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Answer: A: First thing to do when you receive your sequenced genome of interest.
updated 2.0 years ago by 35k • written 7.6 years ago by ★ 1.3k
2
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1
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1.9k
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Answer: A: What size should I expect from a SFF file?
updated 2.1 years ago by 35k • written 7.7 years ago by ★ 1.3k
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2
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2.9k
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Answer: A: TRF output to .gff file
updated 2.1 years ago by 35k • written 7.7 years ago by ★ 1.3k
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0
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4.9k
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Answer: A: How to check whether a genome is circular
updated 2.1 years ago by 35k • written 6.2 years ago by ★ 1.3k
2
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1
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3.2k
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Answer: A: 454 Order Of Contigs Assembly And Mapping
updated 2.3 years ago by 35k • written 9.8 years ago by ★ 1.3k
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4.2k
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Answer: A: Extracting A Sequence By Position Using Perl
updated 2.4 years ago by 35k • written 10.9 years ago by ★ 1.3k
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0
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3.0k
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Answer: A: Simulate Sff File
updated 2.4 years ago by 35k • written 11.1 years ago by ★ 1.3k
9
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Answer: A: Order Sequences By Number Of Times Found
updated 3.4 years ago by 35k • written 11.6 years ago by ★ 1.3k
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1
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5.2k
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Answer: A: Is Newbler still available for download
4.6 years ago by lexnederbragt ★ 1.3k
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0
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1.5k
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Answer: A: Getting reads contributing to a velvet assembly - contig
5.1 years ago by lexnederbragt ★ 1.3k
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0
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1.8k
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Answer: A: Evaluation of PacBio only de novo assembly
5.3 years ago by lexnederbragt ★ 1.3k
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0
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2.0k
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Answer: A: Cleaning FASTQ files containing a contamination sequence.
5.3 years ago by lexnederbragt ★ 1.3k
0
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1
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4.9k
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Answer: A: Newbler 3 assembler download - assembly of highly heterozygous genome
5.4 years ago by lexnederbragt ★ 1.3k
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1.7k
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Answer: A: alternative to quiver
6.2 years ago by lexnederbragt ★ 1.3k
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1
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3.0k
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Answer: A: Tool for PacBio Denovo assembly of diploid plant genome (size 500mb) having aro
6.3 years ago by lexnederbragt ★ 1.3k
2
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1
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7.8k
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Answer: A: Install HGAP for de novo PacBio Assembly
6.3 years ago by lexnederbragt ★ 1.3k
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1.3k
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Answer: A: 454 sequencing: DETAILED explanation??
6.4 years ago by lexnederbragt ★ 1.3k
0
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0
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1.4k
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Answer: A: problem with newbler(error)
6.6 years ago by lexnederbragt ★ 1.3k
2
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1
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2.4k
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Answer: A: velvet user manual - node lengths????
6.7 years ago by lexnederbragt ★ 1.3k
1
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1
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1.4k
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Answer: A: Newbler seems stop
6.8 years ago by lexnederbragt ★ 1.3k
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0
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2.3k
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Answer: A: Plasmid Detection in the SMRT/PacBios data
7.0 years ago by lexnederbragt ★ 1.3k
2
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0
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5.5k
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Answer: A: What are the best approaches to evaluate a genome assembly using the 'intrinsic'
7.1 years ago by lexnederbragt ★ 1.3k
9
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1
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14k
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Answer: A: Best software to assemble bacterial genomes
7.2 years ago by lexnederbragt ★ 1.3k
0
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1
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2.9k
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Answer: Answer: Paired-end 454 data - forward run consisting only of TCAG
updated 4 weeks ago by 35k • written 7.4 years ago by ★ 1.3k
2
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0
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2.0k
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Answer: A: De Novo Genome Assembler Preferring Shorter Error-Free Contigs
7.8 years ago by lexnederbragt ★ 1.3k
1
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1
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4.8k
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Answer: A: Newbler: Merged Miseq Reads + Mate Pairs?
7.8 years ago by lexnederbragt ★ 1.3k
7
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0
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18k
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Answer: A: How Did You Learn Good Practice In Bioinformatics/Computational Biology?
8.0 years ago by lexnederbragt ★ 1.3k
0
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0
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2.3k
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Answer: A: Python Check Correct Bam Or Correct Fastq Format
8.7 years ago by lexnederbragt ★ 1.3k
1
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0
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3.7k
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Answer: A: Cap3 Integration Of Velvet And Newbler Assemblies
9.2 years ago by lexnederbragt ★ 1.3k
2
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0
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2.3k
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Answer: A: Empty Output With Pacbiotoca
updated 9.3 years ago by 91k • written 9.3 years ago by ★ 1.3k
2
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1
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4.8k
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Answer: A: Pacbio Rna-Seq Protocol
9.5 years ago by lexnederbragt ★ 1.3k
0
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0
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2.3k
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Answer: A: Puzzle - Strange Contig Assembly In Newbler - Trimmed Ends
9.7 years ago by lexnederbragt ★ 1.3k
9
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1
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5.2k
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Answer: A: What Does Agp Stand For?
updated 9.8 years ago by 18k • written 9.8 years ago by ★ 1.3k
1
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0
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2.9k
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Answer: A: De Novo Assembly With 1X Coverage?
9.9 years ago by lexnederbragt ★ 1.3k
3
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0
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2.3k
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Answer: A: Quality Scores 454
9.9 years ago by lexnederbragt ★ 1.3k
2
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1
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10k
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Answer: A: Cut The Reads Of A Paired End Fastq File
10.1 years ago by lexnederbragt ★ 1.3k
1
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4
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2.2k
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Answer: A: Newbler 454Trimstatus.Txt
10.1 years ago by lexnederbragt ★ 1.3k
1
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0
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3.9k
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Answer: A: Transcripome Data Analysis Using Cd-Hits
10.2 years ago by lexnederbragt ★ 1.3k
2
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0
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1.8k
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Answer: A: Newbler Statistics
10.4 years ago by lexnederbragt ★ 1.3k
1
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2
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5.9k
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Answer: A: Detecting Polyploidy Using An Assembly
10.4 years ago by lexnederbragt ★ 1.3k
1
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0
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2.2k
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Answer: A: Is There A Way To Convert Gs Mapper Output To Bam File?
10.4 years ago by lexnederbragt ★ 1.3k
1
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0
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2.4k
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Answer: A: Genbank Annotation Liftover Between Prokaryote Genomes
10.4 years ago by lexnederbragt ★ 1.3k
1
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0
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4.6k
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Answer: A: Sfffile Program Of Roche 454
10.7 years ago by lexnederbragt ★ 1.3k
9
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3
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16k
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Answer: A: Circular Genome??
10.9 years ago by lexnederbragt ★ 1.3k
2
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0
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1.9k
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Answer: A: What Is The Optimal Number Of Cpus For Newbler?
11.0 years ago by lexnederbragt ★ 1.3k
1
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0
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6.2k
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Answer: A: Denovo Assembly/Scafolding Pipeline(S) For The Eukaryote Genome: Single End Illu
11.1 years ago by lexnederbragt ★ 1.3k
1
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0
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2.4k
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Answer: A: 454 Gap Closures
11.2 years ago by lexnederbragt ★ 1.3k
4
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2
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23k
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Answer: A: Where Do I Find The 16S Rdna Reference Sequences (Metagenomics)
11.4 years ago by lexnederbragt ★ 1.3k
8
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0
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21k
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Answer: A: Recommend Your Favorite Introductory "R In Bioinformatics" Books And Resources
11.6 years ago by lexnederbragt ★ 1.3k
2
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2
replies
5.7k
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Answer: A: How To Close Gaps In A 454 Assembly In Silico?
11.6 years ago by lexnederbragt ★ 1.3k
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