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Answer: Answer: Validation of somatic variant calling pipeline
4.2 years ago by Kevin Blighe 89k
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2.7k
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Answer: Answer: [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version],
4.2 years ago by Kevin Blighe 89k
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Comment: Comment: DESeq2 rlog-transformed RNA-seq data for machine learning input
4.2 years ago by Kevin Blighe 89k
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2.1k
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Comment: Comment: GSE28955 - Agilent-016436 Human miRNA Microarray 1.0
4.2 years ago by Kevin Blighe 89k
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1.8k
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Comment: Comment: getting paired end datasets from SRA
4.2 years ago by Kevin Blighe 89k
6
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Tutorial: GSE28955 - Agilent-016436 Human miRNA Microarray 1.0
limma GPL6955 Microarray miRNA Agilent
4.2 years ago by Kevin Blighe 89k
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9.0k
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Comment: Comment: GSVA R packages
4.3 years ago by Kevin Blighe 89k
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2.3k
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Comment: Comment: microarray miRNA expression data analysis
4.3 years ago by Kevin Blighe 89k
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3.6k
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Comment: Comment: Read group info
4.3 years ago by Kevin Blighe 89k
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1.2k
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Comment: Comment: some values in assay are negative
4.3 years ago by Kevin Blighe 89k
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2.3k
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Comment: Comment: microarray miRNA expression data analysis
4.3 years ago by Kevin Blighe 89k
1
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2.3k
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Comment: Comment: microarray miRNA expression data analysis
4.3 years ago by Kevin Blighe 89k
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1
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2.3k
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Answer: Answer: microarray miRNA expression data analysis
4.3 years ago by Kevin Blighe 89k
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1
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3.3k
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Comment: Comment: Bioperl SeqIO.pm cannot be found
4.3 years ago by Kevin Blighe 89k
1
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1
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3.3k
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Answer: Answer: Bioperl SeqIO.pm cannot be found
4.3 years ago by Kevin Blighe 89k
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1.2k
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Comment: Comment: Normalizing 5' Nascent RNA-seq data to identify differentially expressed transcr
4.3 years ago by Kevin Blighe 89k
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2
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2.5k
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Comment: Comment: Merge files in Plink
4.3 years ago by Kevin Blighe 89k
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2.9k
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Comment: Comment: How to check which genes affect a continuous phenotype
4.3 years ago by Kevin Blighe 89k
3
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2
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2.3k
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Answer: Answer: AnnotationHub::mapIds() cannot find existing ENSG (GEO supplemental data cross-r
4.3 years ago by Kevin Blighe 89k
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1
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5.3k
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Comment: Comment: plotting AF in vcf files
4.3 years ago by Kevin Blighe 89k
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1.3k
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Answer: Answer: Extremely low number of variants in VCF file after filtering MIN(FORMAT/DP)>10
4.3 years ago by Kevin Blighe 89k
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1
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13k
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Comment: Comment: Where To Find Annotation File For Agilent Microarray?
4.3 years ago by Kevin Blighe 89k
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1
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13k
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Comment: Comment: Where To Find Annotation File For Agilent Microarray?
4.3 years ago by Kevin Blighe 89k
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2.5k
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Comment: Comment: Can RNA-Seq be used for TMB calculation?
4.3 years ago by Kevin Blighe 89k
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1
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13k
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Comment: Comment: Where To Find Annotation File For Agilent Microarray?
4.3 years ago by Kevin Blighe 89k
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1
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6.5k
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Comment: Comment: library(Seurat) shows error: package or namespace load failed for ‘Seurat’ in .d
4.3 years ago by Kevin Blighe 89k
1
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1
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1.4k
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Answer: Answer: How to perform DESEQ2 analysis when there are three treatments (one of them bein
4.3 years ago by Kevin Blighe 89k
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4.4k
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Comment: Comment: Help with Volcano plot
4.3 years ago by Kevin Blighe 89k
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3.0k
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Comment: Comment: analyzing cel files
4.3 years ago by Kevin Blighe 89k
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1
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3.7k
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Comment: Comment: Why do I still have missing values in my gene list, even after cooksCutoff and i
4.3 years ago by Kevin Blighe 89k
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1
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3.7k
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Comment: Comment: Why do I still have missing values in my gene list, even after cooksCutoff and i
4.3 years ago by Kevin Blighe 89k
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7.3k
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Comment: Comment: EnhancedVolcano questions on parameters, arguments can set
4.3 years ago by Kevin Blighe 89k
1
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6.0k
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Comment: Comment: genotype imputation pipeline
4.3 years ago by Kevin Blighe 89k
0
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1
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4.4k
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Comment: Comment: Help with Volcano plot
4.3 years ago by Kevin Blighe 89k
0
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0
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4.4k
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Comment: Comment: Help with Volcano plot
4.3 years ago by Kevin Blighe 89k
1
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1
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5.5k
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Comment: Comment: How do I compute ld blocks from the hapmap ld_data?
4.3 years ago by Kevin Blighe 89k
0
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7.7k
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Comment: Comment: Annotation Affymetrix probesets to Gene symbols
4.3 years ago by Kevin Blighe 89k
3
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1
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5.4k
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Tutorial: Affymetrix HTA 2.0 id conversion
biomart HTA affymetrix Affymetrix 2.0
updated 21 months ago by ▴ 120 • written 4.3 years ago by 89k
0
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7.9k
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Comment: Comment: inquiry related to snpsift
4.3 years ago by Kevin Blighe 89k
1
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1
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2.5k
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Comment: Comment: How to compare LD of a gene for all subpopulations in 1000 Genome?
4.3 years ago by Kevin Blighe 89k
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1
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2.5k
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Answer: Answer: How to compare LD of a gene for all subpopulations in 1000 Genome?
4.3 years ago by Kevin Blighe 89k
1
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0
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5.8k
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Comment: Comment: WGCNA adjust p value
4.3 years ago by Kevin Blighe 89k
1
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0
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2.3k
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Answer: Answer: R package for filtering expression data
4.3 years ago by Kevin Blighe 89k
1
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1
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8.3k
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Comment: Comment: Bcftools how to add DP to FORMAT field (get per sample read depth for REF vs AL
4.3 years ago by Kevin Blighe 89k
0
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1
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7.9k
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Comment: Comment: inquiry related to snpsift
4.3 years ago by Kevin Blighe 89k
0
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0
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1.5k
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Comment: Comment: Parsing issues with single cell file from GEO
4.3 years ago by Kevin Blighe 89k
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1
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6.7k
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Answer: Answer: K-means for RNA seq gene clustering
4.3 years ago by Kevin Blighe 89k
0
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1
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7.9k
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Comment: Comment: inquiry related to snpsift
4.3 years ago by Kevin Blighe 89k
0
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1
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7.9k
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Comment: Comment: inquiry related to snpsift
4.3 years ago by Kevin Blighe 89k
0
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1
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7.9k
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Comment: Comment: inquiry related to snpsift
4.3 years ago by Kevin Blighe 89k
9,959 results • Page 12 of 200
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