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Comment: Comment: How to get the reference panel for UKBB
17 months ago by bk11 ★ 3.1k
3
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1
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1.4k
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Answer: Answer: How to filter columns in a raw sparse matrix in R
17 months ago by bk11 ★ 3.1k
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0
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1.9k
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Comment: Comment: Rename multiple fastq.gz files
17 months ago by bk11 ★ 3.1k
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1
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1.9k
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Comment: Comment: Rename multiple fastq.gz files
17 months ago by bk11 ★ 3.1k
1
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1
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1.9k
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Answer: Answer: Rename multiple fastq.gz files
17 months ago by bk11 ★ 3.1k
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0
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890
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Comment: Comment: How to get the reference panel sites for TOPMed hg37 and 38
17 months ago by bk11 ★ 3.1k
2
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0
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1.6k
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Answer: Answer: convert h5ad to rds
17 months ago by bk11 ★ 3.1k
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0
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2.0k
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Comment: Comment: 99.9999% of Q30 bases is normal?
17 months ago by bk11 ★ 3.1k
2
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1
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948
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Comment: Comment: Addmetadata to seurat obj
17 months ago by bk11 ★ 3.1k
1
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1
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779
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Comment: Comment: convert a seurat object to expressionset
17 months ago by bk11 ★ 3.1k
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1
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2.5k
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
17 months ago by bk11 ★ 3.1k
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0
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1.1k
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Comment: Comment: Cell type classification using an integrated reference
17 months ago by bk11 ★ 3.1k
0
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0
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608
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Answer: Answer: RNA-seq with normalized cpm count
18 months ago by bk11 ★ 3.1k
0
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1
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1.8k
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Answer: Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
18 months ago by bk11 ★ 3.1k
1
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1
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1.5k
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Answer: Answer: Seurat: CreateSeuratObject error, please help
18 months ago by bk11 ★ 3.1k
3
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0
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1.7k
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Answer: Answer: SHAPEIT5 phasing
18 months ago by bk11 ★ 3.1k
1
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1
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1.1k
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Comment: Comment: How to find what is the most significantly modulated gene in GEO2R analysis?
19 months ago by bk11 ★ 3.1k
0
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1
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840
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Answer: Answer: Converting SNP data table into .traw format or qtl (R) format
19 months ago by bk11 ★ 3.1k
1
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1
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2.0k
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Comment: Comment: ensembl - selecting SNPs of specific genes
19 months ago by bk11 ★ 3.1k
0
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1
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2.0k
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Comment: Comment: ensembl - selecting SNPs of specific genes
19 months ago by bk11 ★ 3.1k
1
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1
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2.0k
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Comment: Comment: ensembl - selecting SNPs of specific genes
19 months ago by bk11 ★ 3.1k
3
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1
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2.0k
views
Answer: Answer: ensembl - selecting SNPs of specific genes
19 months ago by bk11 ★ 3.1k
1
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0
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568
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Answer: Answer: 1000 genome project specific genes selection
19 months ago by bk11 ★ 3.1k
0
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0
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1.9k
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Answer: Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
19 months ago by bk11 ★ 3.1k
0
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0
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559
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Comment: Comment: X chromosome inactivation
19 months ago by bk11 ★ 3.1k
0
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0
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752
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Answer: Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
19 months ago by bk11 ★ 3.1k
0
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0
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1.3k
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Comment: Comment: Need suggestions for ROC Curve in R
19 months ago by bk11 ★ 3.1k
0
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0
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590
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Comment: Comment: CellPlex CMO highbackground
19 months ago by bk11 ★ 3.1k
0
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1
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1.4k
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Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
19 months ago by bk11 ★ 3.1k
0
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1
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1.4k
views
Comment: Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
19 months ago by bk11 ★ 3.1k
0
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1
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1.1k
views
Comment: Comment: How to choose --hwe threshold?
19 months ago by bk11 ★ 3.1k
1
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0
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1.2k
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Comment: Comment: Merge seurat list
19 months ago by bk11 ★ 3.1k
0
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0
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898
views
Comment: Comment: GO enrichment plot with dotplot strange axis
19 months ago by bk11 ★ 3.1k
1
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1
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1.2k
views
Answer: Answer: Merge seurat list
19 months ago by bk11 ★ 3.1k
0
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1
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898
views
Comment: Comment: GO enrichment plot with dotplot strange axis
19 months ago by bk11 ★ 3.1k
2
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1
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1.1k
views
Answer: Answer: Splitting scRNA seq data from Multiome data(scRNA+ scATAC)
updated 19 months ago by 45k • written 19 months ago by ★ 3.1k
3
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1
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13k
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Answer: Answer: Issues with Merging Seurat Objects: Multiple Counts in Assays Layer
19 months ago by bk11 ★ 3.1k
0
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1
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1.2k
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Comment: Comment: How to find SNP locations in assemblies other than hg38
19 months ago by bk11 ★ 3.1k
1
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0
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777
views
Answer: Answer: Extract information of mapped reads bam files
19 months ago by bk11 ★ 3.1k
2
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1
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3.1k
views
Comment: Comment: Shrink logFC values after edgeR
19 months ago by bk11 ★ 3.1k
0
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0
replies
671
views
Comment: Comment: Is it possible to identify the strand of an RNA using UMI?
19 months ago by bk11 ★ 3.1k
0
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1
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1.6k
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Comment: Comment: Does salmon work with combined short and long read bam file?
19 months ago by bk11 ★ 3.1k
0
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1
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1.3k
views
Comment: Comment: allele matching between identical genotypes
19 months ago by bk11 ★ 3.1k
0
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0
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511
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Comment: Comment: EnhancedVolcanop plot using GSE data
19 months ago by bk11 ★ 3.1k
1
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1
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1.5k
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Comment: Comment: 1000G Reference Panel Hg38 Michigan Imputation Server
19 months ago by bk11 ★ 3.1k
2
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1
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2.0k
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Comment: Comment: PCA plot interpretation (single population)
19 months ago by bk11 ★ 3.1k
0
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0
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705
views
Answer: Answer: Obtain rsID GWAS variants (9M)
19 months ago by bk11 ★ 3.1k
2
votes
0
replies
1.3k
views
Answer: Answer: Data scaling in single-cell RNAseq - sample-wise or on the full set?
19 months ago by bk11 ★ 3.1k
0
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1
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881
views
Comment: Comment: GEO Affymetrix data for differential expression analysis?
20 months ago by bk11 ★ 3.1k
1
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0
replies
1.0k
views
Comment: Comment: Transcript Based Annotation of Variants Using Annovar
20 months ago by bk11 ★ 3.1k
474 results • Page 3 of 10
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