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Comment: Comment: How to get the reference panel for UKBB
18 months ago by bk11 ★ 3.1k
3
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1
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1.5k
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Answer: Answer: How to filter columns in a raw sparse matrix in R
18 months ago by bk11 ★ 3.1k
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0
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2.1k
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Comment: Comment: Rename multiple fastq.gz files
18 months ago by bk11 ★ 3.1k
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1
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2.1k
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Comment: Comment: Rename multiple fastq.gz files
18 months ago by bk11 ★ 3.1k
1
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1
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2.1k
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Answer: Answer: Rename multiple fastq.gz files
18 months ago by bk11 ★ 3.1k
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0
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1.0k
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Comment: Comment: How to get the reference panel sites for TOPMed hg37 and 38
18 months ago by bk11 ★ 3.1k
2
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0
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1.7k
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Answer: Answer: convert h5ad to rds
19 months ago by bk11 ★ 3.1k
0
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0
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2.2k
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Comment: Comment: 99.9999% of Q30 bases is normal?
19 months ago by bk11 ★ 3.1k
2
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1
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1.0k
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Comment: Comment: Addmetadata to seurat obj
19 months ago by bk11 ★ 3.1k
1
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1
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873
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Comment: Comment: convert a seurat object to expressionset
19 months ago by bk11 ★ 3.1k
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1
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2.7k
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
19 months ago by bk11 ★ 3.1k
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0
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1.2k
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Comment: Comment: Cell type classification using an integrated reference
19 months ago by bk11 ★ 3.1k
0
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0
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707
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Answer: Answer: RNA-seq with normalized cpm count
19 months ago by bk11 ★ 3.1k
0
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1
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2.0k
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Answer: Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
19 months ago by bk11 ★ 3.1k
1
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1
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1.7k
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Answer: Answer: Seurat: CreateSeuratObject error, please help
20 months ago by bk11 ★ 3.1k
3
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0
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1.9k
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Answer: Answer: SHAPEIT5 phasing
20 months ago by bk11 ★ 3.1k
1
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1
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1.2k
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Comment: Comment: How to find what is the most significantly modulated gene in GEO2R analysis?
20 months ago by bk11 ★ 3.1k
0
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1
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921
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Answer: Answer: Converting SNP data table into .traw format or qtl (R) format
20 months ago by bk11 ★ 3.1k
1
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1
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2.2k
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Comment: Comment: ensembl - selecting SNPs of specific genes
20 months ago by bk11 ★ 3.1k
0
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1
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2.2k
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Comment: Comment: ensembl - selecting SNPs of specific genes
20 months ago by bk11 ★ 3.1k
1
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1
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2.2k
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Comment: Comment: ensembl - selecting SNPs of specific genes
20 months ago by bk11 ★ 3.1k
3
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1
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2.2k
views
Answer: Answer: ensembl - selecting SNPs of specific genes
21 months ago by bk11 ★ 3.1k
1
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0
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636
views
Answer: Answer: 1000 genome project specific genes selection
21 months ago by bk11 ★ 3.1k
0
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0
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2.1k
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Answer: Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
21 months ago by bk11 ★ 3.1k
0
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0
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608
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Comment: Comment: X chromosome inactivation
21 months ago by bk11 ★ 3.1k
0
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0
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825
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Answer: Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
21 months ago by bk11 ★ 3.1k
0
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0
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1.4k
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Comment: Comment: Need suggestions for ROC Curve in R
21 months ago by bk11 ★ 3.1k
0
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0
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636
views
Comment: Comment: CellPlex CMO highbackground
21 months ago by bk11 ★ 3.1k
0
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1
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1.6k
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Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
21 months ago by bk11 ★ 3.1k
0
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1
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1.6k
views
Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
21 months ago by bk11 ★ 3.1k
0
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1
reply
1.2k
views
Comment: Comment: How to choose --hwe threshold?
21 months ago by bk11 ★ 3.1k
1
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0
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1.3k
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Comment: Comment: Merge seurat list
21 months ago by bk11 ★ 3.1k
0
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0
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1000
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Comment: Comment: GO enrichment plot with dotplot strange axis
21 months ago by bk11 ★ 3.1k
1
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1
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1.3k
views
Answer: Answer: Merge seurat list
21 months ago by bk11 ★ 3.1k
0
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1
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1000
views
Comment: Comment: GO enrichment plot with dotplot strange axis
21 months ago by bk11 ★ 3.1k
2
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1
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1.2k
views
Answer: Answer: Splitting scRNA seq data from Multiome data(scRNA+ scATAC)
updated 21 months ago by 45k • written 21 months ago by ★ 3.1k
3
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1
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15k
views
Answer: Answer: Issues with Merging Seurat Objects: Multiple Counts in Assays Layer
21 months ago by bk11 ★ 3.1k
0
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1
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1.4k
views
Comment: Comment: How to find SNP locations in assemblies other than hg38
21 months ago by bk11 ★ 3.1k
1
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0
replies
847
views
Answer: Answer: Extract information of mapped reads bam files
21 months ago by bk11 ★ 3.1k
2
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1
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3.4k
views
Comment: Comment: Shrink logFC values after edgeR
21 months ago by bk11 ★ 3.1k
0
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0
replies
738
views
Comment: Comment: Is it possible to identify the strand of an RNA using UMI?
21 months ago by bk11 ★ 3.1k
0
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1
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1.8k
views
Comment: Comment: Does salmon work with combined short and long read bam file?
21 months ago by bk11 ★ 3.1k
0
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1
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1.4k
views
Comment: Comment: allele matching between identical genotypes
21 months ago by bk11 ★ 3.1k
0
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0
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563
views
Comment: Comment: EnhancedVolcanop plot using GSE data
21 months ago by bk11 ★ 3.1k
1
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1
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1.8k
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Comment: Comment: 1000G Reference Panel Hg38 Michigan Imputation Server
21 months ago by bk11 ★ 3.1k
2
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1
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2.1k
views
Comment: Comment: PCA plot interpretation (single population)
21 months ago by bk11 ★ 3.1k
0
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0
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778
views
Answer: Answer: Obtain rsID GWAS variants (9M)
21 months ago by bk11 ★ 3.1k
2
votes
0
replies
1.5k
views
Answer: Answer: Data scaling in single-cell RNAseq - sample-wise or on the full set?
21 months ago by bk11 ★ 3.1k
0
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1
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997
views
Comment: Comment: GEO Affymetrix data for differential expression analysis?
22 months ago by bk11 ★ 3.1k
1
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0
replies
1.1k
views
Comment: Comment: Transcript Based Annotation of Variants Using Annovar
22 months ago by bk11 ★ 3.1k
474 results • Page 3 of 10
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