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Showing :
answers
4
votes
1
reply
6.4k
views
Answer:
A: Bed File Of Mapq Sliding Window On A Bam File?
10.2 years ago by
Aaronquinlan
12k
5
votes
1
reply
7.4k
views
Answer:
A: Separate Bed File To Each 60Kb Bins
10.2 years ago by
Aaronquinlan
12k
14
votes
5
replies
11k
views
Answer:
A: Compute Binned Gc-Normalized Read Counts From Bam File
10.2 years ago by
Aaronquinlan
12k
3
votes
0
replies
3.6k
views
Answer:
A: Is It Possible To Filter Only Bookend Reads From A Bed File?
10.3 years ago by
Aaronquinlan
12k
6
votes
0
replies
11k
views
Answer:
A: How To Visually Display What Protein Domains Are Affected By A Mutation
10.4 years ago by
Aaronquinlan
12k
4
votes
0
replies
8.5k
views
Answer:
A: Looking For Good Books On Genomics
10.5 years ago by
Aaronquinlan
12k
0
votes
0
replies
7.4k
views
Answer:
A: Reliable Tools To Filter Vcf Format Files
10.6 years ago by
Aaronquinlan
12k
1
vote
1
reply
4.1k
views
Answer:
A: Calculating Coordinates Of Split Rna-Seq Reads Converted From Bam To Bed
10.6 years ago by
Aaronquinlan
12k
6
votes
1
reply
2.4k
views
Answer:
A: How To Melt A Bed File (With Bedops?)
10.6 years ago by
Aaronquinlan
12k
5
votes
1
reply
23k
views
Answer:
Answer: How To Use Coordinates In Order To Extract Sequences In Fasta File?
updated 19 months ago by
Ram
43k • written 10.6 years ago by
Aaronquinlan
12k
2
votes
0
replies
9.7k
views
Answer:
A: How To Randomly Select 20M Reads From A 200M Fastq File
10.7 years ago by
Aaronquinlan
12k
6
votes
1
reply
6.0k
views
Answer:
A: How Can I Convert Novoalign Output Format To Sam Or Bam?
updated 10.8 years ago by
Leonor Palmeira
3.9k • written 12.6 years ago by
Aaronquinlan
12k
1
vote
1
reply
8.7k
views
Answer:
A: Gemini: Integrative Exploration Of Genetic Variation And Genome Annotations
10.8 years ago by
Aaronquinlan
12k
3
votes
1
reply
14k
views
Answer:
A: Extract Coverage Track From Bam To Bed File
10.9 years ago by
Aaronquinlan
12k
27
votes
3
replies
22k
views
Answer:
A: Calculate Exon Coverage Using Samtools
updated 11.1 years ago by
seidel
11k • written 12.7 years ago by
Aaronquinlan
12k
2
votes
2
replies
17k
views
Answer:
A: Discrepancy In Samtools Mpileup/Depth And Bedtools Genomecoveragebed Counts
11.1 years ago by
Aaronquinlan
12k
10
votes
0
replies
14k
views
Answer:
A: Which Type Of Database Systems Are More Appropriate For Storing Information Extr
11.1 years ago by
Aaronquinlan
12k
3
votes
0
replies
4.9k
views
Answer:
A: Python Tabix Api - Getnames ?
11.2 years ago by
Aaronquinlan
12k
11
votes
1
reply
12k
views
Answer:
A: How To Count Genes In Genomic Regions Using A Gtf/Gff3 And A Bed File Of Regions
11.2 years ago by
Aaronquinlan
12k
13
votes
3
replies
42k
views
Answer:
A: Comparing 2 Large Lists (Millions Of Rows) To Identify Shared And Exclusive Elem
updated 11.2 years ago by
Obi Griffith
20k • written 11.2 years ago by
Aaronquinlan
12k
2
votes
0
replies
5.8k
views
Answer:
A: How To Intersect Two Tracks In Ucsc Table Browser And Get Fields From Both?
11.3 years ago by
Aaronquinlan
12k
8
votes
3
replies
13k
views
Answer:
A: How To Extract Scores From Bedgraph File Using Bed Tools
11.3 years ago by
Aaronquinlan
12k
4
votes
1
reply
7.1k
views
Answer:
A: How To Turn A Two Column Data File Containing Pairs Into A Matrix With Counts
11.3 years ago by
Aaronquinlan
12k
3
votes
1
reply
9.3k
views
Answer:
A: Getting Number Of Reads In Intervals With Bedtools
11.4 years ago by
Aaronquinlan
12k
4
votes
1
reply
13k
views
Answer:
A: How To Make Intervals In A Range Of Numbers?
11.4 years ago by
Aaronquinlan
12k
7
votes
2
replies
12k
views
Answer:
A: How To Get Annotation For Bed File From Another Bed File
11.4 years ago by
Aaronquinlan
12k
3
votes
2
replies
10k
views
Answer:
A: Tools To Identify Compound Heterozygous Variants?
11.7 years ago by
Aaronquinlan
12k
17
votes
5
replies
11k
views
Answer:
A: Picking Random Genomic Positions
11.8 years ago by
Aaronquinlan
12k
28
votes
3
replies
34k
views
Answer:
A: Calculating Gc Content For All Ccds
11.9 years ago by
Aaronquinlan
12k
3
votes
1
reply
2.6k
views
Answer:
A: What Formats Are People Using For Pooled Sequencing Data?
12.0 years ago by
Aaronquinlan
12k
5
votes
1
reply
27k
views
Answer:
A: Why You Need Perl/Python If You Know R/Shell [Ngs Data Analysis]
12.0 years ago by
Aaronquinlan
12k
7
votes
0
replies
6.7k
views
Answer:
A: Which Multiscale Genome Browser Is The Best At Visualizing Structural Variants?
12.1 years ago by
Aaronquinlan
12k
9
votes
4
replies
5.0k
views
Answer:
A: How Would You Scan The Human Genome ?
12.1 years ago by
Aaronquinlan
12k
5
votes
2
replies
7.2k
views
Answer:
A: Counting The Whole Insert Size From Paired-End Reads As Coverage
12.2 years ago by
Aaronquinlan
12k
2
votes
2
replies
4.5k
views
Answer:
A: Joining Snpeff And Vcf
12.2 years ago by
Aaronquinlan
12k
8
votes
1
reply
4.8k
views
Answer:
A: Bedtools: Top N Most Similar Regions When Comparing Two Bed/Wig/Bam Files?
12.2 years ago by
Aaronquinlan
12k
27
votes
5
replies
33k
views
Answer:
Answer: How To Use Bedtools To Extract Promoters From A Mouse Bed File
updated 2.2 years ago by
Ram
43k • written 12.2 years ago by
Aaronquinlan
12k
3
votes
1
reply
16k
views
Answer:
A: Gwas Quantitative Trait Power Calculation
12.3 years ago by
Aaronquinlan
12k
11
votes
7
replies
7.5k
views
Answer:
A: Softwares For Calculation Of Genome-Wide Alignments Coverage
12.3 years ago by
Aaronquinlan
12k
8
votes
3
replies
12k
views
Answer:
A: Calculation Of Average Mapping Quality Over A Given Genomic Region
12.3 years ago by
Aaronquinlan
12k
3
votes
0
replies
8.0k
views
Answer:
A: Convert Bam To Bed/Fam/Bim
12.4 years ago by
Aaronquinlan
12k
8
votes
0
replies
15k
views
Answer:
A: Multi Thread Bedtools
12.4 years ago by
Aaronquinlan
12k
8
votes
4
replies
17k
views
Answer:
A: Extract Sequences From Fasta Using Awk One-Liner
12.5 years ago by
Aaronquinlan
12k
3
votes
1
reply
7.7k
views
Answer:
A: Reporting The Bam Reads Overlapping A Set Of Intervals With Bedtools
12.5 years ago by
Aaronquinlan
12k
4
votes
0
replies
7.1k
views
Answer:
A: Snp With More Than One Base ?
12.6 years ago by
Aaronquinlan
12k
2
votes
2
replies
3.2k
views
Answer:
A: Consolidating Two Columns
12.7 years ago by
Aaronquinlan
12k
14
votes
3
replies
16k
views
Answer:
A: Justifying Learning Linux For Bioinformatics
12.7 years ago by
Aaronquinlan
12k
6
votes
6
replies
3.7k
views
Answer:
A: Coments On This Feature: Alignment Coordinate Projection From 1.Bam To 2.Bam To
12.8 years ago by
Aaronquinlan
12k
6
votes
3
replies
3.9k
views
Answer:
A: How To Filter Out Sequences With No Hits From Bwa Sam Output?
12.8 years ago by
Aaronquinlan
12k
11
votes
6
replies
7.7k
views
Answer:
Answer: Randomize Read Order In Multigbp Fastq File?
updated 7 weeks ago by
Ram
43k • written 12.8 years ago by
Aaronquinlan
12k
119 results • Page
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