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118
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Tripal installation question
BioDb Drush Tripal Drupal
5 days ago by alslonik ▴ 250
3
votes
1
reply
414
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BUSCO results vs. Orthofinder
Busco Orthofinder Orthologs
updated 8 months ago by 14k • written 8 months ago by ▴ 250
7
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6
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1.0k
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Integrating Sequenceserver with Jbrowse
sequenceserver jbrowse
12 months ago by alslonik ▴ 250
4
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0
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1.0k
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Answer: Answer: Integrating Sequenceserver with Jbrowse
12 months ago by alslonik ▴ 250
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1.0k
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Comment: Comment: Integrating Sequenceserver with Jbrowse
12 months ago by alslonik ▴ 250
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1
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1.0k
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Comment: Comment: Integrating Sequenceserver with Jbrowse
13 months ago by alslonik ▴ 250
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0
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749
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Comment: Comment: Jbrowse reference sequence issue
15 months ago by alslonik ▴ 250
3
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4
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749
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Jbrowse reference sequence issue
Jbrowse
15 months ago by alslonik ▴ 250
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1.8k
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Comment: Comment: ANGeS - Ancestral Genome reconstruction
16 months ago by alslonik ▴ 250
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2
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1.8k
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ANGeS - Ancestral Genome reconstruction
ancestral genome
16 months ago by alslonik ▴ 250
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0
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2.7k
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Comment: Comment: Error when trying to import GTF files using rtracklayer's import function
18 months ago by alslonik ▴ 250
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2.7k
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Comment: Comment: Error when trying to import GTF files using rtracklayer's import function
20 months ago by alslonik ▴ 250
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2
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2.7k
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Comment: Comment: Error when trying to import GTF files using rtracklayer's import function
20 months ago by alslonik ▴ 250
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0
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2.5k
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Answer: A: Genome de novo annotation with Maker
3.2 years ago by alslonik ▴ 250
7
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6
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2.5k
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Genome de novo annotation with Maker
Maker SNAP Genome annotation
3.2 years ago by alslonik ▴ 250
0
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1
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9.2k
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Answer: A: How to make a rooted tree ultrametric
3.3 years ago by alslonik ▴ 250
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0
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4.2k
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Comment: C: Maker Gff3 file issues
3.3 years ago by alslonik ▴ 250
1
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10
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4.2k
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Maker Gff3 file issues
genome browser genome annotation JBrowse
updated 10 months ago by 7.5k • written 4.2 years ago by ▴ 250
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0
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14k
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Answer: A: How to write a list of DNAStringsets as a FASTA file in R
3.5 years ago by alslonik ▴ 250
5
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0
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53k
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Answer: A: Idenity, e value or bitscore ?
3.7 years ago by alslonik ▴ 250
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0
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2.0k
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Comment: C: convert the gff3 file from ensembl into 'feature table' (Sequin format/.tbl file
4.1 years ago by alslonik ▴ 250
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2
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3.0k
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Filtering GFF annotations file
gff R Maker GFF
4.1 years ago by alslonik ▴ 250
4
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0
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2.0k
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Answer: A: Reviewing Maker annotation
4.1 years ago by alslonik ▴ 250
4
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1
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2.0k
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Reviewing Maker annotation
genome Annotation Maker
4.1 years ago by alslonik ▴ 250
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0
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35k
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Answer: A: List Of Genome Sequencing Centers/Institutes
4.1 years ago by alslonik ▴ 250
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1
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4.2k
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Comment: C: Maker Gff3 file issues
4.2 years ago by alslonik ▴ 250
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0
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4.2k
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Comment: C: Gff3 file issues
4.2 years ago by alslonik ▴ 250
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0
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4.2k
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Comment: C: Gff3 file issues
4.2 years ago by alslonik ▴ 250
0
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1
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4.2k
views
Comment: C: Maker derived import of gff file to JBrowse failure ...
4.2 years ago by alslonik ▴ 250
0
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0
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2.5k
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Comment: C: Genome de novo annotation with Maker
4.2 years ago by alslonik ▴ 250
0
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1
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2.5k
views
Comment: C: Genome de novo annotation with Maker
4.2 years ago by alslonik ▴ 250
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0
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4.2k
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Comment: C: How to align a protein set to a genome?
4.2 years ago by alslonik ▴ 250
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1
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4.2k
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Comment: C: How to align a protein set to a genome?
4.2 years ago by alslonik ▴ 250
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1
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4.2k
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Comment: C: How to align a protein set to a genome?
4.2 years ago by alslonik ▴ 250
0
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1
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4.2k
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Comment: C: How to align a protein set to a genome?
4.2 years ago by alslonik ▴ 250
1
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1
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4.2k
views
Comment: C: How to align a protein set to a genome?
4.2 years ago by alslonik ▴ 250
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0
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8.7k
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Comment: C: Training Augustus for Maker
4.3 years ago by alslonik ▴ 250
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0
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6.6k
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Comment: C: GATK HaolotypeCaller takes too much time for variant calling
4.3 years ago by alslonik ▴ 250
0
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1
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6.6k
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Comment: C: GATK HaolotypeCaller takes too much time for variant calling
4.3 years ago by alslonik ▴ 250
0
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0
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3.5k
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Comment: C: How can I generate a .vcf faster with GATK - HaplotypleCaller?
4.3 years ago by alslonik ▴ 250
1
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0
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1.7k
views
Answer: A: falcon unzip output
4.4 years ago by alslonik ▴ 250
0
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0
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3.0k
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Comment: C: De novo plant genome assembly
4.4 years ago by alslonik ▴ 250
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0
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1.6k
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Comment: C: Falcon - Estimation of free disc space needed
4.6 years ago by alslonik ▴ 250
5
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6
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1.6k
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Falcon - Estimation of free disc space needed
Assembly PacBio Falcon
4.6 years ago by alslonik ▴ 250
2
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2
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1.6k
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Answer: A: Falcon - Estimation of free disc space needed
4.6 years ago by alslonik ▴ 250
0
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1
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1.6k
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Comment: C: Falcon - Estimation of free disc space needed
4.6 years ago by alslonik ▴ 250
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1
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3.0k
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Comment: C: De novo plant genome assembly
4.6 years ago by alslonik ▴ 250
7
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8
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3.0k
views
6 follow
De novo plant genome assembly
Assembly PacBio Chromium genome Falcon
4.6 years ago by alslonik ▴ 250
0
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0
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724
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SPADES - STAGE == Distance Estimation. resolvable_repeat_length_bound set to 10000. Shows no signs of life in log for 12h.
Assembly assembly
4.6 years ago by alslonik ▴ 250
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0
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38k
views
Answer: A: How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
4.6 years ago by alslonik ▴ 250
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