Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
0
votes
0
replies
965
views
Answer: Answer: How to determine n and c terminal nucleotide bases from fasta sequences via R or
5 months ago by bk11 ★ 3.1k
0
votes
1
reply
1.3k
views
Answer: Answer: dittoHeatmap; adding column labels on the heatmap
7 months ago by bk11 ★ 3.1k
1
vote
1
reply
1.2k
views
Answer: Answer: Dealing with 2 different layers of counts within RNA assay in seurat
8 months ago by bk11 ★ 3.1k
0
votes
1
reply
557
views
Answer: Answer: Merging bfiles
8 months ago by bk11 ★ 3.1k
1
vote
0
replies
589
views
Answer: Answer: Best approach for identifying top proteins in a single cluster in single-cell an
8 months ago by bk11 ★ 3.1k
2
votes
0
replies
711
views
Answer: Answer: High inconsistency between edgeR and DESeq2
8 months ago by bk11 ★ 3.1k
0
votes
1
reply
948
views
Answer: Answer: Best practice for gene ontology/pathway/geneset enrichment in 10x data
9 months ago by bk11 ★ 3.1k
0
votes
0
replies
1.2k
views
Answer: Answer: Plink HWE QC question
9 months ago by bk11 ★ 3.1k
0
votes
0
replies
758
views
Answer: Answer: Enhanced Volcano not working on ANY data. Coerces everything to NaN
9 months ago by bk11 ★ 3.1k
2
votes
0
replies
781
views
Answer: Answer: Updating phenotype column for .ped .fam files (PLINK --pheno not working)
9 months ago by bk11 ★ 3.1k
0
votes
0
replies
1.5k
views
Answer: Answer: Remove part of a header in a fasta file
9 months ago by bk11 ★ 3.1k
1
vote
1
reply
694
views
Answer: Answer: Appending a Poly-A Tail to a Reference Transcriptome
10 months ago by bk11 ★ 3.1k
2
votes
1
reply
1.2k
views
Answer: Answer: Plotting LD heat map with plink.ld result
10 months ago by bk11 ★ 3.1k
1
vote
1
reply
533
views
Answer: Answer: Remove bacterial and protoza from Kraken2 EuPathDB
10 months ago by bk11 ★ 3.1k
2
votes
1
reply
1.8k
views
Answer: Answer: Can't increase font size for x axis
11 months ago by bk11 ★ 3.1k
0
votes
0
replies
3.8k
views
Answer: Answer: Good Bioinformatics Jokes/Puns?
11 months ago by bk11 ★ 3.1k
0
votes
1
reply
1.8k
views
Answer: Answer: Should I normalize and scale my data again after doing subset(seu, idents=" ") i
11 months ago by bk11 ★ 3.1k
2
votes
1
reply
1.3k
views
Answer: Answer: Histogram of normalized counts for each cell type
updated 11 months ago by 45k • written 11 months ago by ★ 3.1k
0
votes
1
reply
1.8k
views
Answer: Answer: Subset cells in Seurat data based on reads and gene expression
updated 11 months ago by 45k • written 12 months ago by ★ 3.1k
1
vote
1
reply
1.3k
views
Answer: Answer: Am I getting TPM correct from tcga?
updated 12 months ago by 45k • written 12 months ago by ★ 3.1k
2
votes
1
reply
1.0k
views
Answer: Answer: Consistent cluster coloring
12 months ago by bk11 ★ 3.1k
1
vote
1
reply
1.7k
views
Answer: Answer: Slot to pull data from for DoHeatmap
12 months ago by bk11 ★ 3.1k
1
vote
0
replies
676
views
Answer: Answer: MGI DNBelab C Series High-throughput Single-cell RNA Library Preparation Set V3.
12 months ago by bk11 ★ 3.1k
1
vote
0
replies
1.3k
views
Answer: Answer: Reading files from different types as H5AD
12 months ago by bk11 ★ 3.1k
1
vote
0
replies
872
views
Answer: Answer: Maximum bits in ggseqlogo is less then 2?
12 months ago by bk11 ★ 3.1k
2
votes
0
replies
1.6k
views
Answer: Answer: Seurat object with multiple PCAs/UMAPs from different assays
12 months ago by bk11 ★ 3.1k
2
votes
2
replies
2.0k
views
Answer: Answer: Is it possible to modify the gene names from the x-axis in Seurat::Dotplot?
12 months ago by bk11 ★ 3.1k
4
votes
1
reply
3.0k
views
Answer: Answer: Creating a Seurat object with Vissium public available data
12 months ago by bk11 ★ 3.1k
0
votes
0
replies
1.0k
views
Answer: Answer: enrichGO function produces NULL object
12 months ago by bk11 ★ 3.1k
1
vote
1
reply
2.1k
views
Answer: Answer: Mouse or Rat Gene Expression Data Similar to GTEx
12 months ago by bk11 ★ 3.1k
2
votes
0
replies
650
views
Answer: Answer: converting transcript IDs (Ensembl) to gene symbols in R
updated 13 months ago by 45k • written 13 months ago by ★ 3.1k
2
votes
2
replies
1.7k
views
Answer: Answer: GG Sankey plot
updated 12 months ago by 45k • written 13 months ago by ★ 3.1k
0
votes
0
replies
455
views
Answer: Answer: consensus sequence calling
13 months ago by bk11 ★ 3.1k
0
votes
0
replies
865
views
Answer: Answer: Splitting Seurat object by sample layers
updated 13 months ago by 45k • written 13 months ago by ★ 3.1k
3
votes
0
replies
893
views
Answer: Answer: visualize GSEA
13 months ago by bk11 ★ 3.1k
0
votes
1
reply
1.6k
views
Answer: Answer: Easy way to find out which allele is minor allele from bed file?
13 months ago by bk11 ★ 3.1k
1
vote
0
replies
660
views
Answer: Answer: Download eQTL data of one specific gene for all tissues from GTEx
13 months ago by bk11 ★ 3.1k
4
votes
0
replies
1.4k
views
Answer: Answer: Seurat merge and batch correction
updated 13 months ago by 45k • written 13 months ago by ★ 3.1k
3
votes
1
reply
1.1k
views
Answer: Answer: How to filter columns in a raw sparse matrix in R
14 months ago by bk11 ★ 3.1k
1
vote
1
reply
1.6k
views
Answer: Answer: Rename multiple fastq.gz files
14 months ago by bk11 ★ 3.1k
2
votes
0
replies
1.4k
views
Answer: Answer: convert h5ad to rds
14 months ago by bk11 ★ 3.1k
0
votes
0
replies
506
views
Answer: Answer: RNA-seq with normalized cpm count
14 months ago by bk11 ★ 3.1k
0
votes
1
reply
1.5k
views
Answer: Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
15 months ago by bk11 ★ 3.1k
1
vote
1
reply
1.3k
views
Answer: Answer: Seurat: CreateSeuratObject error, please help
15 months ago by bk11 ★ 3.1k
3
votes
0
replies
1.4k
views
Answer: Answer: SHAPEIT5 phasing
15 months ago by bk11 ★ 3.1k
0
votes
1
reply
733
views
Answer: Answer: Converting SNP data table into .traw format or qtl (R) format
16 months ago by bk11 ★ 3.1k
3
votes
1
reply
1.8k
views
Answer: Answer: ensembl - selecting SNPs of specific genes
16 months ago by bk11 ★ 3.1k
1
vote
0
replies
501
views
Answer: Answer: 1000 genome project specific genes selection
16 months ago by bk11 ★ 3.1k
0
votes
0
replies
1.5k
views
Answer: Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
16 months ago by bk11 ★ 3.1k
0
votes
0
replies
640
views
Answer: Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
16 months ago by bk11 ★ 3.1k
181 results • Page 1 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6