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Comment: Comment: counting from a single BAM file with multiple samples
7 months ago by bk11 ★ 2.4k
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1.3k
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Comment: Comment: Help with error running velocyto
7 months ago by bk11 ★ 2.4k
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1.3k
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Comment: Comment: Help with error running velocyto
7 months ago by bk11 ★ 2.4k
2
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1.3k
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Answer: Answer: Help with error running velocyto
7 months ago by bk11 ★ 2.4k
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1.2k
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Comment: Comment: How to get the gft file to run velocyto for velocity analysis?
7 months ago by bk11 ★ 2.4k
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1.1k
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Answer: Answer: Search RCSB with a list of protein names?
7 months ago by bk11 ★ 2.4k
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1
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663
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Comment: Comment: QC of genetic data
7 months ago by bk11 ★ 2.4k
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599
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Comment: Comment: Quality Control of VCFs that used different genotyping arrays
7 months ago by bk11 ★ 2.4k
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691
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Comment: Comment: Subclustering of intergated cells from scRNA-seq data
7 months ago by bk11 ★ 2.4k
2
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547
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Answer: Answer: Imputation server failing to see samples in VCF files
7 months ago by bk11 ★ 2.4k
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459
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Comment: Comment: Issue with merging in plink and eigensoft.
7 months ago by bk11 ★ 2.4k
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2.3k
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Comment: Comment: Clustering in single cell
7 months ago by bk11 ★ 2.4k
3
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1
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1.4k
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Answer: Answer: How to convert data in r?
updated 7 months ago by 43k • written 7 months ago by ★ 2.4k
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1
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1.9k
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Answer: Answer: Converting hdf5 file to loom file
7 months ago by bk11 ★ 2.4k
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572
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Comment: Comment: comparision of umap single cell
7 months ago by bk11 ★ 2.4k
2
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1.2k
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Comment: Comment: How to filter vcf file by MAF using bcftools?
7 months ago by bk11 ★ 2.4k
0
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2
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1.2k
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Comment: Comment: How to filter vcf file by MAF using bcftools?
7 months ago by bk11 ★ 2.4k
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1.0k
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Comment: Comment: Number of accessible regions included by DESeq2 to generate the PCA plot with th
7 months ago by bk11 ★ 2.4k
0
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1
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711
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Comment: Comment: Detect STRs in illumina library
7 months ago by bk11 ★ 2.4k
0
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947
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Comment: Comment: Violin plot (Monocle 3) - Troubleshooting
7 months ago by bk11 ★ 2.4k
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1
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2.0k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bk11 ★ 2.4k
0
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1
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947
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Comment: Comment: Violin plot (Monocle 3) - Troubleshooting
7 months ago by bk11 ★ 2.4k
0
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1
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2.0k
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Comment: Comment: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bk11 ★ 2.4k
0
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1
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2.0k
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Answer: Answer: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bk11 ★ 2.4k
0
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1
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947
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Answer: Answer: Violin plot (Monocle 3) - Troubleshooting
updated 7 months ago by 43k • written 7 months ago by ★ 2.4k
1
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1
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523
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Answer: Answer: miRDeep2 - identifying miRNAs from deep sequencing data
7 months ago by bk11 ★ 2.4k
0
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0
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672
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Comment: Comment: Identifying common DEGs among multiple datasets
7 months ago by bk11 ★ 2.4k
1
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1
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950
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Answer: Answer: How to display all top markers in the heatmap by DoHeatmap (Seurat) when there a
updated 7 months ago by 43k • written 7 months ago by ★ 2.4k
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1
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1.5k
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Comment: Comment: Inflated GWAS test statistic after merging multiple batches of genotype dataset
7 months ago by bk11 ★ 2.4k
0
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1
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1.5k
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Answer: Answer: Inflated GWAS test statistic after merging multiple batches of genotype dataset
7 months ago by bk11 ★ 2.4k
0
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0
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727
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Comment: Comment: Generate a fraction of immune cell between two condition from single cell RNAseq
7 months ago by bk11 ★ 2.4k
0
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0
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1.1k
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Answer: Answer: differential gene expression analysis comparing different conditions using scRNA
8 months ago by bk11 ★ 2.4k
3
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0
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416
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Answer: Answer: Automatic Cluster Annotation to the subsets of immune cells
8 months ago by bk11 ★ 2.4k
1
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1
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468
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Comment: Comment: Multiple testing adjustment for stepwise model selection
8 months ago by bk11 ★ 2.4k
0
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1
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733
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Answer: Answer: Data Import Issue detectRUNS R
8 months ago by bk11 ★ 2.4k
0
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1
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733
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Comment: Comment: Data Import Issue detectRUNS R
8 months ago by bk11 ★ 2.4k
0
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0
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778
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Comment: Comment: Filtering mitochondrial genes in DESEq results
8 months ago by bk11 ★ 2.4k
0
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1
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801
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Answer: Answer: GTF annotation file for Hg38 Dec 2013 (First Release)
8 months ago by bk11 ★ 2.4k
0
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0
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469
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Comment: Comment: Deseq2
8 months ago by bk11 ★ 2.4k
2
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1
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459
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Answer: Answer: How to split grouping information in a single expression matrix?
8 months ago by bk11 ★ 2.4k
0
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1
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830
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Comment: Comment: Running Enrichr in python using a background gene list
8 months ago by bk11 ★ 2.4k
0
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1
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830
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Answer: Answer: Running Enrichr in python using a background gene list
8 months ago by bk11 ★ 2.4k
2
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0
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3.3k
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Answer: Answer: Running python script in slurm using conda environment
8 months ago by bk11 ★ 2.4k
2
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0
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530
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Answer: Answer: how to remove description from header?
8 months ago by bk11 ★ 2.4k
0
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0
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403
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Comment: Comment: TCGAbiolinks MSI data
8 months ago by bk11 ★ 2.4k
1
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0
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882
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Answer: Answer: summarize consecutive columns over a data frame
updated 7 months ago by 43k • written 8 months ago by ★ 2.4k
0
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0
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498
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Answer: Answer: Choosing background for ORA using scrnaseq
8 months ago by bk11 ★ 2.4k
0
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0
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636
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Comment: Comment: Michigan Imputation Server low reference overlap
8 months ago by bk11 ★ 2.4k
0
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1
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636
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Answer: Answer: Michigan Imputation Server low reference overlap
8 months ago by bk11 ★ 2.4k
0
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0
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1.2k
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Comment: Comment: Is there a way to get a list of all homogygous sites for each sample with plink
8 months ago by bk11 ★ 2.4k
400 results • Page 4 of 8
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