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7
votes
2
replies
5.6k
views
Answer: A: Drug resistant vs. Drug sensitive data retreival from TCGA
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
3.2k
views
Comment: C: how to measure silhouette coefficient and Dunn index for Hierarchical Clustering
6.0 years ago by Kevin Blighe 90k
0
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1
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3.2k
views
Answer: C: how to measure silhouette coefficient and Dunn index for Hierarchical Clustering
6.0 years ago by Kevin Blighe 90k
3
votes
0
replies
1.6k
views
Comment: C: Regarding WGCNA gene expression data
6.0 years ago by Kevin Blighe 90k
0
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1
reply
20k
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Comment: C: Annotate Affymetrix probesets to Gene symbols
6.0 years ago by Kevin Blighe 90k
0
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1
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12k
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Comment: C: WGCNA pearson or bicor? Also, should I adjust module correlation Pvalues by Bonf
6.0 years ago by Kevin Blighe 90k
0
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0
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9.4k
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Comment: C: Pheatmap row annotation multiple categories
6.0 years ago by Kevin Blighe 90k
1
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0
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9.4k
views
Comment: C: Pheatmap row annotation multiple categories
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
11k
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Comment: C: Maths implications: log2 transformation before or after normalisation
6.0 years ago by Kevin Blighe 90k
1
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0
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11k
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Comment: A: Maths implications: log2 transformation before or after normalisation
6.0 years ago by Kevin Blighe 90k
0
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0
replies
2.4k
views
Comment: C: creating gtf file for bam file generated by Hisat2 using Stringtie
6.0 years ago by Kevin Blighe 90k
2
votes
1
reply
14k
views
Answer: C: PCA scatterplot with different shapes for different clusters
6.0 years ago by Kevin Blighe 90k
0
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1
reply
14k
views
Comment: C: PCA scatterplot with different shapes for different clusters
6.0 years ago by Kevin Blighe 90k
0
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0
replies
3.8k
views
Comment: C: plotEigengeneNetworks WGCNA add ME labels to left side of figure
6.0 years ago by Kevin Blighe 90k
0
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1
reply
5.7k
views
Comment: C: ClinCNV: CNV detection from short reads
6.0 years ago by Kevin Blighe 90k
0
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0
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5.5k
views
Comment: C: Raw reads from Ion Torrent. Is it single-end reads or paired-end reads.
6.0 years ago by Kevin Blighe 90k
2
votes
1
reply
5.7k
views
Comment: C: ClinCNV: CNV detection from short reads
6.0 years ago by Kevin Blighe 90k
0
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0
replies
2.4k
views
Comment: C: creating gtf file for bam file generated by Hisat2 using Stringtie
6.0 years ago by Kevin Blighe 90k
1
vote
1
reply
14k
views
Comment: C: PCA scatterplot with different shapes for different clusters
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
3.8k
views
Answer: A: plotEigengeneNetworks WGCNA add ME labels to left side of figure
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
3.8k
views
Comment: C: plotEigengeneNetworks WGCNA add ME labels to left side of figure
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
1.0k
views
Comment: C: Affymetrix cross platform probe matching
6.0 years ago by Kevin Blighe 90k
0
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1
reply
1.0k
views
Answer: C: Affymetrix cross platform probe matching
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
4.2k
views
Comment: C: Beta coefficient is positive, but potential SNP effect size is negative
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
20k
views
Comment: C: Annotate Affymetrix probesets to Gene symbols
6.0 years ago by Kevin Blighe 90k
2
votes
0
replies
2.4k
views
Comment: C: creating gtf file for bam file generated by Hisat2 using Stringtie
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.2k
views
Comment: C: Beta coefficient is positive, but potential SNP effect size is negative
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
4.5k
views
Comment: C: bcftools multiple samples
6.0 years ago by Kevin Blighe 90k
1
vote
3
replies
4.3k
views
Answer: A: Kmeans in R for clustering on significant gene list by sample
6.0 years ago by Kevin Blighe 90k
1
vote
1
reply
2.4k
views
Comment: C: creating gtf file for bam file generated by Hisat2 using Stringtie
6.0 years ago by Kevin Blighe 90k
4
votes
1
reply
1.5k
views
Answer: A: Require comprehensive tutorials for PCA analysis of microarray
6.0 years ago by Kevin Blighe 90k
64
votes
26
replies
17k
views
7 follow
Tutorial: Parallel processing in R
biocparallel mclapply foreach R
updated 2.7 years ago by 45k • written 8.2 years ago by 90k
0
votes
0
replies
1.4k
views
Comment: C: Problem in matching "days_to_last_followup" to the sample IDs in TCGA clinical f
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
5.3k
views
Answer: C: Which is the best r package for co expression analysis
6.0 years ago by Kevin Blighe 90k
1
vote
1
reply
4.1k
views
Comment: C: pheatmap and aheatmap give different results when using pearson correlation as d
6.0 years ago by Kevin Blighe 90k
1
vote
0
replies
2.4k
views
Comment: C: I have gene lists with fold changes/FDR from RNA-seq, what's the possible downst
6.0 years ago by Kevin Blighe 90k
4
votes
1
reply
17k
views
Comment: C: What's the difference between enrichKEGG and gseKEGG
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
6.8k
views
Comment: C: EnhancedVolcano: Error in unused argument
6.0 years ago by Kevin Blighe 90k
0
votes
0
replies
1.3k
views
Comment: C: Download multiple bacterial CDS from NCBI using Biopython
6.0 years ago by Kevin Blighe 90k
1
vote
0
replies
2.4k
views
Comment: C: I have gene lists with fold changes/FDR from RNA-seq, what's the possible downst
6.0 years ago by Kevin Blighe 90k
1
vote
1
reply
2.4k
views
Comment: C: I have gene lists with fold changes/FDR from RNA-seq, what's the possible downst
6.0 years ago by Kevin Blighe 90k
1
vote
1
reply
5.5k
views
Comment: C: How to enter gene list in R for WGCNA analysis
6.0 years ago by Kevin Blighe 90k
0
votes
1
reply
5.5k
views
Comment: C: How to enter gene list in R for WGCNA analysis
6.0 years ago by Kevin Blighe 90k
10,030 results • Page 71 of 201
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