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4
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0
replies
3.2k
views
Answer: A: Per Base Coverage
updated 18 months ago by 34k • written 9.5 years ago by 11k
0
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1
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6.9k
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Comment: C: bedtools intersect - something wrong with chromosome numbers >= 10?
updated 20 months ago by 34k • written 7.3 years ago by 11k
4
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1
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6.9k
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Answer: A: bedtools intersect - something wrong with chromosome numbers >= 10?
updated 20 months ago by 34k • written 7.3 years ago by 11k
16
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1
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59k
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Answer: A: Bedtools Compare Multiple Bed Files?
updated 20 months ago by 34k • written 9.9 years ago by 11k
51
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6
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59k
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Answer: A: Bedtools Compare Multiple Bed Files?
updated 20 months ago by 34k • written 9.9 years ago by 11k
1
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2
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6.0k
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Comment: C: bedtools: extracting no coverage regions
updated 21 months ago by 34k • written 7.4 years ago by 11k
6
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2
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6.0k
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Answer: A: bedtools: extracting no coverage regions
updated 21 months ago by 34k • written 7.4 years ago by 11k
14
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0
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17k
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Answer: A: Getting list of chromosome names from indexed BAM file
updated 21 months ago by 34k • written 7.4 years ago by 11k
3
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0
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4.8k
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Answer: A: Intersect multiple BED files
updated 21 months ago by 34k • written 5.7 years ago by 11k
2
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1
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4.4k
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Answer: A: Produce Bed File With Gaps In Coverage From A Bam File
updated 21 months ago by 34k • written 7.8 years ago by 11k
12
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1
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13k
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Answer: A: Binning Of Chromosome Data
updated 21 months ago by 34k • written 8.4 years ago by 11k
10
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1
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8.3k
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Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 8.7 years ago by 11k
4
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0
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8.3k
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Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 7.6 years ago by 11k
2
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1
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8.3k
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Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 7.8 years ago by 11k
2
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0
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8.3k
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Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 7.0 years ago by 11k
1
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0
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8.3k
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Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 7.8 years ago by 11k
1
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0
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8.3k
views
Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 7.6 years ago by 11k
1
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0
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8.3k
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Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 7.3 years ago by 11k
2
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0
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8.3k
views
Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 7.6 years ago by 11k
3
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0
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8.3k
views
Answer: A: Bedtools: Analyzing Genomic Features
updated 21 months ago by 34k • written 6.7 years ago by 11k
5
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1
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3.7k
views
Answer: A: Getting All Reads That Align To A Region In Compact Bed Format Using Bedtools?
updated 21 months ago by 34k • written 8.7 years ago by 11k
2
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0
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17k
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Comment: C: Splitting A Vcf File
updated 21 months ago by 34k • written 10.0 years ago by 11k
18
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1
reply
7.7k
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Answer: A: ./ Vs "0/0" In Vcf Files
updated 21 months ago by 34k • written 9.4 years ago by 11k
11
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0
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19k
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Answer: A: Number Of Reads In A Sam File Which Are Assigned To Each Chromosome?
updated 23 months ago by 34k • written 9.8 years ago by 11k
4
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0
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5.6k
views
Answer: A: How Can I Get All Coordinates With A Coverage Higher Than 5 Reads?
updated 23 months ago by 34k • written 7.9 years ago by 11k
0
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0
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5.7k
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Comment: C: Interpreting "Intersectbed" Output
updated 23 months ago by 34k • written 9.6 years ago by 11k
0
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0
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6.3k
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Comment: C: Softwares For Calculation Of Genome-Wide Alignments Coverage
updated 24 months ago by 34k • written 9.7 years ago by 11k
0
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0
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6.3k
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Comment: C: Softwares For Calculation Of Genome-Wide Alignments Coverage
updated 24 months ago by 34k • written 9.7 years ago by 11k
1
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0
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20k
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Comment: C: Calculate Exon Coverage Using Samtools
updated 24 months ago by 34k • written 10.1 years ago by 11k
13
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0
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4.0k
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Answer: A: How To Find The Nearest Gene To A Retrotransposon Insert?
updated 2.0 years ago by 34k • written 9.5 years ago by 11k
5
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3
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3.2k
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Answer: A: Finding An Genomic Intervals Shared For A Given Individual As Called By Two Or M
updated 2.0 years ago by 34k • written 9.8 years ago by 11k
1
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1
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13k
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Comment: C: Extract Sequences From Fasta Using Awk One-Liner
updated 2.0 years ago by 34k • written 9.9 years ago by 11k
18
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5
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15k
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Answer: A: Bioinformatics "Cheat Sheet"
updated 2.0 years ago by 34k • written 10.5 years ago by 11k
0
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0
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8.0k
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Comment: C: How To Efficiently Remove Snps That Are Present In All Samples?
updated 2.0 years ago by 34k • written 10.5 years ago by 11k
7
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2
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59k
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Answer: A: Selecting Random Pairs From Fastq?
updated 2.0 years ago by 34k • written 10.5 years ago by 11k
0
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0
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59k
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Comment: C: Selecting Random Pairs From Fastq?
updated 2.0 years ago by 34k • written 10.5 years ago by 11k
42
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13
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18k
views
Answer: A: What Are The Advantages/Disadvantages Of One-Based Vs. Zero-Based Genome Coordin
updated 2.0 years ago by 34k • written 10.5 years ago by 11k
6
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0
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9.0k
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Answer: A: How To Extract Specific Coordinates From Multifasta File
updated 2.0 years ago by 34k • written 10.5 years ago by 11k
0
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0
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2.4k
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Comment: C: Tracking The Version Of Third Party Tools Used
updated 2.0 years ago by 34k • written 10.6 years ago by 11k
4
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3
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2.4k
views
Answer: A: Tracking The Version Of Third Party Tools Used
updated 2.0 years ago by 34k • written 10.6 years ago by 11k
0
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0
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23k
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Comment: C: How To Remove Certain Sequences From A Fasta File
updated 2.0 years ago by 34k • written 10.7 years ago by 11k
0
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0
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3.8k
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Comment: C: Please Suggest Some Command-Line Tools For Displaying Abi Trace File On Windows
updated 2.1 years ago by 34k • written 10.5 years ago by 11k
4
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0
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6.0k
views
Answer: A: Dump Upstream Sequence
updated 2.1 years ago by 34k • written 10.0 years ago by 11k
0
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0
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35k
views
Comment: C: What Is The Quickest Algorithm For Range Overlap?
updated 2.1 years ago by 34k • written 6.7 years ago by 11k
13
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0
replies
35k
views
Answer: A: What Is The Quickest Algorithm For Range Overlap?
updated 2.1 years ago by 34k • written 11.1 years ago by 11k
11
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0
replies
135k
views
Comment: C: How Can I Convert Bam To Sam?
updated 2.1 years ago by 34k • written 10.1 years ago by 11k
10
votes
1
reply
16k
views
Answer: A: How Can I Split Bam Into Chromosome (In A Loop) Using Samtools?
updated 2.4 years ago by 34k • written 10.3 years ago by 11k
4
votes
0
replies
9.4k
views
Answer: A: The Longest Chromosome > Sizeof(Int32)
updated 2.6 years ago by 34k • written 10.0 years ago by 11k
15
votes
0
replies
44k
views
Answer: A: How To Split A Multiple Fasta
updated 2.9 years ago by 34k • written 11.1 years ago by 11k
2
votes
2
replies
11k
views
Answer: A: Code Golf: Digesting Fasta Sequences Into A Set Of Smaller Sequences
updated 3.0 years ago by 34k • written 11.2 years ago by 11k
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