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864
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Answer: Answer: DESeq2 design formula considerations
5 months ago by jkim ▴ 130
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0
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562
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Comment: Comment: Comparing two RNA-Seq datasets
6 months ago by jkim ▴ 130
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1
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562
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Answer: Answer: Comparing two RNA-Seq datasets
6 months ago by jkim ▴ 130
1
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1
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390
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Comment: Comment: DE analysis with multiple factors
6 months ago by jkim ▴ 130
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1
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688
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Comment: Comment: Snakemake + singularity fails to locate bwa index files.
6 months ago by jkim ▴ 130
0
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1
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688
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Comment: Comment: Snakemake + singularity fails to locate bwa index files.
6 months ago by jkim ▴ 130
3
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5
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688
views
Snakemake + singularity fails to locate bwa index files.
singularity snakemake bwa
updated 6 months ago by 21k • written 6 months ago by ▴ 130
0
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0
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589
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Comment: Comment: Read coverage shows a difference in IGV
7 months ago by jkim ▴ 130
0
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0
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589
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Comment: Comment: Read coverage shows a difference in IGV
7 months ago by jkim ▴ 130
0
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0
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589
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Comment: Comment: Read coverage shows a difference in IGV
7 months ago by jkim ▴ 130
0
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0
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589
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Comment: Comment: Read coverage shows a difference in IGV
7 months ago by jkim ▴ 130
3
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7
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589
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Read coverage shows a difference in IGV
coverage BAM
7 months ago by jkim ▴ 130
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0
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4.2k
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Comment: Comment: Is there a limit for SAMTOOLS tview option?
7 months ago by jkim ▴ 130
0
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0
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673
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Comment: Comment: Filter out reads with hidden tags in bam files
7 months ago by jkim ▴ 130
0
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0
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673
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Comment: Comment: Filter out reads with hidden tags in bam files
7 months ago by jkim ▴ 130
0
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0
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673
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Comment: Comment: Filter out reads with hidden tags in bam files
7 months ago by jkim ▴ 130
4
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7
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673
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Filter out reads with hidden tags in bam files
BAM samtools
7 months ago by jkim ▴ 130
0
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1
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673
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Answer: Answer: Filter out reads with hidden tags in bam files
7 months ago by jkim ▴ 130
0
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0
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594
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Answer: Answer: Counts from STAR with stranded protocol
10 months ago by jkim ▴ 130
0
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1
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827
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Comment: Comment: snakemake workflow
10 months ago by jkim ▴ 130
0
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0
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976
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Comment: Comment: Biopython first project help
12 months ago by jkim ▴ 130
0
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1
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976
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Comment: Comment: Biopython first project help
12 months ago by jkim ▴ 130
0
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1
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888
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Comment: Comment: BLASTn produces empty output + output is 'Killed'
13 months ago by jkim ▴ 130
1
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0
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875
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Comment: Comment: How to rename multiple files?
13 months ago by jkim ▴ 130
0
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0
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558
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Answer: Answer: Rename fasta file based on coordinates
14 months ago by jkim ▴ 130
0
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1
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540
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Comment: Comment: Sickle is giving empty trimmed file
14 months ago by jkim ▴ 130
0
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0
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1.6k
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Answer: Answer: Fastest way to parse through a fasta file in python
14 months ago by jkim ▴ 130
2
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0
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1.9k
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Answer: Answer: How to convert FASTQ to FASTA
14 months ago by jkim ▴ 130
2
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0
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605
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Answer: Answer: Basename the contents of a file
15 months ago by jkim ▴ 130
0
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0
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3.0k
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Comment: Comment: Differential Gene Expression
18 months ago by jkim ▴ 130
0
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1
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3.0k
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Comment: Comment: Differential Gene Expression
18 months ago by jkim ▴ 130
0
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1
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524
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Comment: Comment: DEGs with uninsteresed sample files
19 months ago by jkim ▴ 130
3
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3
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524
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DEGs with uninsteresed sample files
design bulkRNAseq DEG matrix
updated 19 months ago by 13k • written 19 months ago by ▴ 130
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0
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1.1k
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Comment: C: Snakemake (MissingOutputException) doesn't seem to find output files.
2.1 years ago by jkim ▴ 130
2
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2
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1.1k
views
Snakemake (MissingOutputException) doesn't seem to find output files.
Snakemake
2.1 years ago by jkim ▴ 130
1
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5
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1.8k
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Retrieve all compound ID, Description from a ko ID
KEGG REST API
updated 3.8 years ago by ★ 2.2k • written 4.3 years ago by ▴ 130
0
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1
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1.8k
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Comment: C: Retrieve all compound ID, Description from a ko ID
4.3 years ago by jkim ▴ 130
0
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0
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1.8k
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Comment: C: Retrieve all compound ID, Description from a ko ID
4.3 years ago by jkim ▴ 130
1
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2
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3.0k
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Answer: A: featureCounts and bash
updated 4.6 years ago by 16k • written 4.6 years ago by ▴ 130
1
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0
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5.1k
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Answer: A: HISAT2 for loop shell scripting
5.0 years ago by jkim ▴ 130
0
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0
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5.1k
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Comment: C: Building RNAseq pipeline STAR-RSEM-tximport-DESeq2
5.2 years ago by jkim ▴ 130
6
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3
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5.1k
views
Building RNAseq pipeline STAR-RSEM-tximport-DESeq2
RNA-Seq pipeline
updated 5.2 years ago by ★ 3.6k • written 5.2 years ago by ▴ 130
42 results • Page 1 of 1
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