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908
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Comment: Comment: Obtaining directionality of pathways
4 months ago by darklings ▴ 480
5
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491
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Answer: Answer: How to get experience as a bioinformatics software developer
11 months ago by darklings ▴ 480
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0
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2.0k
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Comment: Comment: genefu for PAM50 prediction
12 months ago by darklings ▴ 480
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1.7k
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Answer: Answer: how can i convert my gene list to a format that reactome recognises?
20 months ago by darklings ▴ 480
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1.6k
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Comment: Comment: Looping over a function in R, and needing a variable name to save output as uniq
21 months ago by darklings ▴ 480
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1
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1.6k
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Comment: Comment: Looping over a function in R, and needing a variable name to save output as uniq
21 months ago by darklings ▴ 480
1
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1
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1.6k
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Answer: Answer: Looping over a function in R, and needing a variable name to save output as uniq
21 months ago by darklings ▴ 480
1
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0
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1.6k
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Answer: Answer: How to find the functions of Reactome pathways?
21 months ago by darklings ▴ 480
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0
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10k
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Comment: Comment: "[E::bgzf_read] Read block operation failed" error - possible truncation/corrupt
22 months ago by darklings ▴ 480
0
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1
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10k
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Comment: Comment: "[E::bgzf_read] Read block operation failed" error - possible truncation/corrupt
22 months ago by darklings ▴ 480
0
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0
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1.4k
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Comment: Comment: How can I join multiple columns from different datasets together in R?
22 months ago by darklings ▴ 480
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1
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586
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Answer: Answer: TWAS analysis
22 months ago by darklings ▴ 480
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1.4k
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Answer: Answer: Using R Studio on Cloud
22 months ago by darklings ▴ 480
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0
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465
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Comment: Comment: Predicting Drug responds from somatic mutations
23 months ago by darklings ▴ 480
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0
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870
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Answer: Answer: Diseases related pathways
23 months ago by darklings ▴ 480
1
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0
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851
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Comment: Comment: Reactome website gene expression analysis
23 months ago by darklings ▴ 480
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1.7k
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Comment: Comment: Convert multiple rows value retrieved from ensemble biomart to comma separated
23 months ago by darklings ▴ 480
1
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3.1k
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Answer: Answer: Getting all gene members in a Reactome Pathway
24 months ago by darklings ▴ 480
0
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0
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841
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Answer: Answer: Reactome reaction enumeration with DefinedSets
24 months ago by darklings ▴ 480
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0
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1.5k
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Comment: Comment: How to add space in specific location in a barplot using ggplot2
24 months ago by darklings ▴ 480
0
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1
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1.5k
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Comment: Comment: How to add space in specific location in a barplot using ggplot2
24 months ago by darklings ▴ 480
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0
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1.5k
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Answer: Answer: Reactome Pathway Analysis from command line
24 months ago by darklings ▴ 480
3
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0
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4.0k
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Answer: A: Is there a way to visualize log fold changes for Reactome pathways in R?
2.0 years ago by darklings ▴ 480
0
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0
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695
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Answer: A: overlay of DE data on reactome pathway
2.1 years ago by darklings ▴ 480
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0
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2.5k
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Answer: Answer: Graph viewer for Reactome Pathways
updated 12 weeks ago by 38k • written 2.1 years ago by ▴ 480
1
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0
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680
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Comment: C: Annotating gene names: Why having different number of ensembl IDs using biomaRt
updated 2.1 years ago by 38k • written 2.1 years ago by ▴ 480
13
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4
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24k
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Answer: A: installing samtools with conda - overcoming two common errors
2.3 years ago by darklings ▴ 480
0
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0
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808
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Answer: A: Incomplete reactome.org all pathway level to ENSEMBL ID annotation files
2.4 years ago by darklings ▴ 480
2
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0
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1.4k
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Comment: C: Is it good to merge transcripts tpm to gene which is of different gene type?
2.4 years ago by darklings ▴ 480
8
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8
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3.6k
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Which RNA-seq unit should be used in machine learning models?
RNA-Seq machine learning counts
2.4 years ago by darklings ▴ 480
2
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0
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1.6k
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Answer: A: How can I know when a pathway was included in Reactome?
2.4 years ago by darklings ▴ 480
0
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1
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5.0k
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Comment: C: Is there a way to get the name or IDs of genes with the goseq table?
3.1 years ago by darklings ▴ 480
0
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0
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616
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Comment: C: Getting information about shortening or lengthening of UTRs from RNAseq data
3.2 years ago by darklings ▴ 480
0
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0
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30k
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Comment: C: output TMM normalized counts with edgeR
3.2 years ago by darklings ▴ 480
7
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2
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5.0k
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Answer: A: Is there a way to get the name or IDs of genes with the goseq table?
3.3 years ago by darklings ▴ 480
0
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0
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1.4k
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Comment: C: How to interpret the eQTLs in cancer
3.3 years ago by darklings ▴ 480
0
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2
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1.4k
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How to interpret the eQTLs in cancer
RNA-Seq SNP eqtl TCGA
updated 3.3 years ago by ▴ 30 • written 4.3 years ago by ▴ 480
0
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1
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8.3k
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Comment: C: Best-suited unit of expression to perform between-sample comparison
3.7 years ago by darklings ▴ 480
1
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1
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8.3k
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Comment: C: Best-suited unit of expression to perform between-sample comparison
3.7 years ago by darklings ▴ 480
1
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1
reply
2.0k
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Answer: A: genefu for PAM50 prediction
3.7 years ago by darklings ▴ 480
4
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1
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3.6k
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Answer: A: What kind of unit of RNA-seq should be used in machine learning models?
3.7 years ago by darklings ▴ 480
0
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0
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3.6k
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Comment: C: What kind of unit of RNA-seq should be used in machine learning models?
3.7 years ago by darklings ▴ 480
0
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0
replies
1.9k
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Comment: C: issues with GTEx data annotation files
4.2 years ago by darklings ▴ 480
0
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1
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1.9k
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Comment: C: issues with GTEx data annotation files
4.2 years ago by darklings ▴ 480
0
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1
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194k
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Comment: C: How To Update R In Ubuntu ?
4.4 years ago by darklings ▴ 480
0
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1
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3.6k
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Comment: C: What kind of read counts of RNA-seq should be used in machine learning models?
4.4 years ago by darklings ▴ 480
1
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1
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3.6k
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Answer: A: What kind of read counts of RNA-seq should be used in machine learning models?
4.4 years ago by darklings ▴ 480
1
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1
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1.6k
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Comment: C: rsID and its link with disease/traits/phenotype
4.4 years ago by darklings ▴ 480
0
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0
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1.4k
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Comment: C: How to retrieve Ensembl phenotype data associated with Ensembl variations using
5.4 years ago by darklings ▴ 480
5
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2
replies
1.4k
views
How to retrieve Ensembl phenotype data associated with Ensembl variations using Perl API
ensembl perl API
updated 5.4 years ago by ★ 2.2k • written 5.4 years ago by ▴ 480
58 results • Page 1 of 2
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