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Comment: Comment: Identifying common DEGs among multiple datasets
1 day ago by bk11 ★ 1.2k
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305
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Answer: Answer: How to display all top markers in the heatmap by DoHeatmap (Seurat) when there a
updated 1 day ago by 40k • written 1 day ago by ★ 1.2k
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610
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Comment: Comment: Inflated GWAS test statistic after merging multiple batches of genotype dataset
1 day ago by bk11 ★ 1.2k
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610
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Answer: Answer: Inflated GWAS test statistic after merging multiple batches of genotype dataset
2 days ago by bk11 ★ 1.2k
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335
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Comment: Comment: Generate a fraction of immune cell between two condition from single cell RNAseq
3 days ago by bk11 ★ 1.2k
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305
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Answer: Answer: differential gene expression analysis comparing different conditions using scRNA
4 days ago by bk11 ★ 1.2k
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191
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Answer: Answer: Automatic Cluster Annotation to the subsets of immune cells
5 days ago by bk11 ★ 1.2k
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248
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Comment: Comment: Multiple testing adjustment for stepwise model selection
6 days ago by bk11 ★ 1.2k
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346
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Answer: Answer: Data Import Issue detectRUNS R
6 days ago by bk11 ★ 1.2k
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346
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Comment: Comment: Data Import Issue detectRUNS R
6 days ago by bk11 ★ 1.2k
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334
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Comment: Comment: Filtering mitochondrial genes in DESEq results
6 days ago by bk11 ★ 1.2k
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1
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358
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Answer: Answer: GTF annotation file for Hg38 Dec 2013 (First Release)
7 days ago by bk11 ★ 1.2k
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227
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Comment: Comment: Deseq2
8 days ago by bk11 ★ 1.2k
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220
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Answer: Answer: How to split grouping information in a single expression matrix?
8 days ago by bk11 ★ 1.2k
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343
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Comment: Comment: Running Enrichr in python using a background gene list
9 days ago by bk11 ★ 1.2k
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343
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Answer: Answer: Running Enrichr in python using a background gene list
9 days ago by bk11 ★ 1.2k
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263
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Answer: Answer: Running python script in slurm using conda environment
9 days ago by bk11 ★ 1.2k
2
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267
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Answer: Answer: how to remove description from header?
9 days ago by bk11 ★ 1.2k
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181
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Comment: Comment: TCGAbiolinks MSI data
10 days ago by bk11 ★ 1.2k
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0
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428
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Answer: Answer: summarize consecutive columns over a data frame
10 days ago by bk11 ★ 1.2k
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212
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Answer: Answer: Choosing background for ORA using scrnaseq
10 days ago by bk11 ★ 1.2k
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232
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Comment: Comment: Michigan Imputation Server low reference overlap
10 days ago by bk11 ★ 1.2k
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1
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232
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Answer: Answer: Michigan Imputation Server low reference overlap
10 days ago by bk11 ★ 1.2k
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0
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516
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Comment: Comment: Is there a way to get a list of all homogygous sites for each sample with plink
12 days ago by bk11 ★ 1.2k
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1
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516
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Answer: Answer: Is there a way to get a list of all homogygous sites for each sample with plink
12 days ago by bk11 ★ 1.2k
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258
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Answer: Answer: Consensus Cluster takes normalized gene counts or raw gene counts?
13 days ago by bk11 ★ 1.2k
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1
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513
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Comment: Comment: How to get top 10 genes expressed in a cluster ( for cell type identification)?
13 days ago by bk11 ★ 1.2k
3
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263
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Answer: Answer: Could not view/find meta.data and Error merging three seurat object
14 days ago by bk11 ★ 1.2k
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1.0k
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Answer: Answer: How to limit fasta header to 40 characters?
15 days ago by bk11 ★ 1.2k
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0
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1.0k
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Comment: Comment: How to limit fasta header to 40 characters?
15 days ago by bk11 ★ 1.2k
1
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2
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539
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Comment: Comment: Help with error scanpy
15 days ago by bk11 ★ 1.2k
0
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0
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362
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Answer: Answer: GO annotation in R using library(org.Hs.eg.db)
15 days ago by bk11 ★ 1.2k
1
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0
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334
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Comment: Comment: Cluster annotation in single cell
15 days ago by bk11 ★ 1.2k
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0
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170
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Comment: Comment: Any online course for learning how to use PLINK?
15 days ago by bk11 ★ 1.2k
3
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1.0k
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Comment: Comment: How to limit fasta header to 40 characters?
16 days ago by bk11 ★ 1.2k
2
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1
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1.0k
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Answer: Answer: How to limit fasta header to 40 characters?
16 days ago by bk11 ★ 1.2k
2
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0
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303
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Answer: Answer: About scdbfinder
16 days ago by bk11 ★ 1.2k
4
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1
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340
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Answer: Answer: How to calculate GC content of reads that mapped to a specific gene?
20 days ago by bk11 ★ 1.2k
0
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0
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443
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Comment: Comment: The effect of SNPs at the same location
20 days ago by bk11 ★ 1.2k
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1
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443
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Comment: Comment: The effect of SNPs at the same location
20 days ago by bk11 ★ 1.2k
1
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1
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679
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Answer: Answer: R based query about making pairwise matrix
20 days ago by bk11 ★ 1.2k
0
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0
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294
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Comment: Comment: Why Beagle v5.4 fails during phasing large genotypic data set?
21 days ago by bk11 ★ 1.2k
1
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1
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656
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Comment: Comment: Help with Error: Required version of NumPy not available: installation of Numpy
21 days ago by bk11 ★ 1.2k
1
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1
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656
views
Comment: Comment: Help with Error: Required version of NumPy not available: installation of Numpy
updated 21 days ago by 40k • written 21 days ago by ★ 1.2k
1
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1
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656
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Comment: Comment: Help with Error: Required version of NumPy not available: installation of Numpy
updated 21 days ago by 40k • written 21 days ago by ★ 1.2k
2
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2
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656
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Answer: Answer: Help with Error: Required version of NumPy not available: installation of Numpy
21 days ago by bk11 ★ 1.2k
1
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0
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2.8k
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Comment: Comment: Reproduce the article "The complete sequence of a human genome."
21 days ago by bk11 ★ 1.2k
1
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0
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2.8k
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Comment: Comment: Reproduce the article "The complete sequence of a human genome."
21 days ago by bk11 ★ 1.2k
0
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1
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507
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Answer: Answer: CellRanger output more cells than specified using --force-cells? Why?
21 days ago by bk11 ★ 1.2k
1
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1
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370
views
Comment: Comment: How to understand if a GWAS sample comes from Chromosome X or Y
21 days ago by bk11 ★ 1.2k
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