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Comment:
Comment: Automated dbSNP lookup by rsID position, plus genome build liftover
2.7 years ago by
Kevin Blighe
89k
0
votes
0
replies
980
views
Answer:
Answer: What is read depth exactly?
2.7 years ago by
Kevin Blighe
89k
0
votes
0
replies
888
views
Comment:
Comment: differential expression analysis
2.7 years ago by
Kevin Blighe
89k
1
vote
1
reply
5.1k
views
Answer:
Answer: What are Differentially Expressed Genes ?!!
2.7 years ago by
Kevin Blighe
89k
0
votes
0
replies
1.1k
views
Answer:
Answer: Calculating Log of the odds (LOD)
2.8 years ago by
Kevin Blighe
89k
3
votes
1
reply
1.4k
views
Answer:
Answer: installation of bioclite gives an error
updated 2.5 years ago by
Ram
45k • written 2.8 years ago by
Kevin Blighe
89k
0
votes
1
reply
29k
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Comment:
Comment: How to extract the list of genes from TCGA CNV data
2.8 years ago by
Kevin Blighe
89k
0
votes
0
replies
1.2k
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Answer:
Answer: R install BiocManager
2.9 years ago by
Kevin Blighe
89k
0
votes
0
replies
12k
views
Comment:
Comment: WGCNA pearson or bicor? Also, should I adjust module correlation Pvalues by Bonf
2.9 years ago by
Kevin Blighe
89k
0
votes
0
replies
1.5k
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Comment:
Comment: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
2.9 years ago by
Kevin Blighe
89k
2
votes
1
reply
1.5k
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Answer:
Answer: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
2.9 years ago by
Kevin Blighe
89k
0
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0
replies
11k
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Comment:
Comment: Predicting survival of cancer patients using glmnet cox
2.9 years ago by
Kevin Blighe
89k
77
votes
60
replies
34k
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16 follow
Tutorial:
Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
1000genomes
PLINK
PCA
VCF
updated 2.7 years ago by
Ram
45k • written 8.2 years ago by
Kevin Blighe
89k
0
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0
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23k
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Comment:
Comment: ENSMUSG number convert to gene name
3.0 years ago by
Kevin Blighe
89k
1
vote
0
replies
1.5k
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Comment:
Comment: Animation of EnhancedVolcano?
3.0 years ago by
Kevin Blighe
89k
1
vote
1
reply
2.2k
views
Answer:
Answer: How can I convert -log10 (p-value) to p-value?
3.0 years ago by
Kevin Blighe
89k
1
vote
1
reply
1.5k
views
Answer:
Answer: How to deal with "///" in between gene symbols?
3.0 years ago by
Kevin Blighe
89k
0
votes
0
replies
1.3k
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Comment:
Comment: Retrieve all reviewed proteins from a list of species names
3.0 years ago by
Kevin Blighe
89k
1
vote
0
replies
6.7k
views
Comment:
Comment: Use padj instead of p-value to ploting DE genes using EnhancedVolcano
3.0 years ago by
Kevin Blighe
89k
1
vote
0
replies
3.0k
views
Answer:
Answer: Availability of pre-ensembl information in biomart
3.0 years ago by
Kevin Blighe
89k
0
votes
0
replies
1.7k
views
Comment:
Comment: RNA-Seq Reads Count
3.0 years ago by
Kevin Blighe
89k
2
votes
1
reply
5.0k
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Answer:
Answer: reduce space between X-axis ticks
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
3.6k
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Comment:
Comment: R lags error
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
951
views
Answer:
Answer: RNA-seq dataset of experiment and control group of TARGET-ALL project in TCGA po
3.1 years ago by
Kevin Blighe
89k
2
votes
1
reply
67k
views
Comment:
Comment: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
67k
views
Comment:
Comment: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
3.1 years ago by
Kevin Blighe
89k
0
votes
0
replies
2.0k
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Comment:
Comment: Pattern match using R Biostrings
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
2.0k
views
Comment:
Comment: Pattern match using R Biostrings
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
1.4k
views
Comment:
Comment: Basic PRS question
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
1.4k
views
Answer:
Answer: Basic PRS question
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
3.7k
views
Comment:
Comment: microarray analysis in R
3.1 years ago by
Kevin Blighe
89k
0
votes
2
replies
3.7k
views
Comment:
Comment: microarray analysis in R
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
3.7k
views
Comment:
Comment: microarray analysis in R
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
1.8k
views
Comment:
Comment: converting probes robes to gene IDs
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
3.7k
views
Comment:
Comment: microarray analysis in R
3.1 years ago by
Kevin Blighe
89k
0
votes
0
replies
1.8k
views
Answer:
Answer: converting probes robes to gene IDs
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
3.7k
views
Comment:
Comment: microarray analysis in R
3.1 years ago by
Kevin Blighe
89k
0
votes
0
replies
3.7k
views
Comment:
Comment: microarray analysis in R
3.1 years ago by
Kevin Blighe
89k
0
votes
2
replies
3.7k
views
Answer:
Answer: microarray analysis in R
3.1 years ago by
Kevin Blighe
89k
0
votes
0
replies
2.2k
views
Comment:
Comment: Command to insert column with text according to specific text in another column
3.1 years ago by
Kevin Blighe
89k
2
votes
1
reply
2.2k
views
Answer:
Answer: Command to insert column with text according to specific text in another column
3.1 years ago by
Kevin Blighe
89k
0
votes
0
replies
16k
views
Comment:
Comment: Why is 0/0 homozygous reference call in VCF useful information?
3.1 years ago by
Kevin Blighe
89k
0
votes
1
reply
1.7k
views
Comment:
Comment: Find top genes that correlate with my gene of interest using TCGA RNA-Seq data a
3.1 years ago by
Kevin Blighe
89k
0
votes
2
replies
1.7k
views
Answer:
Answer: Find top genes that correlate with my gene of interest using TCGA RNA-Seq data a
3.1 years ago by
Kevin Blighe
89k
1
vote
0
replies
41k
views
Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by
Kevin Blighe
89k
1
vote
0
replies
41k
views
Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by
Kevin Blighe
89k
0
votes
1
reply
41k
views
Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by
Kevin Blighe
89k
1
vote
2
replies
41k
views
Comment:
Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by
Kevin Blighe
89k
0
votes
0
replies
4.9k
views
Comment:
Comment: PCAtools data file not linking to metadata file
3.2 years ago by
Kevin Blighe
89k
2
votes
1
reply
2.4k
views
Comment:
Comment: How to calculate if statistically a variable of a bulk RNA-seq affects the compa
3.2 years ago by
Kevin Blighe
89k
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