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5.1k
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Comment: C: Co-expression analysis with paired samples
10.0 years ago by brentp 24k
1
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0
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4.3k
views
Comment: C: 1000 Genomes : The Initial Phase 3 variant list and phased genotypes.
10.0 years ago by brentp 24k
0
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0
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5.1k
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Comment: C: Co-expression analysis with paired samples
10.0 years ago by brentp 24k
0
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1
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2.9k
views
Comment: Comment: Odd Bug?: No transcripts.gtf from Cufflink output
updated 2.6 years ago by 44k • written 10.0 years ago by 24k
0
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0
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4.4k
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Comment: C: CAP3: A DNA Sequence Assembly Program
10.0 years ago by brentp 24k
0
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1
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2.8k
views
Comment: C: Every one of my illumina seqs have an 'N' at base 18 and 48, and -14 on the reve
10.0 years ago by brentp 24k
0
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0
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7.1k
views
Comment: C: How To Calculate Power For Genome Wide Methylation Array Data, Like Illumina 27K
10.0 years ago by brentp 24k
0
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1
reply
11k
views
Comment: C: Bwa-Meth: Align And Tabulate Bs-Seq Reads
10.1 years ago by brentp 24k
34
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9
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11k
views
7 follow
Tool: Bwa-Meth: Align And Tabulate Bs-Seq Reads
methylation
updated 11 months ago by 44k • written 10.3 years ago by 24k
0
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0
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11k
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Comment: C: Bwa-Meth: Align And Tabulate Bs-Seq Reads
10.1 years ago by brentp 24k
5
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0
replies
11k
views
Answer: A: Bwa-Meth: Align And Tabulate Bs-Seq Reads
updated 10.1 years ago by 101k • written 10.3 years ago by 24k
0
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0
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2.2k
views
Answer: Answer: Any Tool Which Remark The Boundries Like Regulatory, Intron And Exon In Gene Seq
updated 2.7 years ago by 44k • written 10.1 years ago by 24k
2
votes
0
replies
10k
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Comment: C: MiSeq: R1 vs. R2 reads show big quality difference - is that normal?
10.1 years ago by brentp 24k
1
vote
1
reply
10k
views
Comment: C: MiSeq: R1 vs. R2 reads show big quality difference - is that normal?
10.1 years ago by brentp 24k
0
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0
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10k
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Comment: C: MiSeq: R1 vs. R2 reads show big quality difference - is that normal?
10.1 years ago by brentp 24k
0
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0
replies
2.6k
views
Comment: C: Resort bam from another bam header
10.1 years ago by brentp 24k
0
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1
reply
2.6k
views
Comment: C: Resort bam from another bam header
10.1 years ago by brentp 24k
0
votes
1
reply
22k
views
Comment: C: Efficiently parsing and viewing a large fastq file
10.1 years ago by brentp 24k
0
votes
2
replies
22k
views
Comment: C: Efficiently parsing and viewing a large fastq file
10.1 years ago by brentp 24k
916 results • Page 5 of 19
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