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Comment: Comment: biomaRt: Timeout on getBM().
4.4 years ago by swbarnes2 15k
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2
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2.0k
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Comment: Comment: STAR errors out during alignment
4.4 years ago by swbarnes2 15k
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1
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2.1k
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Comment: Comment: Is it possible to remove overrepresented sequence from trimgalore?
4.4 years ago by swbarnes2 15k
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2.2k
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Comment: Comment: Create matrix from ReadsPerGene.out.tab files
4.4 years ago by swbarnes2 15k
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7.0k
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Answer: Answer: Searching a venn diagram online tool
4.4 years ago by swbarnes2 15k
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2.3k
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Comment: Comment: Issue with htseq-count in Ubuntu
4.4 years ago by swbarnes2 15k
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2.3k
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Comment: Comment: Issue with htseq-count in Ubuntu
4.4 years ago by swbarnes2 15k
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886
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Comment: Comment: Degenerate Primer Sequence Recovery
4.4 years ago by swbarnes2 15k
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2.7k
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Comment: Comment: Aligning two fasta files with multiple sequences
4.4 years ago by swbarnes2 15k
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3.6k
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Answer: Answer: Normalization and Batch Effect of bulk RNA-Seq
4.4 years ago by swbarnes2 15k
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1.5k
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Comment: Comment: Samtools pileup extract read length for position
4.4 years ago by swbarnes2 15k
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2.7k
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Comment: Comment: sequencing adapter/ index when mixing two library preparation kit
4.4 years ago by swbarnes2 15k
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1.5k
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Comment: Comment: How can download and read BAM and FASTQ format
4.4 years ago by swbarnes2 15k
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1
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1.3k
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Comment: Comment: how can I get alignment quality from bam index file?
4.4 years ago by swbarnes2 15k
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1
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2.6k
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Comment: Comment: How to view if a gene is protein-coding?
4.4 years ago by swbarnes2 15k
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1.5k
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Answer: Answer: SortSam Error after BWA alignment
4.4 years ago by swbarnes2 15k
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3.0k
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Comment: Comment: Bioinformatics
4.4 years ago by swbarnes2 15k
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1
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2.0k
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Comment: Comment: Detection of heterozygous exon deletion by Sanger and Long-Range PCR
4.4 years ago by swbarnes2 15k
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0
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1.1k
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Answer: Answer: downloading fastq files from galaxy
4.4 years ago by swbarnes2 15k
0
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1
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1.8k
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Comment: Comment: DEseq2: comparison the same when reversing factor order?
4.4 years ago by swbarnes2 15k
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1
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1.8k
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Answer: Answer: DEseq2: comparison the same when reversing factor order?
4.4 years ago by swbarnes2 15k
1
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1
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2.7k
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Comment: Comment: sequencing adapter/ index when mixing two library preparation kit
4.4 years ago by swbarnes2 15k
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1
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2.2k
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Answer: Answer: Using RefSeq gene annotation file to determine gene lengths
4.4 years ago by swbarnes2 15k
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0
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1.7k
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Comment: Comment: Convert BAM files to FastQ
4.4 years ago by swbarnes2 15k
1
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1
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6.7k
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Comment: Comment: Volcano plot from a RNAseq excel file
updated 4.4 years ago by 45k • written 4.4 years ago by 15k
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3.3k
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Comment: Comment: How to find the fasta file with maxium number of amino acids?
4.4 years ago by swbarnes2 15k
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0
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3.3k
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Comment: Comment: How to find the fasta file with maxium number of amino acids?
4.4 years ago by swbarnes2 15k
0
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1
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2.0k
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Answer: Answer: Detection of heterozygous exon deletion by Sanger and Long-Range PCR
4.4 years ago by swbarnes2 15k
0
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0
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3.7k
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Comment: Comment: Bowtie2 problem when use aligned or unaligned output file for re-alignment
4.4 years ago by swbarnes2 15k
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0
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1.2k
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Comment: Comment: How can I use a short sequence as a probe to fish out sequences have the same pa
4.4 years ago by swbarnes2 15k
0
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1
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2.7k
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Answer: Answer: sequencing adapter/ index when mixing two library preparation kit
4.4 years ago by swbarnes2 15k
0
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0
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3.1k
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Comment: Comment: cutadapt: error: unused arguments //not recognizing my sequences when using a lo
4.4 years ago by swbarnes2 15k
0
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0
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3.1k
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Comment: Comment: what are the reasons to find so few Differentially expressed genes (DEGs)?
4.4 years ago by swbarnes2 15k
1
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0
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1.2k
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Comment: Comment: merging fasta sequences into a single fasta sequence in large file
4.4 years ago by swbarnes2 15k
0
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1
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3.7k
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Comment: Comment: Bowtie2 problem when use aligned or unaligned output file for re-alignment
4.4 years ago by swbarnes2 15k
3
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0
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1.9k
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Answer: Answer: Should I remove an overrepresented sequence from one Fastq file from my RNA Seq
4.4 years ago by swbarnes2 15k
1
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0
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3.7k
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Comment: Comment: Bowtie2 problem when use aligned or unaligned output file for re-alignment
4.4 years ago by swbarnes2 15k
2
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1
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3.7k
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Answer: Answer: Bowtie2 problem when use aligned or unaligned output file for re-alignment
4.4 years ago by swbarnes2 15k
0
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0
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3.0k
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Answer: Answer: Velocyto: Not found cell and umi barcode in entry of the bam file
4.4 years ago by swbarnes2 15k
0
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0
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3.9k
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Answer: Answer: trouble with 'too short' reads using STAR. each mate maps fine, but the paired e
4.4 years ago by swbarnes2 15k
0
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0
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3.1k
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Comment: Comment: Why do I lose sequences when converting my bam files into fastq?
4.4 years ago by swbarnes2 15k
1
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2
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3.1k
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Answer: Answer: Why do I lose sequences when converting my bam files into fastq?
4.4 years ago by swbarnes2 15k
0
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0
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754
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Answer: Answer: Strandedness of RNAseq data from SAM alignment flag
4.4 years ago by swbarnes2 15k
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0
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850
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Answer: Answer: Differential Expression Analysis Using RPKM
4.5 years ago by swbarnes2 15k
0
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1
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5.5k
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Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
4.5 years ago by swbarnes2 15k
1
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1
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5.5k
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Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
4.5 years ago by swbarnes2 15k
1
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1
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5.5k
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Answer: Answer: Trim bam file reads to remove all nucleotide over a certain length
4.5 years ago by swbarnes2 15k
0
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0
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15k
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Answer: Answer: Extract rows name in R
4.5 years ago by swbarnes2 15k
0
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0
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3.8k
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Comment: Comment: Convert MSTRG gene IDs to real one?
4.5 years ago by swbarnes2 15k
0
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1
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3.9k
views
Comment: Comment: RNAseq: units (TPM +0.001).
4.5 years ago by swbarnes2 15k
2,124 results • Page 15 of 43
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