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Microbiome / metagenomics databases
microbiome database metagenomics
2.8 years ago by erwan.scaon ▴ 960
0
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1
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112k
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Comment: Comment: Number of mapped reads from BAM file
2.8 years ago by erwan.scaon ▴ 960
0
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0
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674
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Enterotypes - Get raw data from E. Le Chatelier et al., 2013
Enterotypes MGnify
updated 2.5 years ago by 45k • written 3.3 years ago by ▴ 960
2
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1
reply
2.2k
views
Answer: Answer: How to select rows in a column and add a zero to selected rows
3.7 years ago by erwan.scaon ▴ 960
2
votes
4
replies
6.5k
views
blast culling_limit option behavior
blastn alignment culling_limit
updated 4.0 years ago by ▴ 20 • written 8.8 years ago by ▴ 960
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0
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1.3k
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Comment: C: Extract all seqs bewteen two seqs ID in Fastq
5.2 years ago by erwan.scaon ▴ 960
0
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1
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1.3k
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Comment: C: Extract all seqs bewteen two seqs ID in Fastq
5.2 years ago by erwan.scaon ▴ 960
0
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4
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1.3k
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Extract all seqs bewteen two seqs ID in Fastq
fastq awk sed
updated 5.2 years ago by 166k • written 5.2 years ago by ▴ 960
2
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1
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2.3k
views
Answer: A: Algorithm based differences between Mutect2 and Haplotypecaller?
6.1 years ago by erwan.scaon ▴ 960
1
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0
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14k
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Answer: A: Genome assembly statistical tools
6.1 years ago by erwan.scaon ▴ 960
0
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4
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3.3k
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Diffbind error : sequences from an unspecified genome; no seqlengths
Diffbind MACS2 GRanges MACS ChIP-Seq
updated 6.1 years ago by • 0 • written 7.5 years ago by ▴ 960
1
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0
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4.3k
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Answer: A: choose between normalization techniques for OTU counts
6.5 years ago by erwan.scaon ▴ 960
0
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1
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2.9k
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Answer: A: DESEQ2 size factors change when number of samples change in the design
6.8 years ago by erwan.scaon ▴ 960
0
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0
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1.1k
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Find the closest Salmonella complete genome (starting with a NGS sample from a single Salmonella strain)
salmonella strainseeker snippy
6.9 years ago by erwan.scaon ▴ 960
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0
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3.6k
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Comment: C: strandness of paired-end data
6.9 years ago by erwan.scaon ▴ 960
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0
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4.3k
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Comment: C: edirect esearch : exclude given accessions
6.9 years ago by erwan.scaon ▴ 960
0
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0
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4.3k
views
Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
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1
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4.3k
views
Answer: A: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
3
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20
replies
4.3k
views
edirect esearch : exclude given accessions
edirect esearch ncbi
7.0 years ago by erwan.scaon ▴ 960
0
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1
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4.3k
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Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
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1
reply
4.3k
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Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
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1
reply
4.3k
views
Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
votes
1
reply
4.3k
views
Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
votes
1
reply
4.3k
views
Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
votes
1
reply
4.3k
views
Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
votes
0
replies
4.3k
views
Comment: C: edirect esearch : exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
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0
replies
4.3k
views
Comment: C: Edirect esearch exclude given accessions
7.0 years ago by erwan.scaon ▴ 960
0
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1
reply
112k
views
Comment: C: Number of mapped reads from BAM file
7.1 years ago by erwan.scaon ▴ 960
0
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0
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12k
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Answer: A: Fasta file filtering
7.3 years ago by erwan.scaon ▴ 960
1
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0
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4.0k
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Comment: C: Parsing Blast output on linux/unix
7.3 years ago by erwan.scaon ▴ 960
0
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1
reply
9.3k
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Comment: C: Kallisto TPM values
7.3 years ago by erwan.scaon ▴ 960
0
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1
reply
2.4k
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Comment: C: Search only plasmids from NT database using local BLAST
7.3 years ago by erwan.scaon ▴ 960
1
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1
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2.4k
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Comment: C: Search only plasmids from NT database using local BLAST
7.3 years ago by erwan.scaon ▴ 960
2
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0
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4.0k
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Comment: C: Identifying CNVs from targeted amplicon sequencing
7.3 years ago by erwan.scaon ▴ 960
0
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1
reply
9.3k
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Comment: C: Kallisto TPM values
7.3 years ago by erwan.scaon ▴ 960
1
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1
reply
1.7k
views
Comment: C: Please suggest your idea for variant calling analysis of many BAM files from who
7.4 years ago by erwan.scaon ▴ 960
0
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0
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7.2k
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Comment: A: STAR options for RNA Seq
7.4 years ago by erwan.scaon ▴ 960
0
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1
reply
3.4k
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Comment: C: How to make a custom gtf or gff3 file with a list containing transcript loci
7.4 years ago by erwan.scaon ▴ 960
0
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0
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2.9k
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Comment: C: extracting sequence from fast file
7.4 years ago by erwan.scaon ▴ 960
0
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0
replies
2.0k
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Comment: C: How to convert a LONG list of Genbank accession numbers for mRNA variants to a l
7.4 years ago by erwan.scaon ▴ 960
2
votes
0
replies
28k
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Comment: C: Is there a tool that sorts gtf files?
7.5 years ago by erwan.scaon ▴ 960
2
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1
reply
28k
views
Comment: C: Is there a tool that sorts gtf files?
7.5 years ago by erwan.scaon ▴ 960
7
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3
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28k
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Answer: A: Is there a tool that sorts gtf files?
7.5 years ago by erwan.scaon ▴ 960
1
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1
reply
5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
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0
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5.6k
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Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
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1
reply
5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
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1
reply
5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
11
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28
replies
5.6k
views
ChIP-Seq samples : FASTQ quality control
ChIP-Seq QC
7.5 years ago by erwan.scaon ▴ 960
0
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1
reply
5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
votes
1
reply
5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
100 results • Page 1 of 2
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