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Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
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5.6k
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Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
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1
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5.6k
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Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
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1
reply
5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
votes
0
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5.6k
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Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
votes
1
reply
5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
7.5 years ago by erwan.scaon ▴ 960
0
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1
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5.6k
views
Comment: C: ChIP-Seq samples : FASTQ quality control
updated 7.5 years ago by 153k • written 7.5 years ago by ▴ 960
1
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1
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6.6k
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Comment: C: RefSeq ID to TaxID?
7.5 years ago by erwan.scaon ▴ 960
0
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0
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3.3k
views
Comment: C: Diffbind error : sequences from an unspecified genome; no seqlengths
7.5 years ago by erwan.scaon ▴ 960
0
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0
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3.1k
views
Comment: C: IGV - is there a way to extract bulk information?
7.5 years ago by erwan.scaon ▴ 960
0
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1
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6.1k
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Comment: C: Pipeline for hybrid genome assembly of long and short reads AND how to deal with
7.5 years ago by erwan.scaon ▴ 960
1
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1
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9.7k
views
Answer: A: parsing vcf file
7.6 years ago by erwan.scaon ▴ 960
0
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0
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2.9k
views
Comment: C: Refseq human reference transcriptome link for RNA-seq differential expression an
7.6 years ago by erwan.scaon ▴ 960
1
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1
reply
4.5k
views
Comment: C: Kallisto read count processed does not tally
7.6 years ago by erwan.scaon ▴ 960
1
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1
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4.6k
views
Comment: C: CosmicCodingMuts.vcf.gz for hg38?
7.6 years ago by erwan.scaon ▴ 960
0
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0
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5.6k
views
Comment: C: Saving IGV images for bigwig files
7.6 years ago by erwan.scaon ▴ 960
3
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1
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6.1k
views
Answer: A: how to annotate RNA-seq
7.7 years ago by erwan.scaon ▴ 960
5
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0
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12k
views
Answer: A: How to convert gff file to a csv file
7.7 years ago by erwan.scaon ▴ 960
2
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0
replies
16k
views
Answer: A: biomaRt mmusculus_gene_ensembl dataset
7.8 years ago by erwan.scaon ▴ 960
0
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1
reply
16k
views
Comment: C: biomaRt mmusculus_gene_ensembl dataset
7.8 years ago by erwan.scaon ▴ 960
0
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1
reply
1.5k
views
Comment: C: Balanced, nonredundant set of bacterial genomes
7.8 years ago by erwan.scaon ▴ 960
0
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1
reply
2.8k
views
Trying to map informations between two Mus musculus strains with biomaRt external_gene_name field
biomaRt 129S1/SvImJ external_gene_name ensembl
updated 7.8 years ago by ★ 2.1k • written 7.8 years ago by ▴ 960
30
votes
1
reply
19k
views
Read pair orientation : Illumina TruSeq Stranded mRNA library
featureCounts TruSeq strandSpecific
updated 7.8 years ago by 13k • written 7.8 years ago by ▴ 960
0
votes
6
replies
2.9k
views
Looking for a thorough annotation for non-primary assembly units in GRCm38
GRCm38 mus musculus GTF GFF GENCODE
7.8 years ago by erwan.scaon ▴ 960
0
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0
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2.9k
views
Comment: C: Looking for a thorough annotation for non-primary assembly units in GRCm38
7.8 years ago by erwan.scaon ▴ 960
0
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1
reply
2.9k
views
Comment: C: Looking for a thorough annotation for non-primary assembly units in GRCm38
7.8 years ago by erwan.scaon ▴ 960
0
votes
1
reply
2.9k
views
Comment: C: Looking for a thorough annotation for non-primary assembly units in GRCm38
7.8 years ago by erwan.scaon ▴ 960
3
votes
1
reply
3.6k
views
Answer: A: Discrepancy between abundance.tsv and tx2gene.csv
7.8 years ago by erwan.scaon ▴ 960
2
votes
0
replies
2.2k
views
Answer: A: Tools for Copy Number Variation analysis from ion Proton data.
7.8 years ago by erwan.scaon ▴ 960
0
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1
reply
2.2k
views
Comment: C: local blastn against one subgroup of species
7.9 years ago by erwan.scaon ▴ 960
0
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1
reply
6.3k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.9 years ago by erwan.scaon ▴ 960
0
votes
1
reply
6.3k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.9 years ago by erwan.scaon ▴ 960
1
vote
1
reply
6.3k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.9 years ago by erwan.scaon ▴ 960
0
votes
1
reply
6.3k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.9 years ago by erwan.scaon ▴ 960
0
votes
1
reply
6.3k
views
Comment: C: Trying to match Accession numbers to Taxonomy IDs
7.9 years ago by erwan.scaon ▴ 960
0
votes
0
replies
6.3k
views
Answer: A: Trying to match Accession numbers to Taxonomy IDs
7.9 years ago by erwan.scaon ▴ 960
0
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0
replies
16k
views
Comment: C: Visualize Strand-Specific Rna-Seq : How To Differentiate Strands
8.0 years ago by erwan.scaon ▴ 960
0
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0
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8.4k
views
Comment: C: Obtain full taxonomic hierarchy from multiple species names
8.0 years ago by erwan.scaon ▴ 960
1
vote
0
replies
5.0k
views
Comment: C: STAR mapper: unrecoginzed parameter name "sjdbInsertSave" in input "genomeParame
8.2 years ago by erwan.scaon ▴ 960
0
votes
1
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5.0k
views
Answer: A: STAR mapper: unrecoginzed parameter name "sjdbInsertSave" in input "genomeParame
8.2 years ago by erwan.scaon ▴ 960
2
votes
1
reply
5.3k
views
Answer: A: Retrieve genbank viral genomes
8.2 years ago by erwan.scaon ▴ 960
12
votes
4
replies
5.3k
views
Retrieve genbank viral genomes
ncbi genbank viral-genome
updated 2.5 years ago by 45k • written 8.2 years ago by ▴ 960
18
votes
6
replies
11k
views
COSMIC vcf file compatibility for Mutect2
GATK Mutect2 COSMIC VCF
8.4 years ago by erwan.scaon ▴ 960
5
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0
replies
11k
views
Answer: A: COSMIC vcf file compatibility for Mutect2
8.4 years ago by erwan.scaon ▴ 960
0
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0
replies
6.1k
views
Answer: A: GATK BaseRecalibrator - Input files knownSites and reference have incompatible c
8.6 years ago by erwan.scaon ▴ 960
8
votes
4
replies
11k
views
Answer: A: COSMIC vcf file compatibility for Mutect2
8.6 years ago by erwan.scaon ▴ 960
0
votes
0
replies
6.5k
views
Comment: A: blast culling_limit option behavior
8.8 years ago by erwan.scaon ▴ 960
5
votes
3
replies
6.9k
views
Quality control for Ion Torrent
sequencing
updated 8.9 years ago by 9.8k • written 8.9 years ago by ▴ 960
1
vote
0
replies
8.1k
views
Answer: A: Tools For De Novo Assembly For Exome Sequencing Data
12.9 years ago by erwan.scaon ▴ 960
3
votes
1
reply
7.9k
views
Answer: A: Existing Tools For Building A De Bruijn Graph From Raw Reads
13.2 years ago by erwan.scaon ▴ 960
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