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Comment: C: Extract Base Based On Position From Bam File
updated 5.2 years ago by 45k • written 13.2 years ago by ▴ 890
2
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4
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31k
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Comment: A: Extract Base Based On Position From Bam File
updated 5.2 years ago by 45k • written 13.2 years ago by ▴ 890
1
vote
1
reply
101k
views
Answer: A: Extract Sub-Set Of Regions From Vcf File
updated 5.9 years ago by 45k • written 13.4 years ago by ▴ 890
0
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0
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7.5k
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Comment: Comment: Why Gatk Realignertargetcreator Outputs An Empty .Intervals???
updated 3.7 years ago by 45k • written 13.6 years ago by ▴ 890
10
votes
8
replies
15k
views
9 follow
Ribosomal Intervals For Collectrnaseqmetrics
rna-seq qc picard
updated 2.2 years ago by 45k • written 12.6 years ago by ▴ 890
9
votes
4
replies
8.2k
views
Tophat - Expectancy Of Properly Paired Reads?
tophat rna-seq
updated 6.4 years ago by 20 • written 13.1 years ago by ▴ 890
4
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0
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23k
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Answer: A: Installing Vcftools
updated 6.4 years ago by 45k • written 13.3 years ago by ▴ 890
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0
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2.5k
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Job: System developer at the Swedish National Genomics Infrastructure, SciLifeLab
software-development genomics sequencing
updated 2.5 years ago by 45k • written 7.7 years ago by ▴ 890
7
votes
2
replies
11k
views
Difference Between Picards Mergebamalignment And Mergesamfiles
picard
updated 8.5 years ago by ★ 2.1k • written 12.8 years ago by ▴ 890
1
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0
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3.3k
views
Job: Two system developers at the SNP&SEQ technology platform, Uppsala University, Sweden
system-developer
updated 2.7 years ago by 45k • written 11.0 years ago by ▴ 890
1
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1
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2.2k
views
Job: Two bioinformaticians at the SNP&SEQ technology platform, Uppsala University, Sweden
bioinformatician
updated 2.9 years ago by 45k • written 11.0 years ago by ▴ 890
9
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12
replies
4.6k
views
Samlocusiterator Skips Every Second Locus
picard java
updated 3.9 years ago by 45k • written 12.7 years ago by ▴ 890
3
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2
replies
5.5k
views
Missing Allele Balance Tag In Vcf File
gatk allele
updated 3.6 years ago by ▴ 120 • written 13.5 years ago by ▴ 890
1
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0
replies
3.9k
views
Answer: A: Cummerbund Help
11.7 years ago by Johan ▴ 890
5
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1
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38k
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Answer: A: Which Bioinformatic Friendly Pipeline Building Framework?
11.8 years ago by Johan ▴ 890
1
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1
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3.2k
views
Answer: A: Large Data Set Analysis With Cuffdiff
11.9 years ago by Johan ▴ 890
1
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0
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4.7k
views
Answer: A: Qscript Example For Pipelining Gatk With Queue
12.1 years ago by Johan ▴ 890
0
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0
replies
12k
views
Comment: C: Cuffdiff Command Line For Labels And Replicates
12.4 years ago by Johan ▴ 890
2
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2
replies
12k
views
Answer: A: Cuffdiff Command Line For Labels And Replicates
12.4 years ago by Johan ▴ 890
6
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6
replies
12k
views
Cuffdiff Command Line For Labels And Replicates
cuffdiff
12.4 years ago by Johan ▴ 890
0
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0
replies
31k
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Comment: C: Extract Base Based On Position From Bam File
12.4 years ago by Johan ▴ 890
0
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0
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4.4k
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Comment: C: Linear Regression Of Interacting Genotypes In Java
12.7 years ago by Johan ▴ 890
1
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1
reply
4.6k
views
Comment: C: Samlocusiterator Skips Every Second Locus
12.7 years ago by Johan ▴ 890
0
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0
replies
4.6k
views
Comment: C: Samlocusiterator Skips Every Second Locus
12.7 years ago by Johan ▴ 890
0
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2
replies
4.6k
views
Comment: C: Samlocusiterator Skips Every Second Locus
12.7 years ago by Johan ▴ 890
3
votes
1
reply
2.5k
views
Java Fasta Reference Iterator
java fasta
updated 12.7 years ago by 166k • written 12.7 years ago by ▴ 890
5
votes
1
reply
6.9k
views
What Are The (Non-Standard) Bd And Bi Tags In Samformat?
sam
updated 12.8 years ago by 166k • written 12.8 years ago by ▴ 890
0
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0
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9.3k
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Comment: C: How To Calculate The Coverage Of A Specific Interval Based On Data From A Bam Fi
12.8 years ago by Johan ▴ 890
2
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0
replies
46k
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Answer: A: Comparing 2 Large Lists (Millions Of Rows) To Identify Shared And Exclusive Elem
12.8 years ago by Johan ▴ 890
6
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0
replies
13k
views
Answer: A: Is Star Managing Strand-Specific Data ?
12.8 years ago by Johan ▴ 890
3
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2
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4.4k
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Answer: A: Linear Regression Of Interacting Genotypes In Java
12.8 years ago by Johan ▴ 890
0
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1
reply
10k
views
Comment: C: Contig Incompatibility For Depth Of Coverage Calculations Using Gatk
12.8 years ago by Johan ▴ 890
0
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1
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10k
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Comment: C: Contig Incompatibility For Depth Of Coverage Calculations Using Gatk
12.8 years ago by Johan ▴ 890
0
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2
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10k
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Answer: A: Contig Incompatibility For Depth Of Coverage Calculations Using Gatk
12.8 years ago by Johan ▴ 890
5
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0
replies
7.3k
views
Answer: A: Visualizing The Outputs Of Gatk/Depthofcoverage
12.8 years ago by Johan ▴ 890
0
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0
replies
5.6k
views
Comment: C: Transcript Assembly In Dense Genome Using Cufflinks
13.1 years ago by Johan ▴ 890
5
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4
replies
5.6k
views
Transcript Assembly In Dense Genome Using Cufflinks
cufflinks rna-seq
updated 13.1 years ago by ▴ 30 • written 13.1 years ago by ▴ 890
0
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0
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4.0k
views
Answer: A: Does Markduplicates Work If Mate Pair Information Is Not 'Fixed'?
13.1 years ago by Johan ▴ 890
1
vote
1
reply
10k
views
Answer: A: Vcftools, Command Not Found !
13.2 years ago by Johan ▴ 890
2
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1
reply
9.3k
views
Answer: A: How To Calculate The Coverage Of A Specific Interval Based On Data From A Bam Fi
13.2 years ago by Johan ▴ 890
3
votes
0
replies
5.8k
views
Answer: A: Vcf File With Variants And Genotypes For A "Single Individual"
13.2 years ago by Johan ▴ 890
0
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0
replies
31k
views
Comment: C: Extract Base Based On Position From Bam File
13.2 years ago by Johan ▴ 890
0
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1
reply
31k
views
Comment: C: Extract Base Based On Position From Bam File
13.2 years ago by Johan ▴ 890
0
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0
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3.8k
views
Comment: C: Use Of Dinup
13.2 years ago by Johan ▴ 890
1
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1
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3.8k
views
Comment: C: Use Of Dinup
13.2 years ago by Johan ▴ 890
0
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1
reply
3.8k
views
Comment: C: Use Of Dinup
13.2 years ago by Johan ▴ 890
4
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0
replies
3.8k
views
Answer: A: Microarray Class Prediction - For Continuous Data?
13.2 years ago by Johan ▴ 890
0
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0
replies
4.4k
views
Comment: C: Questions On Specifying And Merging Scatter/Gather In Gatk Parallelism
13.3 years ago by Johan ▴ 890
4
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1
reply
4.5k
views
Answer: A: Machine Learning To Find The More Informative Features To Predict And Outcome
13.3 years ago by Johan ▴ 890
5
votes
0
replies
6.1k
views
Answer: A: Platform Unit For Sam Read Group
13.3 years ago by Johan ▴ 890
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