Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
759
views
Comment: Comment: Different comparisons in RNASeq Analysis
7 days ago by jkim ▴ 190
0
votes
1
reply
759
views
Comment: Comment: Different comparisons in RNASeq Analysis
7 days ago by jkim ▴ 190
0
votes
2
replies
687
views
Comment: Comment: Addressing two nuisance factors in RNAseq
8 weeks ago by jkim ▴ 190
4
votes
4
replies
687
views
Addressing two nuisance factors in RNAseq
bulkRNAseq
updated 8 weeks ago by 88k • written 8 weeks ago by ▴ 190
0
votes
0
replies
3.1k
views
Comment: Comment: DESEQ with time series data on mutant vs. wild-type?
8 months ago by jkim ▴ 190
1
vote
1
reply
3.1k
views
Comment: Comment: DESEQ with time series data on mutant vs. wild-type?
8 months ago by jkim ▴ 190
0
votes
1
reply
857
views
Comment: Comment: RNA seq data for normal samples
10 months ago by jkim ▴ 190
0
votes
0
replies
922
views
Comment: Comment: PCA plot
14 months ago by jkim ▴ 190
0
votes
0
replies
1.9k
views
Comment: Comment: PCA plot (Suggestions Needed)
14 months ago by jkim ▴ 190
1
vote
0
replies
1.1k
views
Comment: Comment: Error during demultiplexing by bcl2fastq
14 months ago by jkim ▴ 190
0
votes
1
reply
1.7k
views
Comment: Comment: 99.9999% of Q30 bases is normal?
14 months ago by jkim ▴ 190
0
votes
1
reply
1.7k
views
Comment: Comment: 99.9999% of Q30 bases is normal?
14 months ago by jkim ▴ 190
0
votes
0
replies
1.3k
views
Comment: Comment: create a gene count matrix csv file from seurat object
14 months ago by jkim ▴ 190
0
votes
1
reply
1.3k
views
Comment: Comment: create a gene count matrix csv file from seurat object
14 months ago by jkim ▴ 190
0
votes
1
reply
1.3k
views
Comment: Comment: create a gene count matrix csv file from seurat object
14 months ago by jkim ▴ 190
2
votes
6
replies
1.3k
views
create a gene count matrix csv file from seurat object
Seurat sparseMatrix
14 months ago by jkim ▴ 190
1
vote
1
reply
1.4k
views
Answer: Answer: RNAseq analysis: how to add new gene into an existing worm based reference
17 months ago by jkim ▴ 190
1
vote
1
reply
2.6k
views
Comment: Comment: bcl2fastq troubleshooting all reads dumped to "Undetermined"
18 months ago by jkim ▴ 190
0
votes
0
replies
460
views
% rRNAs discrepancy between sortMeRNA and read count matrices
rRNA
18 months ago by jkim ▴ 190
0
votes
0
replies
2.6k
views
Comment: Comment: Nextflow bwa-mem2 pipeline/channel question
19 months ago by jkim ▴ 190
0
votes
2
replies
2.4k
views
Comment: Comment: Mentor for a beginner bioinformatics student
20 months ago by jkim ▴ 190
0
votes
0
replies
1.6k
views
Comment: Comment: Merge fastq files across different lanes in Nextflow
20 months ago by jkim ▴ 190
3
votes
3
replies
1.6k
views
Merge fastq files across different lanes in Nextflow
Nextflow Fastq
20 months ago by jkim ▴ 190
1
vote
0
replies
1.6k
views
Answer: Answer: Merge fastq files across different lanes in Nextflow
20 months ago by jkim ▴ 190
0
votes
0
replies
2.2k
views
Comment: Comment: STAR index not working
21 months ago by jkim ▴ 190
0
votes
1
reply
1.1k
views
Comment: Comment: Batch effect consideration (re-seq the same sample twice)
21 months ago by jkim ▴ 190
4
votes
3
replies
1.1k
views
Batch effect consideration (re-seq the same sample twice)
RNA-seq batch-effect
updated 21 months ago by 45k • written 21 months ago by ▴ 190
0
votes
0
replies
1.4k
views
Comment: Comment: One sample has quite different # of reads from different lanes.
22 months ago by jkim ▴ 190
0
votes
1
reply
1.4k
views
Comment: Comment: One sample has quite different # of reads from different lanes.
22 months ago by jkim ▴ 190
4
votes
4
replies
1.4k
views
One sample has quite different # of reads from different lanes.
demultiplexing illumina fastq
22 months ago by jkim ▴ 190
0
votes
0
replies
1.8k
views
Comment: Comment: Double biological replication when using DESeq2
23 months ago by jkim ▴ 190
0
votes
0
replies
1.3k
views
Comment: Comment: How to interpret RNAseq output?
23 months ago by jkim ▴ 190
1
vote
0
replies
1.0k
views
Comment: Comment: mRNA library preparation Adapter ligation
2.1 years ago by jkim ▴ 190
0
votes
0
replies
1.9k
views
Comment: Comment: How to trim reads for Chip Seq analysis
2.1 years ago by jkim ▴ 190
0
votes
0
replies
1.1k
views
Answer: Answer: What is the best aligner for stranded RNASeq
2.1 years ago by jkim ▴ 190
0
votes
1
reply
2.8k
views
Comment: Comment: trimmomatic on scRNA seq data
2.1 years ago by jkim ▴ 190
0
votes
0
replies
2.4k
views
Comment: Comment: Comparing two RNA-Seq datasets
2.7 years ago by jkim ▴ 190
0
votes
1
reply
2.4k
views
Answer: Answer: Comparing two RNA-Seq datasets
2.7 years ago by jkim ▴ 190
1
vote
1
reply
1.3k
views
Comment: Comment: DE analysis with multiple factors
2.7 years ago by jkim ▴ 190
0
votes
1
reply
1.9k
views
Comment: Comment: Snakemake + singularity fails to locate bwa index files.
2.8 years ago by jkim ▴ 190
0
votes
1
reply
1.9k
views
Comment: Comment: Snakemake + singularity fails to locate bwa index files.
2.8 years ago by jkim ▴ 190
3
votes
5
replies
1.9k
views
Snakemake + singularity fails to locate bwa index files.
singularity snakemake bwa
updated 2.8 years ago by 23k • written 2.8 years ago by ▴ 190
0
votes
0
replies
3.0k
views
Comment: Comment: Read coverage shows a difference in IGV
2.8 years ago by jkim ▴ 190
0
votes
0
replies
3.0k
views
Comment: Comment: Read coverage shows a difference in IGV
2.8 years ago by jkim ▴ 190
0
votes
0
replies
3.0k
views
Comment: Comment: Read coverage shows a difference in IGV
2.8 years ago by jkim ▴ 190
0
votes
0
replies
3.0k
views
Comment: Comment: Read coverage shows a difference in IGV
2.8 years ago by jkim ▴ 190
3
votes
7
replies
3.0k
views
Read coverage shows a difference in IGV
coverage BAM
2.8 years ago by jkim ▴ 190
0
votes
0
replies
6.9k
views
Comment: Comment: Is there a limit for SAMTOOLS tview option?
2.8 years ago by jkim ▴ 190
0
votes
0
replies
2.3k
views
Comment: Comment: Filter out reads with hidden tags in bam files
2.8 years ago by jkim ▴ 190
0
votes
0
replies
2.3k
views
Comment: Comment: Filter out reads with hidden tags in bam files
2.8 years ago by jkim ▴ 190
77 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6