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Answer:
Answer: How to determine n and c terminal nucleotide bases from fasta sequences via R or
4 months ago by
bk11
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1
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532
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Comment:
Comment: Cellranger: Demux pooled (hashing antibodies) GEX and VDJ 10x sequence fastq dat
6 months ago by
bk11
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1.2k
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Answer:
Answer: dittoHeatmap; adding column labels on the heatmap
6 months ago by
bk11
★ 3.1k
0
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0
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809
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Comment:
Comment: Bulk RNA seq PCA plot issues
7 months ago by
bk11
★ 3.1k
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0
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1.3k
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Comment:
Comment: Permutations FGSEA
7 months ago by
bk11
★ 3.1k
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1
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1.3k
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Comment:
Comment: Help with subset seurat object by a column in metadata
7 months ago by
bk11
★ 3.1k
1
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1
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1.0k
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Answer:
Answer: Dealing with 2 different layers of counts within RNA assay in seurat
7 months ago by
bk11
★ 3.1k
1
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0
replies
597
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Comment:
Comment: Pedigree information
7 months ago by
bk11
★ 3.1k
0
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1
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495
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Answer:
Answer: Merging bfiles
7 months ago by
bk11
★ 3.1k
1
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0
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502
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Comment:
Comment: Extracting column from one seurat object based on common column and adding to th
7 months ago by
bk11
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0
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437
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Comment:
Comment: Pre-imputation checks using 1000G data (hg19) for a hg38 VCF
7 months ago by
bk11
★ 3.1k
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0
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555
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Answer:
Answer: Best approach for identifying top proteins in a single cluster in single-cell an
7 months ago by
bk11
★ 3.1k
2
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0
replies
661
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Answer:
Answer: High inconsistency between edgeR and DESeq2
8 months ago by
bk11
★ 3.1k
0
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1
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871
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Answer:
Answer: Best practice for gene ontology/pathway/geneset enrichment in 10x data
8 months ago by
bk11
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0
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1.1k
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Answer:
Answer: Plink HWE QC question
8 months ago by
bk11
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0
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1
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496
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Comment:
Comment: How to merge two species of scATAC data
8 months ago by
bk11
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1
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631
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Comment:
Comment: CCA integration
8 months ago by
bk11
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0
votes
0
replies
703
views
Answer:
Answer: Enhanced Volcano not working on ANY data. Coerces everything to NaN
8 months ago by
bk11
★ 3.1k
0
votes
0
replies
671
views
Comment:
Comment: Using findmarker of seurat with different test.use but getting the same resulat.
8 months ago by
bk11
★ 3.1k
2
votes
0
replies
721
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Answer:
Answer: Updating phenotype column for .ped .fam files (PLINK --pheno not working)
8 months ago by
bk11
★ 3.1k
0
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0
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1.5k
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Answer:
Answer: Remove part of a header in a fasta file
8 months ago by
bk11
★ 3.1k
0
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0
replies
1.5k
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Comment:
Comment: Seurat V5 Subscript Out of Bounds Error
8 months ago by
bk11
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0
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1
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679
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Comment:
Comment: R package to visualize multiple aligned chromatograms
9 months ago by
bk11
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1
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1
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647
views
Answer:
Answer: Appending a Poly-A Tail to a Reference Transcriptome
9 months ago by
bk11
★ 3.1k
2
votes
1
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1.1k
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Answer:
Answer: Plotting LD heat map with plink.ld result
9 months ago by
bk11
★ 3.1k
0
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0
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1.0k
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Comment:
Comment: Last against ncbi nr database
9 months ago by
bk11
★ 3.1k
1
vote
0
replies
415
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Comment:
Comment: QC for UKB GWAS data
9 months ago by
bk11
★ 3.1k
1
vote
1
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1.0k
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Comment:
Comment: Last against ncbi nr database
9 months ago by
bk11
★ 3.1k
1
vote
1
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574
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Comment:
Comment: Where to find open access data of SNP arrays to perform GWAS
9 months ago by
bk11
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0
votes
0
replies
868
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Comment:
Comment: Unable to open HDF5 file
9 months ago by
bk11
★ 3.1k
1
vote
0
replies
647
views
Comment:
Comment: plink2 giving multiple errors
9 months ago by
bk11
★ 3.1k
0
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1
reply
647
views
Comment:
Comment: plink2 giving multiple errors
9 months ago by
bk11
★ 3.1k
0
votes
0
replies
394
views
Comment:
Comment: how to visualize Geno Ontology classification
10 months ago by
bk11
★ 3.1k
1
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1
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497
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Answer:
Answer: Remove bacterial and protoza from Kraken2 EuPathDB
10 months ago by
bk11
★ 3.1k
1
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0
replies
1.6k
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Comment:
Comment: Can't increase font size for x axis
10 months ago by
bk11
★ 3.1k
2
votes
1
reply
1.6k
views
Answer:
Answer: Can't increase font size for x axis
10 months ago by
bk11
★ 3.1k
0
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0
replies
3.5k
views
Answer:
Answer: Good Bioinformatics Jokes/Puns?
10 months ago by
bk11
★ 3.1k
0
votes
1
reply
1.7k
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Answer:
Answer: Should I normalize and scale my data again after doing subset(seu, idents=" ") i
10 months ago by
bk11
★ 3.1k
0
votes
1
reply
1.2k
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Comment:
Comment: Histogram of normalized counts for each cell type
10 months ago by
bk11
★ 3.1k
1
vote
0
replies
1.2k
views
Comment:
Comment: ROH and Manhattan plot
10 months ago by
bk11
★ 3.1k
2
votes
1
reply
1.2k
views
Answer:
Answer: Histogram of normalized counts for each cell type
updated 11 months ago by
Ram
45k • written 11 months ago by
bk11
★ 3.1k
1
vote
1
reply
1.2k
views
Comment:
Comment: ROH and Manhattan plot
11 months ago by
bk11
★ 3.1k
0
votes
1
reply
1.7k
views
Comment:
Comment: Subset cells in Seurat data based on reads and gene expression
updated 11 months ago by
Ram
45k • written 11 months ago by
bk11
★ 3.1k
0
votes
1
reply
1.7k
views
Answer:
Answer: Subset cells in Seurat data based on reads and gene expression
updated 11 months ago by
Ram
45k • written 11 months ago by
bk11
★ 3.1k
1
vote
1
reply
1.2k
views
Answer:
Answer: Am I getting TPM correct from tcga?
updated 11 months ago by
Ram
45k • written 11 months ago by
bk11
★ 3.1k
0
votes
0
replies
1.2k
views
Comment:
Comment: METAL ERROR: The command you issued could not be processed ...
11 months ago by
bk11
★ 3.1k
2
votes
1
reply
950
views
Answer:
Answer: Consistent cluster coloring
11 months ago by
bk11
★ 3.1k
1
vote
1
reply
1.5k
views
Answer:
Answer: Slot to pull data from for DoHeatmap
11 months ago by
bk11
★ 3.1k
1
vote
1
reply
688
views
Comment:
Comment: Phasing human samples with Shapeit4
11 months ago by
bk11
★ 3.1k
1
vote
0
replies
612
views
Answer:
Answer: MGI DNBelab C Series High-throughput Single-cell RNA Library Preparation Set V3.
11 months ago by
bk11
★ 3.1k
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