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485
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Repeat expansion VCF from ONT RU field and displayRU differences with gnomAD STR dataset repeat units
VCF STRs annotation
3 months ago by ieie ▴ 20
0
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0
replies
322
views
FusionCatcher cases where gene1 and gene 2 have 2 matches
fusions fusioncatcher
4 months ago by ieie ▴ 20
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0
replies
401
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retrieve type translocation ,deletion, duplication with fusion RNA detection tools
fusions fusioncatcher arriba star
8 months ago by ieie ▴ 20
0
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1
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1.3k
views
Comment: Comment: Number of reads supporting a structural variant value in Dragen structural varia
10 months ago by ieie ▴ 20
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4
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1.3k
views
Number of reads supporting a structural variant value in Dragen structural variant calling output
Structural VCF variants Manta
updated 10 months ago by 4.2k • written 10 months ago by ▴ 20
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0
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1.7k
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Comment: Comment: prevalence and detection threshold of core microbiome
2.4 years ago by ieie ▴ 20
1
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2
replies
1.7k
views
prevalence and detection threshold of core microbiome
microbiome taxa
2.4 years ago by ieie ▴ 20
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0
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5.3k
views
Comment: Comment: bash script for merging R1 and R2 reads
3.4 years ago by ieie ▴ 20
0
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1
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5.3k
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Comment: Comment: bash script for merging R1 and R2 reads
3.4 years ago by ieie ▴ 20
0
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1
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5.3k
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Comment: Comment: bash script for merging R1 and R2 reads
3.4 years ago by ieie ▴ 20
0
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1
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5.3k
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Comment: Comment: bash script for merging R1 and R2 reads
3.4 years ago by ieie ▴ 20
0
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1
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5.3k
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Comment: Comment: bash script for merging R1 and R2 reads
3.4 years ago by ieie ▴ 20
4
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10
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5.3k
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bash script for merging R1 and R2 reads
fastq bash illumina
updated 2.7 years ago by 45k • written 3.4 years ago by ▴ 20
4
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4
replies
3.9k
views
bcftools consensus does not produce an output
genome bcftools
updated 5.3 years ago by • 0 • written 7.3 years ago by ▴ 20
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0
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1.2k
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Comment: C: demultiplexing fastq file in fastq files identified by tags
5.4 years ago by ieie ▴ 20
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2
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1.2k
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demultiplexing fastq file in fastq files identified by tags
next-gen sequencing
updated 5.4 years ago by 154k • written 5.4 years ago by ▴ 20
0
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3
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2.5k
views
demultiplex PacBio fastq file
next-gen-sequencing sequence
updated 2.4 years ago by 45k • written 5.5 years ago by ▴ 20
0
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0
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813
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ghost-tree scaffold hybrid-tree-foundation-tree error
alignment next-gen
5.8 years ago by ieie ▴ 20
0
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0
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789
views
building phylogeny using a back bone tree
alignment sequence next-gen
5.9 years ago by ieie ▴ 20
0
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0
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1.1k
views
Comment: C: downloading a set of sequences from Genbank using the species names
6.0 years ago by ieie ▴ 20
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3
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1.1k
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downloading a set of sequences from Genbank using the species names
sequence gene genbank
6.0 years ago by ieie ▴ 20
0
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0
replies
758
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phagorn:phydat no species name returned
alignment phylogeny phagorn
6.0 years ago by ieie ▴ 20
0
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1
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2.6k
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Comment: C: bwa mem low depth and fluctuating plot
7.1 years ago by ieie ▴ 20
1
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8
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2.6k
views
bwa mem low depth and fluctuating plot
bwa mem samtools
updated 7.1 years ago by ▴ 110 • written 7.1 years ago by ▴ 20
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0
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2.6k
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Comment: C: bwa mem low depth and fluctuating plot
7.1 years ago by ieie ▴ 20
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0
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2.6k
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Comment: C: bwa mem low depth and fluctuating plot
7.1 years ago by ieie ▴ 20
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0
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4.4k
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Comment: C: R1 and R2 matching
7.2 years ago by ieie ▴ 20
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0
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4.4k
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Comment: C: R1 and R2 matching
7.2 years ago by ieie ▴ 20
0
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1
reply
4.4k
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Comment: C: R1 and R2 matching
7.2 years ago by ieie ▴ 20
0
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8
replies
4.4k
views
R1 and R2 matching
next-gen bwa
updated 7.2 years ago by 154k • written 7.2 years ago by ▴ 20
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1
reply
22k
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Comment: C: Alignment with BWA and SAMtools
7.3 years ago by ieie ▴ 20
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0
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2.6k
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Comment: C: bcftools consensus sequence shorter than reference
7.3 years ago by ieie ▴ 20
1
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3
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2.6k
views
bcftools consensus sequence shorter than reference
genome bcftools
7.3 years ago by ieie ▴ 20
0
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0
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3.9k
views
Comment: C: bcftools consensus does not produce an output
7.3 years ago by ieie ▴ 20
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0
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5.9k
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Comment: C: bwa-mem, from .sam/.bam to fasta file
7.3 years ago by ieie ▴ 20
0
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1
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5.9k
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Comment: C: bwa-mem, from .sam/.bam to fasta file
7.3 years ago by ieie ▴ 20
0
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1
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5.9k
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Comment: C: bwa-mem, from .sam/.bam to fasta file
7.3 years ago by ieie ▴ 20
0
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1
reply
5.9k
views
Comment: C: bwa-mem, from .sam/.bam to fasta file
7.3 years ago by ieie ▴ 20
0
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0
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5.9k
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Comment: C: bwa-mem, from .sam/.bam to fasta file
7.3 years ago by ieie ▴ 20
6
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14
replies
5.9k
views
bwa-mem, from .sam/.bam to fasta file
bwa samtools
7.3 years ago by ieie ▴ 20
0
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0
replies
1.3k
views
Variation partitioning using latitude and longitude as explanatory variables
R vegan
7.8 years ago by ieie ▴ 20
0
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2
replies
2.2k
views
quality filtering error usearch
next-gen
updated 7.9 years ago by ★ 1.1k • written 8.0 years ago by ▴ 20
0
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0
replies
7.8k
views
Comment: C: install obitools error
8.0 years ago by ieie ▴ 20
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0
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3.8k
views
Comment: C: cutadapt and vsearch script to process a set of files
8.0 years ago by ieie ▴ 20
0
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0
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3.8k
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Comment: C: cutadapt and vsearch script to process a set of files
8.0 years ago by ieie ▴ 20
0
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1
reply
3.8k
views
Comment: C: cutadapt and vsearch script to process a set of files
8.0 years ago by ieie ▴ 20
0
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1
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3.8k
views
Comment: C: cutadapt and vsearch script to process a set of files
8.0 years ago by ieie ▴ 20
1
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7
replies
3.8k
views
cutadapt and vsearch script to process a set of files
next-gen
8.0 years ago by ieie ▴ 20
0
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1
reply
3.8k
views
Comment: A: fastx toolkit error
updated 8.1 years ago by 154k • written 8.1 years ago by ▴ 20
0
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0
replies
3.8k
views
Comment: C: fastx toolkit error
8.1 years ago by ieie ▴ 20
51 results • Page 1 of 2
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