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Comment: Comment: Automated dbSNP lookup by rsID position, plus genome build liftover
2.7 years ago by Kevin Blighe 89k
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980
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Answer: Answer: What is read depth exactly?
2.7 years ago by Kevin Blighe 89k
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888
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Comment: Comment: differential expression analysis
2.7 years ago by Kevin Blighe 89k
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Answer: Answer: What are Differentially Expressed Genes ?!!
2.7 years ago by Kevin Blighe 89k
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1.1k
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Answer: Answer: Calculating Log of the odds (LOD)
2.8 years ago by Kevin Blighe 89k
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1.4k
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Answer: Answer: installation of bioclite gives an error
updated 2.5 years ago by 45k • written 2.8 years ago by 89k
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Comment: Comment: How to extract the list of genes from TCGA CNV data
2.8 years ago by Kevin Blighe 89k
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1.2k
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Answer: Answer: R install BiocManager
2.9 years ago by Kevin Blighe 89k
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12k
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Comment: Comment: WGCNA pearson or bicor? Also, should I adjust module correlation Pvalues by Bonf
2.9 years ago by Kevin Blighe 89k
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1.5k
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Comment: Comment: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
2.9 years ago by Kevin Blighe 89k
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1.5k
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Answer: Answer: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
2.9 years ago by Kevin Blighe 89k
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11k
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Comment: Comment: Predicting survival of cancer patients using glmnet cox
2.9 years ago by Kevin Blighe 89k
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60
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16 follow
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
1000genomes PLINK PCA VCF
updated 2.7 years ago by 45k • written 8.2 years ago by 89k
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23k
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Comment: Comment: ENSMUSG number convert to gene name
3.0 years ago by Kevin Blighe 89k
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1.5k
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Comment: Comment: Animation of EnhancedVolcano?
3.0 years ago by Kevin Blighe 89k
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2.2k
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Answer: Answer: How can I convert -log10 (p-value) to p-value?
3.0 years ago by Kevin Blighe 89k
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1.5k
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Answer: Answer: How to deal with "///" in between gene symbols?
3.0 years ago by Kevin Blighe 89k
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1.3k
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Comment: Comment: Retrieve all reviewed proteins from a list of species names
3.0 years ago by Kevin Blighe 89k
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Comment: Comment: Use padj instead of p-value to ploting DE genes using EnhancedVolcano
3.0 years ago by Kevin Blighe 89k
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Answer: Answer: Availability of pre-ensembl information in biomart
3.0 years ago by Kevin Blighe 89k
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1.7k
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Comment: Comment: RNA-Seq Reads Count
3.0 years ago by Kevin Blighe 89k
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Answer: Answer: reduce space between X-axis ticks
3.1 years ago by Kevin Blighe 89k
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3.6k
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Comment: Comment: R lags error
3.1 years ago by Kevin Blighe 89k
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1
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951
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Answer: Answer: RNA-seq dataset of experiment and control group of TARGET-ALL project in TCGA po
3.1 years ago by Kevin Blighe 89k
2
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1
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67k
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Comment: Comment: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
3.1 years ago by Kevin Blighe 89k
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1
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67k
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Comment: Comment: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
3.1 years ago by Kevin Blighe 89k
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2.0k
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Comment: Comment: Pattern match using R Biostrings
3.1 years ago by Kevin Blighe 89k
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1
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2.0k
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Comment: Comment: Pattern match using R Biostrings
3.1 years ago by Kevin Blighe 89k
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1
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1.4k
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Comment: Comment: Basic PRS question
3.1 years ago by Kevin Blighe 89k
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1
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1.4k
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Answer: Answer: Basic PRS question
3.1 years ago by Kevin Blighe 89k
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1
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3.7k
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Comment: Comment: microarray analysis in R
3.1 years ago by Kevin Blighe 89k
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3.7k
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Comment: Comment: microarray analysis in R
3.1 years ago by Kevin Blighe 89k
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1
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3.7k
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Comment: Comment: microarray analysis in R
3.1 years ago by Kevin Blighe 89k
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1
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1.8k
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Comment: Comment: converting probes robes to gene IDs
3.1 years ago by Kevin Blighe 89k
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3.7k
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Comment: Comment: microarray analysis in R
3.1 years ago by Kevin Blighe 89k
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Answer: Answer: converting probes robes to gene IDs
3.1 years ago by Kevin Blighe 89k
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3.7k
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Comment: Comment: microarray analysis in R
3.1 years ago by Kevin Blighe 89k
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3.7k
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Comment: Comment: microarray analysis in R
3.1 years ago by Kevin Blighe 89k
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2
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3.7k
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Answer: Answer: microarray analysis in R
3.1 years ago by Kevin Blighe 89k
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2.2k
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Comment: Comment: Command to insert column with text according to specific text in another column
3.1 years ago by Kevin Blighe 89k
2
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1
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2.2k
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Answer: Answer: Command to insert column with text according to specific text in another column
3.1 years ago by Kevin Blighe 89k
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0
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16k
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Comment: Comment: Why is 0/0 homozygous reference call in VCF useful information?
3.1 years ago by Kevin Blighe 89k
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1
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1.7k
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Comment: Comment: Find top genes that correlate with my gene of interest using TCGA RNA-Seq data a
3.1 years ago by Kevin Blighe 89k
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2
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Answer: Answer: Find top genes that correlate with my gene of interest using TCGA RNA-Seq data a
3.1 years ago by Kevin Blighe 89k
1
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0
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41k
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Comment: Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by Kevin Blighe 89k
1
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41k
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Comment: Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by Kevin Blighe 89k
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41k
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Comment: Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by Kevin Blighe 89k
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2
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41k
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Comment: Comment: EnhancedVolcano: Publication-ready volcano plots with enhanced colouring and lab
3.2 years ago by Kevin Blighe 89k
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4.9k
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Comment: Comment: PCAtools data file not linking to metadata file
3.2 years ago by Kevin Blighe 89k
2
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1
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2.4k
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Comment: Comment: How to calculate if statistically a variable of a bulk RNA-seq affects the compa
3.2 years ago by Kevin Blighe 89k
9,939 results • Page 5 of 199
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