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Answer:
Answer: How to determine n and c terminal nucleotide bases from fasta sequences via R or
5 months ago by
bk11
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1.3k
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Answer:
Answer: dittoHeatmap; adding column labels on the heatmap
7 months ago by
bk11
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1.2k
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Answer:
Answer: Dealing with 2 different layers of counts within RNA assay in seurat
8 months ago by
bk11
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557
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Answer:
Answer: Merging bfiles
8 months ago by
bk11
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589
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Answer:
Answer: Best approach for identifying top proteins in a single cluster in single-cell an
8 months ago by
bk11
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2
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711
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Answer:
Answer: High inconsistency between edgeR and DESeq2
8 months ago by
bk11
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1
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948
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Answer:
Answer: Best practice for gene ontology/pathway/geneset enrichment in 10x data
9 months ago by
bk11
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0
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1.2k
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Answer:
Answer: Plink HWE QC question
9 months ago by
bk11
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0
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758
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Answer:
Answer: Enhanced Volcano not working on ANY data. Coerces everything to NaN
9 months ago by
bk11
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2
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0
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781
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Answer:
Answer: Updating phenotype column for .ped .fam files (PLINK --pheno not working)
9 months ago by
bk11
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1.5k
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Answer:
Answer: Remove part of a header in a fasta file
9 months ago by
bk11
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694
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Answer:
Answer: Appending a Poly-A Tail to a Reference Transcriptome
10 months ago by
bk11
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2
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1.2k
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Answer:
Answer: Plotting LD heat map with plink.ld result
10 months ago by
bk11
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533
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Answer:
Answer: Remove bacterial and protoza from Kraken2 EuPathDB
10 months ago by
bk11
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2
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1.8k
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Answer:
Answer: Can't increase font size for x axis
11 months ago by
bk11
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0
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3.8k
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Answer:
Answer: Good Bioinformatics Jokes/Puns?
11 months ago by
bk11
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1.8k
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Answer:
Answer: Should I normalize and scale my data again after doing subset(seu, idents=" ") i
11 months ago by
bk11
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2
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1.3k
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Answer:
Answer: Histogram of normalized counts for each cell type
updated 11 months ago by
Ram
45k • written 11 months ago by
bk11
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1
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1.8k
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Answer:
Answer: Subset cells in Seurat data based on reads and gene expression
updated 11 months ago by
Ram
45k • written 12 months ago by
bk11
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1
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1
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1.3k
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Answer:
Answer: Am I getting TPM correct from tcga?
updated 12 months ago by
Ram
45k • written 12 months ago by
bk11
★ 3.1k
2
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1
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1.0k
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Answer:
Answer: Consistent cluster coloring
12 months ago by
bk11
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1.7k
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Answer:
Answer: Slot to pull data from for DoHeatmap
12 months ago by
bk11
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0
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676
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Answer:
Answer: MGI DNBelab C Series High-throughput Single-cell RNA Library Preparation Set V3.
12 months ago by
bk11
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0
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1.3k
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Answer:
Answer: Reading files from different types as H5AD
12 months ago by
bk11
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0
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872
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Answer:
Answer: Maximum bits in ggseqlogo is less then 2?
12 months ago by
bk11
★ 3.1k
2
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0
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1.6k
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Answer:
Answer: Seurat object with multiple PCAs/UMAPs from different assays
12 months ago by
bk11
★ 3.1k
2
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2
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2.0k
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Answer:
Answer: Is it possible to modify the gene names from the x-axis in Seurat::Dotplot?
12 months ago by
bk11
★ 3.1k
4
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1
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3.0k
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Answer:
Answer: Creating a Seurat object with Vissium public available data
12 months ago by
bk11
★ 3.1k
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0
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1.0k
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Answer:
Answer: enrichGO function produces NULL object
12 months ago by
bk11
★ 3.1k
1
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1
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2.1k
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Answer:
Answer: Mouse or Rat Gene Expression Data Similar to GTEx
12 months ago by
bk11
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2
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0
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650
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Answer:
Answer: converting transcript IDs (Ensembl) to gene symbols in R
updated 13 months ago by
Ram
45k • written 13 months ago by
bk11
★ 3.1k
2
votes
2
replies
1.7k
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Answer:
Answer: GG Sankey plot
updated 12 months ago by
Ram
45k • written 13 months ago by
bk11
★ 3.1k
0
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0
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455
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Answer:
Answer: consensus sequence calling
13 months ago by
bk11
★ 3.1k
0
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0
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865
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Answer:
Answer: Splitting Seurat object by sample layers
updated 13 months ago by
Ram
45k • written 13 months ago by
bk11
★ 3.1k
3
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0
replies
893
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Answer:
Answer: visualize GSEA
13 months ago by
bk11
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0
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1
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1.6k
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Answer:
Answer: Easy way to find out which allele is minor allele from bed file?
13 months ago by
bk11
★ 3.1k
1
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0
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660
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Answer:
Answer: Download eQTL data of one specific gene for all tissues from GTEx
13 months ago by
bk11
★ 3.1k
4
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0
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1.4k
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Answer:
Answer: Seurat merge and batch correction
updated 13 months ago by
Ram
45k • written 13 months ago by
bk11
★ 3.1k
3
votes
1
reply
1.1k
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Answer:
Answer: How to filter columns in a raw sparse matrix in R
14 months ago by
bk11
★ 3.1k
1
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1
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1.6k
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Answer:
Answer: Rename multiple fastq.gz files
14 months ago by
bk11
★ 3.1k
2
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0
replies
1.4k
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Answer:
Answer: convert h5ad to rds
14 months ago by
bk11
★ 3.1k
0
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0
replies
506
views
Answer:
Answer: RNA-seq with normalized cpm count
14 months ago by
bk11
★ 3.1k
0
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1
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1.5k
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Answer:
Answer: 'Invalid parameter' error to generate a count matrix using featurecounts
15 months ago by
bk11
★ 3.1k
1
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1
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1.3k
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Answer:
Answer: Seurat: CreateSeuratObject error, please help
15 months ago by
bk11
★ 3.1k
3
votes
0
replies
1.4k
views
Answer:
Answer: SHAPEIT5 phasing
15 months ago by
bk11
★ 3.1k
0
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1
reply
733
views
Answer:
Answer: Converting SNP data table into .traw format or qtl (R) format
16 months ago by
bk11
★ 3.1k
3
votes
1
reply
1.8k
views
Answer:
Answer: ensembl - selecting SNPs of specific genes
16 months ago by
bk11
★ 3.1k
1
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0
replies
501
views
Answer:
Answer: 1000 genome project specific genes selection
16 months ago by
bk11
★ 3.1k
0
votes
0
replies
1.5k
views
Answer:
Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
16 months ago by
bk11
★ 3.1k
0
votes
0
replies
640
views
Answer:
Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
16 months ago by
bk11
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